SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO10029
Pre Gene Modal
BGIBMGA005694
Annotation
PREDICTED:_uncharacterized_protein_LOC101740212_[Bombyx_mori]
Location in the cell
Extracellular   Reliability : 2.308
 

Sequence

CDS
ATGCAAGCATGGACGCCAGTTCTGACCAACATAGCGTTGCTGATCATCGCAACAGCACACTGTTTGATCAGCATCGTCAGTATCTACCACTTGTCTAAGAGGATATGTCCCTGCTTCCGCCCGAAGCAACCCTTCGACCATAACCAATTCGATCCCACTTTTAAAGGAGGTCAGCCGTTTGTGGTTACAGTAGACGAAGCCAAAAAGACTCAAGACGTGGAGAGAAATAAGAACCACGAACTATGTAAGGAGTTGGAGATAAAACTTCAGGGAGAGACATTAAAGAAAAAGAAGGACGAGACTCAGGAGTTTGGGAGTGCGAACAGCAAAGAGAAATTGGTGACGCACTGGCTGGGTCAAGGAGCAGCGACGACGGGGCGGACACGACACGGCGTTCGCAAACAGAGAAACAAACACCCCCCCGTGGTCCTCCTGCCTGCCCACCCCGCCAGCACCACACGCTTTTATCCGGCTTCGTTCGCCACGCTCTCATAA
Protein
MQAWTPVLTNIALLIIATAHCLISIVSIYHLSKRICPCFRPKQPFDHNQFDPTFKGGQPFVVTVDEAKKTQDVERNKNHELCKELEIKLQGETLKKKKDETQEFGSANSKEKLVTHWLGQGAATTGRTRHGVRKQRNKHPPVVLLPAHPASTTRFYPASFATLS

Summary

Pfam
PF04103   CD20
Interpro
IPR030417   MS4A        + More
IPR007237   CD20-like       

Ontologies

Topology

SignalP
Position:   1 - 21,         Likelihood:  0.529328
 
 
Length:
164
Number of predicted TMHs:
1
Exp number of AAs in TMHs:
22.73317
Exp number, first 60 AAs:
22.69014
Total prob of N-in:
0.67892
POSSIBLE N-term signal
sequence
inside
1  -  6
TMhelix
7  -  29
outside
30  -  164
 
 

Population Genetic Test Statistics

Pi
184.251149
Theta
156.259195
Tajima's D
0.427849
CLR
0
CSRT
0.496825158742063
Interpretation
Uncertain
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