SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO10022  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA005700
Annotation
PREDICTED:_epsin-2_[Amyelois_transitella]
Location in the cell
Nuclear   Reliability : 3.431
 

Sequence

CDS
ATGCCCCGGGCCCGGGACGAGATGCAAGTGAACGTAGCAGGCCTCAGAAGGAATATAAAGAACCTCGCACACAACTATTCCGATGCTCAGGTCAAAGTTCGCGAGGCGACTTCAAACGACCCATGGGGTCCGTCCAGCACGCTCATGGCGGAGATCGCCGACCTCACGTACAACGTCATGGCCTTCACGGAGATCATGCAGATGATATGGAAGCGTTTAAATGACCACGGCAAGAACTGGAGGCACGTTTACAAAGCTCTGGTCCTGATGGAGTACCTCATCAAGACCGGCAGCGAGAAAGTGGCGATGCAATGTAAAGAGAACATTTATGCGATACAGACATTAAAGGATTTCCAGTACATGGAAGAAGGAAAGGATCAGGGTCTCAACGTGCGGGAGAAGGCGAAGCAGCTGGCCAATCTACTGAAAGACGACGAGCGGCTGAAGAATGAGCGCGCGCGGGCGCTCAAGGCCAAGCAGCGGTTCGCGCAGAGCGCCAGCGCCTTCGGCAGCGACGGCGCACTCGACACGCCCTCCAGCCCCACCTTCCCCTCCGGCGAGTCGGGGTCGTGGGGGGGCTCGGCGGGGGGCGGCGCGGAGGGGGTGGACGGGGCGGCGGAGCTGGCGCGGCCGCTGACGGCGGGGGAGGAGGAGCTGCAGCTGCAGCTGGCGCTGGCCATGAGCCGCGAGGAGGCGGAGCGGGAGGAGCGCCGCAGGAGGTCGGACGACGTGCGCCTGCAGCTCGCCATCAGCCAGTCGCAGCACGACTTCCAGACGAGTCCGGTGGAGGCGGCGGCGGAGCGCTCGCAGTCCCACCTGCTGGACCTGCTGGATGTCAACCTGTCCCCCGCCGCCCCGCCCCCCCGCGCCGCGCCCCTCGACCCCTGGGCCCTGCCGCACCCGGACACGCGCGCGGATCCATGGGGCGGCCCTCCTCTCGGTCCGCCGCTAGGCCCTCCGTTGGGTCCGCCGCTGGGTCCTCCGCTGGGTCCTCCGCTGGGAGACCTCCGTGACCCCTGGCCCCCCGCCGACCCCTGGGCGCCCCTAGAACAGAGTAAATCCCCGCAGTCGGTGCTGTCCTCGGGCTCCTCCTCGGAGCTGGAGCAGTTCGACGCGCTGTCGCAGCGCCGCGGCGCGCCCCCGCCCGCCGCCGACCCCTTCGACCTCTCCGCCCTGGGTCGGTATTATATTGTGTTAAGAATACTATTGAGTTATATCCAACCGAAAGATGAATCTATTGGACTTGATAGATATAGAAACTCTTTATCAAAAGAAAAGAAAACATATATAAATAGAGAGCAGTCACAATAG
Protein
MPRARDEMQVNVAGLRRNIKNLAHNYSDAQVKVREATSNDPWGPSSTLMAEIADLTYNVMAFTEIMQMIWKRLNDHGKNWRHVYKALVLMEYLIKTGSEKVAMQCKENIYAIQTLKDFQYMEEGKDQGLNVREKAKQLANLLKDDERLKNERARALKAKQRFAQSASAFGSDGALDTPSSPTFPSGESGSWGGSAGGGAEGVDGAAELARPLTAGEEELQLQLALAMSREEAEREERRRRSDDVRLQLAISQSQHDFQTSPVEAAAERSQSHLLDLLDVNLSPAAPPPRAAPLDPWALPHPDTRADPWGGPPLGPPLGPPLGPPLGPPLGPPLGDLRDPWPPADPWAPLEQSKSPQSVLSSGSSSELEQFDALSQRRGAPPPAADPFDLSALGRYYIVLRILLSYIQPKDESIGLDRYRNSLSKEKKTYINREQSQ

Summary

Pfam
PF01417   ENTH
Interpro
IPR039416   Epsin_ENTH        + More
IPR003903   UIM_dom       
IPR013809   ENTH       
IPR008942   ENTH_VHS       
IPR027319   Epsin-2_metazoa       
SUPFAM
SSF48464   SSF48464       
Gene 3D
PDB
1H0A     E-value=5.00237e-62,     Score=603

Ontologies

GO

Topology

Length:
436
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.02513
Exp number, first 60 AAs:
0.01489
Total prob of N-in:
0.01429
outside
1  -  436
 
 

Population Genetic Test Statistics

Pi
247.700551
Theta
192.986408
Tajima's D
0.985411
CLR
0.145606
CSRT
0.654767261636918
Interpretation
Uncertain
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