Silkworm Genome Informatics Database

Gene

KWMTBOMO10065

Pre Gene Modal

BGIBMGA005675

Annotation

PREDICTED:_uncharacterized_protein_LOC105841617_[Bombyx_mori]

Location

Bomo_Chr17(-):1584779-1585919 View in EpiBrowser

Location in the cell

Mitochondrial Reliability : 2.472

CDS

ATGATGACACGTATAGTTGATTCGGCTGCACGGCGGAGCTCCCTAACCTACATAGAAATAGAAGACACGAAAGATCAGCCTCCGTATGCCTTACCTGGCATCACGCCAGGACACGAAATGCTCCTTTTGGTCACAATGATCAGGGATTTGCCGTTGAAGAAGCCTTTGCCAGAGCCTGATGTGTCACAATGGAAGCAGTACCGCTGGATAGACTGGGCTCGCGGTCGTGGACTCTACGAAGCCTACGACTGTCCCAAGACTAAATTCTTGAAGGTCAACGGTCTGATGAAACTGTCTTACGCTCCTCATTTGCTGGACGTCCAGAGTACTGAATCGACTTAG

Protein

MMTRIVDSAARRSSLTYIEIEDTKDQPPYALPGITPGHEMLLLVTMIRDLPLKKPLPEPDVSQWKQYRWIDWARGRGLYEAYDCPKTKFLKVNGLMKLSYAPHLLDVQSTEST

Similarity

Belongs to the peptidase C2 family.

Uniprot

H9J833 A0A212FGS3 A0A3S2LG27 A0A2H1W5Z6 A0A194QGK6 A0A194QXQ0 + More
A0A195BK74

Pubmed

19121390 22118469 26354079

EMBL

BABH01020353 AGBW02008623 OWR52903.1 RSAL01000145 RVE45950.1 ODYU01006520 + More
SOQ48443.1 KQ459232 KPJ02576.1 KQ461155 KPJ08356.1 KQ976450 KYM85688.1

Proteomes

UP000005204 UP000007151 UP000283053 UP000053268 UP000053240 UP000078540 + More

PRIDE

H9J833

Pfam

PF00612 IQ

Interpro

IPR038765   Papain-like_cys_pep_sf        + More
IPR001300   Peptidase_C2_calpain_cat
IPR000048   IQ_motif_EF-hand-BS

SUPFAM

SSF54001 SSF54001

ProteinModelPortal

H9J833 A0A212FGS3 A0A3S2LG27 A0A2H1W5Z6 A0A194QGK6 A0A194QXQ0 + More
A0A195BK74

KEGG

105841617 no KO assigned | (RefSeq) uncharacterized LOC105841617

GO

GO:0004198

Length:

113

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.01866

Exp number, first 60 AAs:

0.01734

Total prob of N-in:

0.38480

outside

1 - 113

Pi

159.366263

Theta

64.082221

Tajima's D

0.515993

CLR

0.087307

CSRT

0.525173741312934

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics