Gene

KWMTBOMO10063

Annotation

PREDICTED:_LOW_QUALITY_PROTEIN:_uncharacterized_protein_LOC101744489_[Bombyx_mori]

Location

Bomo_Chr17(-):1447107-1450719      View in EpiBrowser

Location in the cell

PlasmaMembrane   Reliability : 3.07

CDS

ATGATTCTTGTTATTTCACCTCCACCTCGGAAATTTGATCCGAAATCTTTGAAATTACAAGACACTACGCCGACGCCAGGCGTAGTGTCCATCTTGAAGATATCTTCAATAGTTGTACACGAAATTGCCGAACTACATAACTTCAGATTTAATTACACAATCACCGATCGATGGATAGGAACTTTTGAGAAGAACAGCAGTAGGGTTGTGGCGAATTCGCTTTATTTTAGAGAACAAGATATTTCACCTATAATTCGGTATTTGGCTTATCTAAGCGACAAATTGGAAGTAATTCATCCTCCTATTACTTCTATAGAGACTAGATACTACTACCGCATCCCAACGAAAGGTCCAGGGAAATTGGAGAACCAGTTTTTAAGACCTTTAAGCAATGGGGCGTGGTTGTGCCTCATAGCGGTCTCTACACTTTGTGCAATATTATTAATGATGTCGGCTATTGTGGAGCAACGTCCATCAATGGTTCAGTATGCGGTATTTTCGGTTATAGCTTCAGTATGCCAGCAGTTTTTTCAAGATACGGACGATGTTGAAGGTCGAAGAATCTCTGGAGGTAAGATTTGCTTCAATTCAAGTACAATTTAG

Protein

MILVISPPPRKFDPKSLKLQDTTPTPGVVSILKISSIVVHEIAELHNFRFNYTITDRWIGTFEKNSSRVVANSLYFREQDISPIIRYLAYLSDKLEVIHPPITSIETRYYYRIPTKGPGKLENQFLRPLSNGAWLCLIAVSTLCAILLMMSAIVEQRPSMVQYAVFSVIASVCQQFFQDTDDVEGRRISGGKICFNSSTI

Uniprot

A0A1B3B740   A0A2A4J6W5   H9A5S7   A0A223HCW9   A0A0K8TUE7   A0A223HDA4   + More
A0A2H1WAF3   A0A345BF12   A0A2H1V3L3   A0A2W1BNK9   A0A2A4JXS0   A0A140G9F7   A0A0N1I7J4   A0A194Q8E3   A0A345BF29   A0A1V1WBR9   A0A212F4R3   A0A0F7QHP8   A0A0K8TUY8   A0A0L7KUC0   A0A212FGP1   A0A345BF37   A0A223HCY1   B4IUV0  

Pubmed

22363688    27006164    28150741    26017144    29727827    28756777    + More
27004525    26354079    22118469    25803580    26227816    17994087    17550304   

EMBL

KT588094    AOE48004.1    NWSH01002973    PCG67162.1    JN836727    AFC91767.2    + More
KY283563    AST36223.1    GCVX01000128    JAI18102.1    KY283696    AST36355.1    ODYU01007362    SOQ50061.1    MG820665    AXF48836.1    ODYU01000520    SOQ35428.1    KZ149953    PZC76538.1    NWSH01000472    PCG76182.1    KU702609    AMM70636.1    KQ460557    KPJ13966.1    KQ459324    KPJ01664.1    MG820682    AXF48853.1    GENK01000121    JAV45792.1    AGBW02010320    OWR48735.1    LC017800    BAR64814.1    GCVX01000127    JAI18103.1    JTDY01005586    KOB66858.1    AGBW02008623    OWR52899.1    MG820690    AXF48861.1    KY283572    AST36232.1    CH892121    EDX00164.2   

Proteomes

UP000218220    UP000053240    UP000053268    UP000007151    UP000037510    UP000002282    + More

Pfam

PF00060   Lig_chan        + More
PF00497   SBP_bac_3
PF10613   Lig_chan-Glu_bd

Interpro

IPR001320   Iontro_rcpt        + More
IPR001638   Solute-binding_3/MltF_N       
IPR019594   Glu/Gly-bd       

ProteinModelPortal

A0A1B3B740   A0A2A4J6W5   H9A5S7   A0A223HCW9   A0A0K8TUE7   A0A223HDA4   + More
A0A2H1WAF3   A0A345BF12   A0A2H1V3L3   A0A2W1BNK9   A0A2A4JXS0   A0A140G9F7   A0A0N1I7J4   A0A194Q8E3   A0A345BF29   A0A1V1WBR9   A0A212F4R3   A0A0F7QHP8   A0A0K8TUY8   A0A0L7KUC0   A0A212FGP1   A0A345BF37   A0A223HCY1   B4IUV0  

KEGG

101744489    no KO assigned | (RefSeq) uncharacterized LOC101744489

GO

GO:0016021   GO:0004970  

Length:

200

Number of predicted TMHs:

1

Exp number of AAs in TMHs:

23.43869

Exp number, first 60 AAs:

0.21001

Total prob of N-in:

0.20426

outside

1  -  131

TMhelix

132  -  154

inside

155  -  200

 

 

Pi

193.380897

Theta

190.196565

Tajima's D

0.109324

CLR

0.750996

CSRT

0.3972801359932

Interpretation

Uncertain