Gene

KWMTBOMO10021  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA005702

Annotation

PREDICTED:_nuclear_pore_complex_protein_Nup85_[Amyelois_transitella]

Location

Bomo_Chr17(-):493477-501879      View in EpiBrowser

Full name

Nuclear pore complex protein Nup85       + More
Nuclear pore complex protein Nup75      

Alternative Name

Nucleoporin Nup85

Location in the cell

Mitochondrial   Reliability : 1.243 PlasmaMembrane   Reliability : 1.343

CDS

ATGAATATAACGACTTTTTCTAACAATAATGTTCGTGGCGATGATAGTAGTCCTATTATTCGAGCTAAAACATTTAATATACCAGAAAAATGTTTCAATAAGGGCGTAGGATGTGCGTGGAGGAGTGGTAACAAGTTTTCTATCTACCCACGCAGTCAAACTGTTTCGAAAACACCAAAAAATGATGTCGAAAACAAAATACTCAATATACGTCACGAGATTGTATTATTTCATCCGATTTTACGAAAACTGGTAAACGAATCCAATGGTACATATTTATCTCTGCAGAAACTCGTCGATTCTTCAAAAAATAATGACAATCACGTGGAATTATTAAAACTTTCACGACAATATCGTTCTATTATAAGAGTGTGCATTGAAAACTTGCAAGAAGCCCTTAATGATGCGAAAGACGGCAGCGACATGATCAATTTACAATCATACATTACAATATTTTATTCTGTTGAATGTATTTGGCATTTATGTGAGATCCTTTACATAGATAAGATTCCCGGAGACATTGTGTTGCCATACCTCCTAGAATGGGTTCGATTCCATTTTCCGTGCCATGAGCAGACTGCAGCGCAGTTGCTGGAGGCCTGTGAGCGAGGTTCAGAAGACCACGATGACTATTGGGATACTGTGATTGGCATGGTTGTGCAAGGGCGAGTAGATGTCGCCCGAGCTCTACTGAAATTAAATTCATTATCAGAAACAAATGAATTTAAGCTTGTTGATAATTCATTACGGAGTATGCCTGTTTATAGTATATATGGTGGTATATCAACTGGGGAGTTTACAGTAACTTGGAAGCATTGGCAGGCTGAATGCAGAGCTAAGGTTACTAGCAGAGTGTTGGCATCACAACCAAAACTTGAACTTATTATGAGATTAATCATAGGAGAATATTCAGCATTTGAGTCAATACGTAGCACATACACATCGTGGTTTGATATGTTGGGAGGCTACGTAATGTTCACAGCACCTTGGTCTAGGACTCATGAGTTGTCTGCTGCAGCATCGGCCTGTGCTGGAATGGGATCTATGCCCTCAGGCTCTAGGCTGGATAGGACTTTACGGGCATTGTTGGAAGGTGATATGCATCAAGTAATTCATGAAATCCAGCATATAACAGATAATGGATGGTTTGCAACACATCTATCAGACATATTGTATCATTGTGGAAAATTAAAAGTATTGGATAAACACCAAAATAATGTAACTCAACGTCTCCGAGACAGTTTAATTCTTGAATATGGAACCTTGATAATGGAGCACAAGTCACTCTGGTCCGTCGGACTATCCTACCTTGCTTCATGTCCCCCTGAAGGTCTATGCCGAGCTCATTTGTTGCTAGAGAGGATTCCGATCAATACTCATGCCAAAGCTATGAGGGTTGTTGCTGAAGCTAATAAATATGGACTTTTGGAAGTTGGCGAGGGCGTGTGGCGCGTGTTGTCGGGGCGGCACAGCGCGGCGGGGCGGGACGGCGCGGCGCTGAGCGCGGCGGTGCGCGGCGGCGCGGCGGGGCGGGCGGGGCGCTGCGCCGGGGCCGCGCTGCGCCACTACTGCCGCACCGGCTGCCTGCCCGCGCCGGACCTGCTGCTCACCGCCGGACCGGCGCTGCTCATTGACGACACTCTACTCTTCTTAGGTAAATATTGTGAATTTCACCGCATGTACAAGAATAAAGAGTTCCGAAAAGCCGCACAGCTCCTCATATCGCTCATCACATCTAAAATAGCCCCGGATTTTTTCTGGGAAACCTTACTGCTAGATGCTCTACCGCTATTGGAATCTGACGAGGCCATGTTCACGGCAGATGACACATACGATATGATGCTGTGCCTTGAGCTACGAGCCCAGAACTTCAACCGAGAGAAAGCGGAACTCCTCAGATTGGCTTTACTTAGGAACCTGGCACGGACTGCACTAGCCGAGAAACCTGAAGAAAGTACTCAGTGA

Protein

MNITTFSNNNVRGDDSSPIIRAKTFNIPEKCFNKGVGCAWRSGNKFSIYPRSQTVSKTPKNDVENKILNIRHEIVLFHPILRKLVNESNGTYLSLQKLVDSSKNNDNHVELLKLSRQYRSIIRVCIENLQEALNDAKDGSDMINLQSYITIFYSVECIWHLCEILYIDKIPGDIVLPYLLEWVRFHFPCHEQTAAQLLEACERGSEDHDDYWDTVIGMVVQGRVDVARALLKLNSLSETNEFKLVDNSLRSMPVYSIYGGISTGEFTVTWKHWQAECRAKVTSRVLASQPKLELIMRLIIGEYSAFESIRSTYTSWFDMLGGYVMFTAPWSRTHELSAAASACAGMGSMPSGSRLDRTLRALLEGDMHQVIHEIQHITDNGWFATHLSDILYHCGKLKVLDKHQNNVTQRLRDSLILEYGTLIMEHKSLWSVGLSYLASCPPEGLCRAHLLLERIPINTHAKAMRVVAEANKYGLLEVGEGVWRVLSGRHSAAGRDGAALSAAVRGGAAGRAGRCAGAALRHYCRTGCLPAPDLLLTAGPALLIDDTLLFLGKYCEFHRMYKNKEFRKAAQLLISLITSKIAPDFFWETLLLDALPLLESDEAMFTADDTYDMMLCLELRAQNFNREKAELLRLALLRNLARTALAEKPEESTQ

Description

Functions as a component of the nuclear pore complex (NPC).

Subunit

Component of the nuclear pore complex (NPC).

Similarity

Belongs to the nucleoporin Nup85 family.

Uniprot

H9J860   A0A2A4JTY9   A0A2W1BDW9   A0A212FF43   A0A0N0PDV8   A0A194QAU0   + More
D6WUN5   A0A1W4WWR0   J3JZJ7   A0A0C9RRP8   A0A232F2F9   K7IZ68   A0A1Y1LCD5   U4UCW5   A0A2J7QAI3   E9ILL6   E2BQ39   A0A067RBY6   E2A230   A0A195F910   F4WFC2   A0A158NCN6   A0A195CG66   A0A151XF36   A0A0L7R102   A0A3L8D3Q4   A0A0T6B2G1   A0A088A8J6   A0A2A3E3D4   A0A026VXJ3   A0A0M9A590   A0A1I8NLQ6   A0A1B6GHG6   A0A0K8TWZ2   W8BWM4   A0A1I8MCV3   A0A034VNQ2   A0A0A1X0B0   A0A1B6DZI9   A0A1L8DXE2   E0VCB4   B0WI27   Q16KI2   A0A1Q3F1J2   A0A182HB70   A0A2P8YJZ7   A0A1J1I3J6   A0A1B6L7M7   A0A1A9VQW1   A0A1A9W0U1   A0A195BYM2   A0A1A9Z0L4   A0A195EM98   A0A1B0GBI6   A0A1B0BYI5   A0A0P5XKQ7   A0A0N8CSH8   A0A0P5KET1   A0A0N8B669   A0A0P5V7M5   A0A0N8AG70   A0A0P4XYD5   A0A0P6GML0   A0A336M568   A0A0N8BLU2   A0A0N8E845   A0A0P6E8K6   A0A336MU20   B4LKX5   A0A3Q3GR61   A0A3Q3GTH7   A0A0P5DIJ6   A0A0P5TYW5   A0A0P6A7Z2   A0A0P5UTT0   A0A0P5WQQ6   A0A0P5BVZ7   A0A0P5STU0   A0A0P5C3T7   A0A0P5VDT2   A0A0P5X226   A0A0P5I5D8   A0A0P6H4Z2   A0A0P6IR56   A0A0P6G969   A0A3B4TBL9   W5N750   A0A0P5WG31   A0A0P5ZG10   A0A0P5B5Y7   W5N743   A0A2U9CQF3   A0A3Q1JWV5   A0A0P5AEH7   A0A0P5WLG6   A0A0P5YZE4  

Pubmed

19121390    28756777    22118469    26354079    18362917    19820115    + More
22516182    28648823    20075255    28004739    23537049    21282665    20798317    24845553    21719571    21347285    30249741    24508170    24495485    25315136    25348373    25830018    20566863    17510324    26483478    29403074    17994087   

EMBL

BABH01039826    BABH01039827    NWSH01000621    PCG75246.1    KZ150306    PZC71497.1    + More
AGBW02008849    OWR52371.1    KQ460044    KPJ18315.1    KQ459232    KPJ02549.1    KQ971363    EFA07823.1    BT128679    AEE63636.1    GBYB01010046    JAG79813.1    NNAY01001222    OXU24689.1    GEZM01061334    GEZM01061333    JAV70558.1    KB632061    ERL88426.1    NEVH01016330    PNF25587.1    GL764129    EFZ18439.1    GL449694    EFN82227.1    KK852804    KDR16208.1    GL435917    EFN72514.1    KQ981727    KYN36928.1    GL888115    EGI67173.1    ADTU01012001    KQ977791    KYM99712.1    KQ982215    KYQ58945.1    KQ414669    KOC64476.1    QOIP01000014    RLU15030.1    LJIG01016187    KRT81355.1    KZ288419    PBC25994.1    KK107609    EZA48492.1    KQ435732    KOX77505.1    GECZ01007890    JAS61879.1    GDHF01033310    JAI19004.1    GAMC01012960    GAMC01012958    GAMC01012955    GAMC01012951    JAB93604.1    GAKP01015779    JAC43173.1    GBXI01012657    GBXI01009735    JAD01635.1    JAD04557.1    GEDC01006224    JAS31074.1    GFDF01002966    JAV11118.1    DS235051    EEB11000.1    DS231941    EDS28109.1    CH477957    EAT34798.1    GFDL01013619    JAV21426.1    JXUM01031797    JXUM01031798    JXUM01031799    KQ560936    KXJ80270.1    PYGN01000541    PSN44565.1    CVRI01000040    CRK94771.1    GEBQ01020280    JAT19697.1    KQ976396    KYM93033.1    KQ978691    KYN29251.1    CCAG010014016    JXJN01022668    GDIP01082953    JAM20762.1    GDIP01103223    GDIP01053401    LRGB01001411    JAM00492.1    KZS11984.1    GDIQ01210951    JAK40774.1    GDIQ01208907    JAK42818.1    GDIP01105930    JAL97784.1    GDIP01150577    JAJ72825.1    GDIP01235134    JAI88267.1    GDIQ01031477    JAN63260.1    UFQT01000574    SSX25414.1    GDIQ01165123    JAK86602.1    GDIQ01052508    JAN42229.1    GDIQ01072191    JAN22546.1    UFQT01002523    SSX33620.1    CH940648    EDW60779.1    GDIP01155693    JAJ67709.1    GDIP01120589    JAL83125.1    GDIP01034345    JAM69370.1    GDIP01108428    JAL95286.1    GDIP01082952    JAM20763.1    GDIP01183291    JAJ40111.1    GDIP01169080    GDIP01140642    JAL63072.1    GDIP01191584    JAJ31818.1    GDIP01103224    JAM00491.1    GDIP01078450    JAM25265.1    GDIQ01220000    JAK31725.1    GDIQ01024554    JAN70183.1    GDIQ01002830    JAN91907.1    GDIQ01039511    JAN55226.1    AHAT01000429    GDIP01087289    JAM16426.1    GDIP01044595    JAM59120.1    GDIP01193582    GDIP01060999    JAJ29820.1    CP026261    AWP18828.1    GDIP01200884    JAJ22518.1    GDIP01084748    JAM18967.1    GDIP01051004    JAM52711.1   

Proteomes

UP000005204    UP000218220    UP000007151    UP000053240    UP000053268    UP000007266    + More
UP000192223    UP000215335    UP000002358    UP000030742    UP000235965    UP000008237    UP000027135    UP000000311    UP000078541    UP000007755    UP000005205    UP000078542    UP000075809    UP000053825    UP000279307    UP000005203    UP000242457    UP000053097    UP000053105    UP000095300    UP000095301    UP000009046    UP000002320    UP000008820    UP000069940    UP000249989    UP000245037    UP000183832    UP000078200    UP000091820    UP000078540    UP000092445    UP000078492    UP000092444    UP000092460    UP000076858    UP000008792    UP000261660    UP000261420    UP000018468    UP000246464    UP000265040   

PRIDE

H9J860   

Pfam

PF07575   Nucleopor_Nup85

Interpro

IPR011502   Nucleoporin_Nup85       

ProteinModelPortal

H9J860   A0A2A4JTY9   A0A2W1BDW9   A0A212FF43   A0A0N0PDV8   A0A194QAU0   + More
D6WUN5   A0A1W4WWR0   J3JZJ7   A0A0C9RRP8   A0A232F2F9   K7IZ68   A0A1Y1LCD5   U4UCW5   A0A2J7QAI3   E9ILL6   E2BQ39   A0A067RBY6   E2A230   A0A195F910   F4WFC2   A0A158NCN6   A0A195CG66   A0A151XF36   A0A0L7R102   A0A3L8D3Q4   A0A0T6B2G1   A0A088A8J6   A0A2A3E3D4   A0A026VXJ3   A0A0M9A590   A0A1I8NLQ6   A0A1B6GHG6   A0A0K8TWZ2   W8BWM4   A0A1I8MCV3   A0A034VNQ2   A0A0A1X0B0   A0A1B6DZI9   A0A1L8DXE2   E0VCB4   B0WI27   Q16KI2   A0A1Q3F1J2   A0A182HB70   A0A2P8YJZ7   A0A1J1I3J6   A0A1B6L7M7   A0A1A9VQW1   A0A1A9W0U1   A0A195BYM2   A0A1A9Z0L4   A0A195EM98   A0A1B0GBI6   A0A1B0BYI5   A0A0P5XKQ7   A0A0N8CSH8   A0A0P5KET1   A0A0N8B669   A0A0P5V7M5   A0A0N8AG70   A0A0P4XYD5   A0A0P6GML0   A0A336M568   A0A0N8BLU2   A0A0N8E845   A0A0P6E8K6   A0A336MU20   B4LKX5   A0A3Q3GR61   A0A3Q3GTH7   A0A0P5DIJ6   A0A0P5TYW5   A0A0P6A7Z2   A0A0P5UTT0   A0A0P5WQQ6   A0A0P5BVZ7   A0A0P5STU0   A0A0P5C3T7   A0A0P5VDT2   A0A0P5X226   A0A0P5I5D8   A0A0P6H4Z2   A0A0P6IR56   A0A0P6G969   A0A3B4TBL9   W5N750   A0A0P5WG31   A0A0P5ZG10   A0A0P5B5Y7   W5N743   A0A2U9CQF3   A0A3Q1JWV5   A0A0P5AEH7   A0A0P5WLG6   A0A0P5YZE4  

PDB

5A9Q     E-value=8.6976e-87,     Score=819

KEGG

101739405    K14304 nuclear pore complex protein Nup85 | (RefSeq) nuclear pore complex protein Nup85

PATHWAY

03013    RNA transport - Bombyx mori (domestic silkworm)

GO

GO:0051028   GO:0031080   GO:0017056   GO:0031965   GO:0015031   GO:0006406   GO:0006606   GO:0045893   GO:2000331  

PANTHER

PTHR13373  

Subcellular location

  

Length:

654

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.26318

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00668

outside

1  -  654

 

 

Pi

228.091546

Theta

191.51148

Tajima's D

2.179472

CLR

0.34447

CSRT

0.909204539773011

Interpretation

Uncertain