Gene

KWMTBOMO10066

Pre Gene Modal

BGIBMGA005539

Annotation

putative_chitinase_3_[Papilio_xuthus]

Location

Bomo_Chr17(+):1664430-1717921      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 1.436

CDS

ATGGCGTATTCATATCGGCCACCGATATTGCTTCGATGGATGCTCACCGTGGTTCTGGTCATAGCTGTCATCGCTCCCACGTCAGACTCAACAACTGTCCGCAGAAGACTCCGGAAGCCATCAAAGGTGTCCACATCGGTTTCGTCCAGCGTCTCTAGATCCACAGATCAAGTTCTCTCAGCTAGCGTGAACAGACCAAAGATTCGTGGTCGTCCTTCAATAGCCAGTAGAAAATCATCCGCGGCTCTGGACAACTCCGTCACCACCGAACATCACAAAGATAAGGATGGATACAAGATCGTCTGCTATTACACCAACTGGTCCCAATACCGGACGAAGGTCGGGAAGTTCGTTCCAGAGGACATTCAGCCCGATCTCTGCACCCACATCATCTTCGCTTTCGGCTGGCTGAAGAAAGGAAAACTGAGCAGCTTCGAATCGAACGATGAGACGAAAGACGGGAAGACAGGACTGTACGACAAGATTAATGGGCTGAAGAAAGGGAATCCTAAACTAAAGACTCTATTGGCCATTGGCGGTTGGTCTTTCGGGACTCAGAAGTTCAAGGACATGGTGGCTACCAGATACGCCCGGCAGACGTTCATCTACTCCGCGATTCCTTACTTGAGGGACAGGAACTTTGACGGGCTCGACATCGACTGGGAATACCCCAAGGGTGGAGACGACAAGAAAAACTACGTGCTCCTGTTGAAAGAGCTCCGTGAGGCCTTCGAAGCGGAGGCTCAAGAAGTGAAGAAACCTCGTTTGCTTCTTACTGCAGCTGTGCCAGTTGGACCTGACAACATCAAGAGCGGATACGACGTTCCTGCTGTAGCCAGCTATCTGGACTTCATCAACCTTATGGCCTACGACTTCCACGGCAAATGGGAGAGGGAGACCGGCCACAACGCCCCGCTGTACGCTCCATCGACAGACTCGGAGTGGAGGAAGCAACTATCAGTAGACCACGCAGCACATCTCTGGGTGAAACTTGGAGCCCCGAAGGACAAACTTATTATTGGTATGCCAACATATGGACGTACATTCACGCTCTCCAACCCTAATAACTTCAAAGTGAACGCGCCGGCCAGTGGTGGAGGAAAAGCGGGAGAGTACACCAAGGAAAGCGGTTTCCTCGCTTACTATGAGGTGTGCGAAATGCTAAGGAACGGGGGTGCCTACGTCTGGGACGATGAAATGAAAGTCCCTTACTGCGTCCACGGGGACCAGTGGGTCGGATTCGACGATGAGAAATCAATCAGGAACAAAATGAGGTGGATCAAAGACAATGGCTTCGGAGGAGCAATGGTGTGGACCGTTGATATGGACGACTTCTCCGGCAACGTCTGCGGCGGCGATGTAAAGTATCCATTGATCGGTGCAATGAGGGAAGAACTCCGAGGTATATCTCGAGGTAAAGACGCCAAAGATGTCGACTGGGCCACGGTTGCTTCCAGCATAGTGATAGAAGAAACTGAGAAACCAGAACCGATACAGGTTCCATTGTCCGAAGTCCTCAAGCGCATCAAGAAGCCTGGTAAAAACGTCATCATAAAGACCAATGGAGCGGCACTTTCAGATAAAAACAAACGCGAGCCCCAAGTACTCTGTTATCTCACATCCTGGTCAGCCAAACGTCCAAGCGCAGGCCGCTTCACACCAGAAAACGTTGACCCCAAACTCTGTACCCACATCATATACGCTTTCGCAACCCTCAAAGACCACAAGCTAGCTGAAGCTGACGACAAAGACGCTGATATGTACGATAAAGTCGTTGCGTTGAGAGAGAAGAACCCCAATTTGAAGATATTGCTCGCCATCGGAGGCTGGGCCTTCGGATCTACTCCGTTCAAAGAATTGACTTCGAACGTGTTCCGCATGAACCAGTTCGTGTATGAAGCCATCGAGTTCCTCCGCGACTATCAGTTCAATGGCTTGGACGTGGATTGGGAATATCCTAGAGGAGCAGATGATCGTGCAGCATTCGTATCTCTGCTCAAGGAATTGCGTCTGGCGTTCGAGGGTGAAGCCAAGACTTCAGGTCAGCCCCGGCTCCTGCTCACTGCTGCTGTACCGGCGTCGTTTGAGGCCATCGCCGCCGGATATGATGTACCGGAAATATCGAAATATTTGGACTTCATAAACGTGATGACGTATGACTTCCACGGCCAGTGGGAGCGCCAGGTCGGCCACAACAGTCCGCTGTTCCCTCTAGAAAGCGCCACGAGCTACCAGAAGAAACTAACTGTGGACTACTCCGCCCGCGAGTGGGTCCGCCAGGGCGCCCCCAAAGAGAAGCTGATGATCGGCATGCCCACGTACGGAAGGTCCTTCACGCTTATCAACGAAACACAGTACGACATCGGCGCTCCGGCTTCAGAGGGCGGAGAAGCCGGACGTTTCACCAACGAAGCCGGCTTCATGTCCTACTACGAAATCTGCGAGTTCCTACGAGAGGACAACACGACGCTCGTCTGGGACAACGAGCAGATGGTGCCATTCGCTTACCGAGGCGACCAGTGGGTCGGGTTCGACGACGAGAGATCGCTTAAAACAAAAATGGCCTGGCTGAAGGAAGAAGGGTTCGGCGGGATCATGGTCTGGTCTGTCGACATGGACGACTTCCGCGGCTCCTGTGGAACTGGCAAGTTCCCGCTCATCACGACCATGAAGCAGGAACTGTCCGACTACAAGGTCAAGCTGGAATACGACGGGCCCTACGAGACGGTGCTCACCAGCGGACAGTACACCACTAAGGACCCCACTGAGGTGACGTGCGAGGAGGAGGACGGCCACATCTCGTACCACAAGGACCAGGCGGACTGCACCATGTACTACATGTGCGAGGGCGAGCGGAAGCACCACATGCCGTGCCCCTCCAACCTCGTGTTCAACCCCAACGAGAACGTCTGCGATTGGCCGGAGAACGTGGAGGGATGCGCGCACCACACGCAGGCGCCGCCCGCCAGACGATAG

Protein

MAYSYRPPILLRWMLTVVLVIAVIAPTSDSTTVRRRLRKPSKVSTSVSSSVSRSTDQVLSASVNRPKIRGRPSIASRKSSAALDNSVTTEHHKDKDGYKIVCYYTNWSQYRTKVGKFVPEDIQPDLCTHIIFAFGWLKKGKLSSFESNDETKDGKTGLYDKINGLKKGNPKLKTLLAIGGWSFGTQKFKDMVATRYARQTFIYSAIPYLRDRNFDGLDIDWEYPKGGDDKKNYVLLLKELREAFEAEAQEVKKPRLLLTAAVPVGPDNIKSGYDVPAVASYLDFINLMAYDFHGKWERETGHNAPLYAPSTDSEWRKQLSVDHAAHLWVKLGAPKDKLIIGMPTYGRTFTLSNPNNFKVNAPASGGGKAGEYTKESGFLAYYEVCEMLRNGGAYVWDDEMKVPYCVHGDQWVGFDDEKSIRNKMRWIKDNGFGGAMVWTVDMDDFSGNVCGGDVKYPLIGAMREELRGISRGKDAKDVDWATVASSIVIEETEKPEPIQVPLSEVLKRIKKPGKNVIIKTNGAALSDKNKREPQVLCYLTSWSAKRPSAGRFTPENVDPKLCTHIIYAFATLKDHKLAEADDKDADMYDKVVALREKNPNLKILLAIGGWAFGSTPFKELTSNVFRMNQFVYEAIEFLRDYQFNGLDVDWEYPRGADDRAAFVSLLKELRLAFEGEAKTSGQPRLLLTAAVPASFEAIAAGYDVPEISKYLDFINVMTYDFHGQWERQVGHNSPLFPLESATSYQKKLTVDYSAREWVRQGAPKEKLMIGMPTYGRSFTLINETQYDIGAPASEGGEAGRFTNEAGFMSYYEICEFLREDNTTLVWDNEQMVPFAYRGDQWVGFDDERSLKTKMAWLKEEGFGGIMVWSVDMDDFRGSCGTGKFPLITTMKQELSDYKVKLEYDGPYETVLTSGQYTTKDPTEVTCEEEDGHISYHKDQADCTMYYMCEGERKHHMPCPSNLVFNPNENVCDWPENVEGCAHHTQAPPARR

Similarity

Belongs to the glycosyl hydrolase 18 family.

Uniprot

U5LUV7   A0A194QAT6   I1VX14   A0A221LFZ8   A0A2H4Z0A2   I6QMM8   + More
A0A2A4J3B9   A0A194QTM7   A0A2J7QAA7   D2A576   Q0Z942   A0A1B6CMH7   A0A067RC35   A0A0C5CUE1   A0A182WWE3   A0A182L3S0   Q7QIJ1   E0VH87   A0A084VDZ0   A0A182N9E9   A0A182Y814   A0A182I6M1   A0A182VKK7   A0A182LZT7   A0A182TW87   A0A182KCD4   A0A182WBE5   W5JDL8   A0A182IMA2   A0A182RJG7   A0A182QSR0   A0A2S2Q2H3   A0A182FGQ4   A0A2H8TNI6   B0X022   Q17BM9   A0A1Q3FMV9   A0A1Q3FMW1   J9K0Y5   A0A2H4Z2U0   A0A2K8JRQ5   A0A0A9WC72   E2B3W5   A0A195F5G8   A0A2I6Q763   A0A151X836   F4WXH8   A0A195DB08   A0A1B0D2K6   A0A195AY20   E2AH26   A0A195C1V2   A0A158NS63   A0A1V0QBC4   A0A154P9H9   A0A336MKJ0   T1IFA7   A0A0C9RP99   A0A2A3ENV6   A0A088AAP6   A0A1J1J5Q0   A0A1W4W1Q5   A0A0K8WKW5   E9JBY3   A0A0M9A9W5   A0A1A9X2U9   A0A1I8N4R4   A0A0J7KXG8   A0A2Z2Z004   A0A0L0CEG1   A0A1I8PQ66   K7IWS2   A0A0L7QRF8   B4N6I7   B3M7E5   B4KWS7   B3NF27   Q9VZV2   B4QP18   A0A0A1X9V2   Q29E30   B4PCV6   B4PCV5   A0A3B0J5V4   B4LGX0   U4U9T5   N6U4J9   A0A1B0AD34   B4HTJ6   A0A1A9VSK3   A0A1A9Y2B6   A0A1B0B9H1   A0A0M5IYA4   A0A2P8XG74   A0A069DWM4   A0A182PIM9   A0A182H9P8   A0A212FNA5   B4H407   A0A2S2NVJ0  

Pubmed

29372897    26354079    30578597    18362917    19820115    18342250    + More
24845553    25224926    20966253    12364791    14747013    17210077    20566863    24438588    25244985    20920257    23761445    17510324    25401762    27192063    26823975    20798317    29236932    21719571    21347285    28363844    21282665    25315136    26108605    20075255    17994087    18057021    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    22936249    25830018    15632085    17550304    23537049    29403074    26334808    26483478    22118469   

EMBL

KF318218    AGX32025.1    KQ459232    KPJ02577.1    JQ417265    MH899218    + More
AFI55112.1    AZS52294.1    KX668138    ASM94207.1    MG551526    AUF40393.1    JQ653039    AFM38213.1    NWSH01003324    PCG66555.1    KQ461155    KPJ08355.1    NEVH01016331    PNF25507.1    KQ971361    EFA05323.2    DQ659247    ABG47445.1    GEDC01022730    JAS14568.1    KK852804    KDR16263.1    KM217115    AJO25042.1    AAAB01008807    EAA04006.4    DS235164    EEB12743.1    ATLV01011963    KE524742    KFB36184.1    APCN01003668    AXCM01001639    ADMH02001833    ETN60985.1    AXCN02000560    GGMS01002671    MBY71874.1    GFXV01003929    MBW15734.1    DS232225    EDS37897.1    CH477319    EAT43684.1    GFDL01006125    JAV28920.1    GFDL01006140    JAV28905.1    ABLF02038822    KY576032    AUF41626.1    KY030969    ATU82720.1    KT717329    GBHO01037567    GBRD01008704    GDHC01007234    ANC95003.1    JAG06037.1    JAG57117.1    JAQ11395.1    GL445407    EFN89634.1    KQ981805    KYN35631.1    KY274433    AUM84818.1    KQ982431    KYQ56499.1    GL888424    EGI61144.1    KQ981042    KYN10100.1    AJVK01022918    KQ976716    KYM76839.1    GL439470    EFN67257.1    KQ978344    KYM94854.1    ADTU01002189    ADTU01002190    ADTU01002191    ADTU01002192    ADTU01002193    KY290391    ARE59262.1    KQ434850    KZC08569.1    UFQS01001413    UFQT01001413    SSX10758.1    SSX30440.1    ACPB03000970    GBYB01008986    JAG78753.1    KZ288210    PBC32932.1    CVRI01000067    CRL06798.1    GDHF01031421    GDHF01020037    GDHF01003132    GDHF01000620    JAI20893.1    JAI32277.1    JAI49182.1    JAI51694.1    GL771642    EFZ09665.1    KQ435711    KOX79466.1    LBMM01002318    KMQ94993.1    KY681042    AUP42569.1    JRES01000611    KNC29864.1    AAZX01004127    KQ414784    KOC61139.1    CH964161    EDW79976.2    CH902618    EDV39843.2    CH933809    EDW17524.2    KRG05599.1    KRG05600.1    CH954178    EDV50369.1    AE014296    AY051988    AAF47714.3    AAK93412.1    CM000363    CM002912    EDX09013.1    KMY97240.1    GBXI01006425    GBXI01006211    JAD07867.1    JAD08081.1    CH379070    EAL30233.3    CM000159    EDW93860.2    EDW93859.1    OUUW01000002    SPP77414.1    CH940647    EDW68440.2    KB631935    ERL87331.1    APGK01040030    KB740975    ENN76520.1    CH480817    EDW50267.1    JXJN01010374    CP012525    ALC43111.1    PYGN01002248    PSN31011.1    GBGD01000446    JAC88443.1    JXUM01121179    KQ566471    KXJ70105.1    AGBW02006445    OWR55218.1    CH479208    EDW31122.1    GGMR01008525    MBY21144.1   

Proteomes

UP000053268    UP000218220    UP000053240    UP000235965    UP000007266    UP000027135    + More
UP000076407    UP000075882    UP000007062    UP000009046    UP000030765    UP000075884    UP000076408    UP000075840    UP000075903    UP000075883    UP000075902    UP000075881    UP000075920    UP000000673    UP000075880    UP000075900    UP000075886    UP000069272    UP000002320    UP000008820    UP000007819    UP000008237    UP000078541    UP000075809    UP000007755    UP000078492    UP000092462    UP000078540    UP000000311    UP000078542    UP000005205    UP000076502    UP000015103    UP000242457    UP000005203    UP000183832    UP000192221    UP000053105    UP000091820    UP000095301    UP000036403    UP000037069    UP000095300    UP000002358    UP000053825    UP000007798    UP000007801    UP000009192    UP000008711    UP000000803    UP000000304    UP000001819    UP000002282    UP000268350    UP000008792    UP000030742    UP000019118    UP000092445    UP000001292    UP000078200    UP000092443    UP000092460    UP000092553    UP000245037    UP000075885    UP000069940    UP000249989    UP000007151    UP000008744   

PRIDE

Q9VZV2   

Pfam

PF01607   CBM_14        + More
PF00704   Glyco_hydro_18
PF00631   G-gamma

Interpro

IPR011583   Chitinase_II        + More
IPR036508   Chitin-bd_dom_sf       
IPR017853   Glycoside_hydrolase_SF       
IPR002557   Chitin-bd_dom       
IPR001579   Glyco_hydro_18_chit_AS       
IPR001223   Glyco_hydro18_cat       
IPR029070   Chitinase_insertion_sf       
IPR015898   G-protein_gamma-like_dom       
IPR036284   GGL_sf       

SUPFAM

SSF57625   SSF57625        + More
SSF51445   SSF51445       
SSF54556   SSF54556       
SSF48670   SSF48670       

Gene 3D

3.10.50.10     4.10.260.10    

CDD

cd00068  GGL

ProteinModelPortal

U5LUV7   A0A194QAT6   I1VX14   A0A221LFZ8   A0A2H4Z0A2   I6QMM8   + More
A0A2A4J3B9   A0A194QTM7   A0A2J7QAA7   D2A576   Q0Z942   A0A1B6CMH7   A0A067RC35   A0A0C5CUE1   A0A182WWE3   A0A182L3S0   Q7QIJ1   E0VH87   A0A084VDZ0   A0A182N9E9   A0A182Y814   A0A182I6M1   A0A182VKK7   A0A182LZT7   A0A182TW87   A0A182KCD4   A0A182WBE5   W5JDL8   A0A182IMA2   A0A182RJG7   A0A182QSR0   A0A2S2Q2H3   A0A182FGQ4   A0A2H8TNI6   B0X022   Q17BM9   A0A1Q3FMV9   A0A1Q3FMW1   J9K0Y5   A0A2H4Z2U0   A0A2K8JRQ5   A0A0A9WC72   E2B3W5   A0A195F5G8   A0A2I6Q763   A0A151X836   F4WXH8   A0A195DB08   A0A1B0D2K6   A0A195AY20   E2AH26   A0A195C1V2   A0A158NS63   A0A1V0QBC4   A0A154P9H9   A0A336MKJ0   T1IFA7   A0A0C9RP99   A0A2A3ENV6   A0A088AAP6   A0A1J1J5Q0   A0A1W4W1Q5   A0A0K8WKW5   E9JBY3   A0A0M9A9W5   A0A1A9X2U9   A0A1I8N4R4   A0A0J7KXG8   A0A2Z2Z004   A0A0L0CEG1   A0A1I8PQ66   K7IWS2   A0A0L7QRF8   B4N6I7   B3M7E5   B4KWS7   B3NF27   Q9VZV2   B4QP18   A0A0A1X9V2   Q29E30   B4PCV6   B4PCV5   A0A3B0J5V4   B4LGX0   U4U9T5   N6U4J9   A0A1B0AD34   B4HTJ6   A0A1A9VSK3   A0A1A9Y2B6   A0A1B0B9H1   A0A0M5IYA4   A0A2P8XG74   A0A069DWM4   A0A182PIM9   A0A182H9P8   A0A212FNA5   B4H407   A0A2S2NVJ0  

PDB

5WVH     E-value=0,     Score=2413

KEGG

101736080    K01183 chitinase [EC:3.2.1.14] | (RefSeq) probable chitinase 3

PATHWAY

00520    Amino sugar and nucleotide sugar metabolism - Bombyx mori (domestic silkworm)
01100    Metabolic pathways - Bombyx mori (domestic silkworm)

GO

GO:0006030   GO:0004568   GO:0008061   GO:0005975   GO:0005576   GO:0004553   GO:0005737   GO:0006032   GO:0016021   GO:0007186   GO:0040003   GO:0018990   GO:0042060   GO:0030677   GO:0016155   GO:0003824  

SignalP

Position:   1 - 30,         Likelihood:  0.690327

 

 

Length:

991

Number of predicted TMHs:

1

Exp number of AAs in TMHs:

19.18846

Exp number, first 60 AAs:

19.17803

Total prob of N-in:

0.95508

POSSIBLE N-term signal

sequence

inside

1  -  8

TMhelix

9  -  28

outside

29  -  991

 

 

Pi

237.473692

Theta

170.727482

Tajima's D

1.386464

CLR

0.511255

CSRT

0.75781210939453

Interpretation

Uncertain