Gene

KWMTBOMO10034

Pre Gene Modal

BGIBMGA005525

Annotation

PREDICTED:_beta-1?4-galactosyltransferase_2-like_[Papilio_polytes]

Location

Bomo_Chr17(+):723860-727337      View in EpiBrowser

Location in the cell

Mitochondrial   Reliability : 1.484

CDS

ATGCCCAAATGTTCATTGAAAAACCGACTACTGCAACTACGGCTGAGCACTTGTGTAACAACAGTACTATGTTTAGTGGCAATTATAAATTTCTTTTCATTCTACGGAAAATACAATTACTCTCATATAAATCCACAAGACATACCCAATCAATTGTATAAAGAAATAGCTTCAAACATAGTTTTGAAAAAGTCGAAACCAGACTGTGAGTTTGAGAATATTTTGAAAAGTACAAAAACTACAGACAGCTGGGATGCGCCGAAGAAGAATGAAAACTTCAAAGCCAACAATATTGTTAACGGTAGCTATGTTCCTGAAGAATGCAACCCAATGTTCAGTGTGGCCGTGATAGTTACATACAGGAACAGACAAAAACACCTGGATGTCTTTCTACCATACATGCACAACTTTTTGAGGAAGCAACAATTGCATTATAAAATATACTTAATTGAACAAGAAGATAAAAAACCATGGAACAAAGGCTTGCTTTACAATATCGGTGCCAAAAGGGCCATAGCCGAAAAATTCCCCTGCCTCATATTGCACGATGTGGATCTTCTACCATTAGATGAAAGCAATCTCTATGCCTGCCTGAACAACCCGCGACACATGAGCGCCAGCATAGACAAGTTCAGATACGTCCTGACTTACGATTATCTAGTCGGTGGAGTGTTGGCGATAACGGCGGACCAGTTCGTGAAGGTTAATGGGTTTTCTAACAGATTCGAAGGATGGGGCGGAGAAGATGATGACTTTTACGAAAGACTGTCTGCGCACGGATTCAACGTTGTGAGGTTCCCACCTCGCATGTCGCGATATACCATGTTGGTTCACCCTCAGGAGCCAAAGAACTCGAGAAGACATCAAATTATGGCCGAAAATCTCCATACGAAAAGTCACGACGGCTACGACTCCGTGCACTACCAGACTGTAGACGAAAGACAACAGAAACTGTTCACCCAACTGCGAGTCAAGTTATGA

Protein

MPKCSLKNRLLQLRLSTCVTTVLCLVAIINFFSFYGKYNYSHINPQDIPNQLYKEIASNIVLKKSKPDCEFENILKSTKTTDSWDAPKKNENFKANNIVNGSYVPEECNPMFSVAVIVTYRNRQKHLDVFLPYMHNFLRKQQLHYKIYLIEQEDKKPWNKGLLYNIGAKRAIAEKFPCLILHDVDLLPLDESNLYACLNNPRHMSASIDKFRYVLTYDYLVGGVLAITADQFVKVNGFSNRFEGWGGEDDDFYERLSAHGFNVVRFPPRMSRYTMLVHPQEPKNSRRHQIMAENLHTKSHDGYDSVHYQTVDERQQKLFTQLRVKL

Uniprot

H9J7N3   S4PX51   A0A2A4J6Q6   A0A194QAT2   A0A0N1IQ07   A0A212FF74   + More
A0A2H1WVA9   A0A3S2NUE5   A0A0L7LPU2   B4NF99   B4M066   A0A0A1XME8   A0A084VY14   A0A182LXD4   A0A2M3ZAW0   A0A0L0BY63   A0A182K7C5   A0A1I8PJA1   A0A182JJ51   A0A1S4GXT7   A0A182V8C6   A0A182TN22   A7UUK4   A0A1A9Z6W6   A0A1I8NAT3   A0A1A9US67   A0A182XL64   A0A182L0W7   A0A182ICG1   A0A3B0KS36   D3TQ83   W8BYL7   A0A182PCQ2   A0A1A9YBU5   A0A182W6P3   A0A336KDM0   A0A1Y9HFA8   Q0IF91   A0A182Y3F8   A0A1A9X1U6   B4KDT2   A0A182MZ00   A0A1J1HJA3   A0A0K8VID4   A0A034WD93   A0A182H5W3   A0A182QJT0   B4G4W7   Q298Z2   B3LXP0   A0A3S2N9L2   A0A1B0B842   A0A1L8E277   W5J662   A0A2M4BVI2   A0A0M4EM62   N6UAD3   B4JTB7   A0A182F4B7   A0A1W4VUD7   Q9VAQ8   B4QZF2   B3P5M7   B4PQ88   B4HZ44   D7EJY6   A0A1Y1LE70   A0A1Y1LFS1   A0A2A4JVV5   A0A2H1VH51   A0A1Y1LHY1   A0A1Y1LC51   A0A2S2QRM5   A0A1B6G8Z7   A0A1E1X7D5   A0A2R7WYP8   A0A131XG37   A0A1E1XP68   A0A1L8E1C0   A0A0L7KYX6   Q6J4T9   A0A1B6KML8   A0A1B6HT31  

Pubmed

19121390    23622113    26354079    22118469    26227816    17994087    + More
25830018    24438588    26108605    12364791    25315136    20966253    20353571    24495485    17510324    25244985    25348373    26483478    15632085    20920257    23761445    23537049    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    17550304    18362917    19820115    28004739    28503490    28049606    29209593    15173167   

EMBL

BABH01020434    GAIX01005648    JAA86912.1    NWSH01002778    PCG67549.1    KQ459232    + More
KPJ02539.1    KQ460044    KPJ18304.1    AGBW02008849    OWR52382.1    ODYU01010928    SOQ56344.1    RSAL01000075    RVE48908.1    JTDY01000379    KOB77460.1    CH964251    EDW82966.1    CH940650    EDW68316.1    GBXI01001788    JAD12504.1    ATLV01018243    KE525226    KFB42858.1    AXCM01009415    GGFM01004837    MBW25588.1    JRES01001250    KNC24224.1    AAAB01008964    EDO63572.1    APCN01000798    OUUW01000013    SPP88061.1    CCAG010012178    EZ423585    ADD19861.1    GAMC01000095    JAC06461.1    UFQS01000295    UFQT01000295    SSX02567.1    SSX22941.1    CH477389    EAT41995.1    CH933806    EDW14929.1    CVRI01000001    CRK86550.1    GDHF01014029    JAI38285.1    GAKP01007229    JAC51723.1    JXUM01112743    KQ565620    KXJ70838.1    AXCN02000789    CH479179    EDW24633.1    CM000070    EAL27812.1    CH902617    EDV43934.1    RSAL01000170    RVE45184.1    JXJN01009829    GFDF01001345    JAV12739.1    ADMH02002138    ETN58350.1    GGFJ01007873    MBW57014.1    CP012526    ALC45526.1    APGK01032722    KB740848    KB632411    ENN78690.1    ERL95245.1    CH916373    EDV95007.1    AE014297    BT011457    AAF56843.1    AAR99115.1    CM000364    EDX14790.1    CH954182    EDV53277.1    CM000160    EDW98357.1    CH480819    EDW53301.1    KQ972213    EFA12917.2    GEZM01060218    GEZM01060214    JAV71188.1    GEZM01060219    GEZM01060216    JAV71190.1    NWSH01000474    PCG76155.1    ODYU01002540    SOQ40169.1    GEZM01060220    JAV71186.1    GEZM01060213    JAV71193.1    GGMS01011216    MBY80419.1    GECZ01013418    GECZ01010863    JAS56351.1    JAS58906.1    GFAC01004070    JAT95118.1    KK856012    PTY24632.1    GEFH01003511    JAP65070.1    GFAA01002312    JAU01123.1    GFDF01001551    JAV12533.1    JTDY01004223    KOB68432.1    AY601103    AAT11926.1    GEBQ01027272    JAT12705.1    GECU01029886    JAS77820.1   

Proteomes

UP000005204    UP000218220    UP000053268    UP000053240    UP000007151    UP000283053    + More
UP000037510    UP000007798    UP000008792    UP000030765    UP000075883    UP000037069    UP000075881    UP000095300    UP000075880    UP000075903    UP000075902    UP000007062    UP000092445    UP000095301    UP000078200    UP000076407    UP000075882    UP000075840    UP000268350    UP000092444    UP000075885    UP000092443    UP000075920    UP000075900    UP000008820    UP000076408    UP000091820    UP000009192    UP000075884    UP000183832    UP000069940    UP000249989    UP000075886    UP000008744    UP000001819    UP000007801    UP000092460    UP000000673    UP000092553    UP000019118    UP000030742    UP000001070    UP000069272    UP000192221    UP000000803    UP000000304    UP000008711    UP000002282    UP000001292    UP000007266   

PRIDE

H9J7N3    Q9VAQ8   

Pfam

PF02709   Glyco_transf_7C        + More
PF13733   Glyco_transf_7N
PF00400   WD40
PF12894   ANAPC4_WD40

Interpro

IPR003859   Galactosyl_T        + More
IPR029044   Nucleotide-diphossugar_trans       
IPR027995   Galactosyl_T_N       
IPR027791   Galactosyl_T_C       
IPR015943   WD40/YVTN_repeat-like_dom_sf       
IPR017986   WD40_repeat_dom       
IPR024977   Apc4_WD40_dom       
IPR001680   WD40_repeat       
IPR019775   WD40_repeat_CS       
IPR036322   WD40_repeat_dom_sf       

SUPFAM

SSF53448   SSF53448        + More
SSF50978   SSF50978       

Gene 3D

3.90.550.10     2.130.10.10    

ProteinModelPortal

H9J7N3   S4PX51   A0A2A4J6Q6   A0A194QAT2   A0A0N1IQ07   A0A212FF74   + More
A0A2H1WVA9   A0A3S2NUE5   A0A0L7LPU2   B4NF99   B4M066   A0A0A1XME8   A0A084VY14   A0A182LXD4   A0A2M3ZAW0   A0A0L0BY63   A0A182K7C5   A0A1I8PJA1   A0A182JJ51   A0A1S4GXT7   A0A182V8C6   A0A182TN22   A7UUK4   A0A1A9Z6W6   A0A1I8NAT3   A0A1A9US67   A0A182XL64   A0A182L0W7   A0A182ICG1   A0A3B0KS36   D3TQ83   W8BYL7   A0A182PCQ2   A0A1A9YBU5   A0A182W6P3   A0A336KDM0   A0A1Y9HFA8   Q0IF91   A0A182Y3F8   A0A1A9X1U6   B4KDT2   A0A182MZ00   A0A1J1HJA3   A0A0K8VID4   A0A034WD93   A0A182H5W3   A0A182QJT0   B4G4W7   Q298Z2   B3LXP0   A0A3S2N9L2   A0A1B0B842   A0A1L8E277   W5J662   A0A2M4BVI2   A0A0M4EM62   N6UAD3   B4JTB7   A0A182F4B7   A0A1W4VUD7   Q9VAQ8   B4QZF2   B3P5M7   B4PQ88   B4HZ44   D7EJY6   A0A1Y1LE70   A0A1Y1LFS1   A0A2A4JVV5   A0A2H1VH51   A0A1Y1LHY1   A0A1Y1LC51   A0A2S2QRM5   A0A1B6G8Z7   A0A1E1X7D5   A0A2R7WYP8   A0A131XG37   A0A1E1XP68   A0A1L8E1C0   A0A0L7KYX6   Q6J4T9   A0A1B6KML8   A0A1B6HT31  

PDB

6FWT     E-value=8.3109e-46,     Score=462

KEGG

101737980    no KO assigned | (RefSeq) beta-1,4-N-acetylgalactosaminyltransferase bre-4

GO

GO:0016757   GO:0005975   GO:0016021   GO:0033842   GO:0006044   GO:0005794   GO:0033207   GO:0006688   GO:0008376   GO:0009247   GO:0050660   GO:0004553   GO:0006508   GO:0005634   GO:0004672   GO:0030677   GO:0016155   GO:0003824  

PANTHER

PTHR19300  

Length:

326

Number of predicted TMHs:

1

Exp number of AAs in TMHs:

25.03393

Exp number, first 60 AAs:

22.45118

Total prob of N-in:

0.80010

POSSIBLE N-term signal

sequence

inside

1  -  12

TMhelix

13  -  35

outside

36  -  326

 

 

Pi

297.236117

Theta

197.774608

Tajima's D

1.458058

CLR

0.219889

CSRT

0.782860856957152

Interpretation

Uncertain