SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO10033
Pre Gene Modal
BGIBMGA005691
Annotation
PREDICTED:_uncharacterized_protein_LOC101738110_isoform_X1_[Bombyx_mori]
Location
Bomo_Chr17(-):713860-721739      View in EpiBrowser
Location in the cell
Cytoplasmic   Reliability : 1.365 Nuclear   Reliability : 1.522
 

Sequence

CDS
ATGAATAGTAAAACAATTTCAACAGACAGTGAATTAACCTGCAAACCGCTCGATAGTTATGAAGAATTAATATCATTTTTGGAGGACCCTCCAGCTTGGAGCACCTTGTGTAAAGAGATGACTCCGCATAGTAAAGCACTGATAAAAAACACAGAGGTAAACAAAAGTAAACCTCATTCAACAATAGCCTCTTTCCAAATCCAAACAACGGAAGACTTCTGTCATTTCAACCCGGATACGGAAAACGAAACATTGCGACACGATAAAAAAAAAACACCGAAAACTTTAGTTTGTCATGATATGGCAAACGGGTACCACGATGACAGTACCGTAGACGGCACGGGGTGTCACCATGCCTACACTTTCTACAACTGGGCAGCTGTCGATATCTTCTGTTATTTTAGTCATCATCTCATAACGATACCCCCTTTGAGCTGGATCAATGTTGGCCACGCGCACGGCGTCAAAGTTATCGGTACAGTGATAACGGAGTGGAACGATGGGGTTGCGTTTTGGAATAAAATGCTGGCCTCGGAAGCAGTGTACCGATATTTCGCCAGTGCTCTGGTCTCCGTCGCCAAGGTCCTTAAGTTTGATGGATGGCTTCTCAATATAGAGAATCAAATAGCCAAACCGGAGATGTTACTGGACTTTGTCCGTTATTTCCATCGAATTCTGCACCAAGAACTGGACGATCCGGTGCTGATCTGGTACGACAGTGTGACGATACAAGGGACATTAATCTGGCAGAATGGTCTCAATCATAAGAATAGGCCGTTCTTCGACGCCTGCGACGGCATATTCACGAATTACTCGTGGTCAGAAGCGAACGTGTCCTCTAGCGCCGTGGAGGCGGGAGATCGACTCACAGACCTCTACATCGGGATCGATGTGTGGGGCAGGAACTTCTATGGCGGGGGACAGTTGAATACACAATCGGCCGTCAAAATAGCACATAAATATGGCTGTTCCATGGCTATATTCGCTCCGGCCTGGTCACACGAGGCCATGAGTCTGGAAGACTGCAACATCAATAGAGTGGCTATGACGGAGGGCGTGGACACGTACCGCCAGTTCTTGCTCAGGGACAGGGCGCTGTGGGGCACCATCTGGCCGTATCTGAACACGAGGCTCCCTTGCGAATTACCATTTCGAACTTCCTTTTGCAGAGGGCAAGGATTAAAACGAAGATTGTATGGAGAGGTTCTTGGTCCAGTTCCGTGGTACAACCTGCGACATATGCAGTACCAACCGAACTCAACTCACGGGGCCCACGGCTACTTCATCTCTGCTTTACCGCACATCTTACGAATGTCGAAAAATGATCTCCTGAAAGACCCTGACGCTCTGAAAAAAATGAGGAAACTTTTAAACGATGATGAGGCTGTGAGGAGTATGGACCTACCAGACGACGCGCGGGACGATGTACCAATAGACGAATTCACAGATGACGATGACAATGTTATTTCTGATGAGAAATTTGACGATACCGATAACGGCTCTAAAGATATAAAGAGGAAACTGCAGATCTCCTCGAAGTCGAATGCGAAGGCTTCAAGACTTTATGATGTCAAAGAAAACGCGGTGAATTCTTCGAGCCATTCAACTGTCACTTTAAAAATAAATAAGCCCGTAGATAAGACTCAGTACGCGCTAGCTTGTGTCCCTGGCGAGCTAGAATGCTTAGAGTTGTACCTAGATGACAGTTTCACAGGAGGGTCGTGTCTGAAGGTCAATCCTTCAGATGCAGCCCAGTCTGAACATCGCTTTATAAGGTTGTTCCATTGCGATTTCACATGTGAAGAAAAGTTGATAGCTTGCGTGGTCACGAAAAATTTGAAAAACTACCCAGAACAAAATTTAAATGTCAAATTGTTTATGAAAGATCAAAACGATAGGGACTTGAAAGTGGTGCTGGTGGGGCGAAGTCTGTCGCGTGCTGCTCAGAGTGTTGCTTCAAGCAGTAAAGTCAATTTGTACCCCGTGAACGGGTCGTCGGACGAGGGGTTCAGGGACCTTCAGAAGTACATATTGCTGAACGAACCAGAGTTCTATGTTCCAGTGGATAACGCTTACAATTGGAGAGTAAGGTACTATGAAATATCGTTACCCGGCACTCGGATAACTTCAATTAACCTTCGCACCACCTTCTCCGAGGGACCCATTCTGCTGGGACACTTCGGGCTCTGCGCGAGGAAATCGGATCTTTGA
Protein
MNSKTISTDSELTCKPLDSYEELISFLEDPPAWSTLCKEMTPHSKALIKNTEVNKSKPHSTIASFQIQTTEDFCHFNPDTENETLRHDKKKTPKTLVCHDMANGYHDDSTVDGTGCHHAYTFYNWAAVDIFCYFSHHLITIPPLSWINVGHAHGVKVIGTVITEWNDGVAFWNKMLASEAVYRYFASALVSVAKVLKFDGWLLNIENQIAKPEMLLDFVRYFHRILHQELDDPVLIWYDSVTIQGTLIWQNGLNHKNRPFFDACDGIFTNYSWSEANVSSSAVEAGDRLTDLYIGIDVWGRNFYGGGQLNTQSAVKIAHKYGCSMAIFAPAWSHEAMSLEDCNINRVAMTEGVDTYRQFLLRDRALWGTIWPYLNTRLPCELPFRTSFCRGQGLKRRLYGEVLGPVPWYNLRHMQYQPNSTHGAHGYFISALPHILRMSKNDLLKDPDALKKMRKLLNDDEAVRSMDLPDDARDDVPIDEFTDDDDNVISDEKFDDTDNGSKDIKRKLQISSKSNAKASRLYDVKENAVNSSSHSTVTLKINKPVDKTQYALACVPGELECLELYLDDSFTGGSCLKVNPSDAAQSEHRFIRLFHCDFTCEEKLIACVVTKNLKNYPEQNLNVKLFMKDQNDRDLKVVLVGRSLSRAAQSVASSSKVNLYPVNGSSDEGFRDLQKYILLNEPEFYVPVDNAYNWRVRYYEISLPGTRITSINLRTTFSEGPILLGHFGLCARKSDL

Summary

Similarity
Belongs to the GMC oxidoreductase family.
Uniprot
A0A2A4JGP6   A0A2W1BFS3   A0A3S2L9X8   A0A0N0PDV5   A0A2H1VIQ0   A0A194QC26   + More
A0A212FF69   A0A0L7LD60   A0A0L7K4C0   E9IGL1  
Pubmed
28756777    26354079    22118469    26227816    21282665   
EMBL
NWSH01001549    PCG70888.1    KZ150179    PZC72524.1    RSAL01000075    RVE48909.1    + More
KQ460044    KPJ18305.1    ODYU01002782    SOQ40703.1    KQ459232    KPJ02540.1    AGBW02008849    OWR52381.1    JTDY01001621    KOB73325.1    JTDY01011372    KOB56747.1    GL763048    EFZ20312.1   
Proteomes
UP000218220    UP000283053    UP000053240    UP000053268    UP000007151    UP000037510    + More
Pfam
PF03644   Glyco_hydro_85        + More
PF05199   GMC_oxred_C
PF00732   GMC_oxred_N
Interpro
IPR032979   ENGase        + More
IPR017853   Glycoside_hydrolase_SF       
IPR005201   Glyco_hydro_85       
IPR008979   Galactose-bd-like_sf       
IPR007867   GMC_OxRtase_C       
IPR000172   GMC_OxRdtase_N       
IPR036188   FAD/NAD-bd_sf       
SUPFAM
SSF51445   SSF51445        + More
SSF51905   SSF51905       
Gene 3D
2.60.120.260     3.50.50.60    
ProteinModelPortal
A0A2A4JGP6   A0A2W1BFS3   A0A3S2L9X8   A0A0N0PDV5   A0A2H1VIQ0   A0A194QC26   + More
A0A212FF69   A0A0L7LD60   A0A0L7K4C0   E9IGL1  
PDB
3FHA     E-value=1.88189e-11,     Score=169

Ontologies

KEGG
101738110    K01227 mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase [EC:3.2.1.96] | (RefSeq) uncharacteri
PATHWAY
00511    Other glycan degradation - Bombyx mori (domestic silkworm)
GO
GO:0033925   GO:0005737   GO:0050660   GO:0016614   GO:0004553   GO:0006508   GO:0005634   GO:0004672   GO:0030677   GO:0016155   GO:0003824  
PANTHER
PTHR13246  

Topology

Length:
736
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.56399
Exp number, first 60 AAs:
0
Total prob of N-in:
0.02611
outside
1  -  736
 
 

Population Genetic Test Statistics

Pi
208.466251
Theta
144.618318
Tajima's D
1.470192
CLR
0.045064
CSRT
0.781960901954902
Interpretation
Uncertain
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