SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO10013
Pre Gene Modal
BGIBMGA005706
Annotation
PREDICTED:_ESF1_homolog_[Bombyx_mori]
Location in the cell
Nuclear   Reliability : 4.458
 

Sequence

CDS
ATGCTTGATATTTTTTCTTTTCAGGTGGAAGATTACGATAGCGAAGAAGAAAGGCTCAGAGAAGAAGAGAAGGCAAGGAAGAGACAGGTGCACGCTAGAGTTAGTTCATACTGGAGTCTTCAGTGGCCCTGGGTCAGCAAGCGAAAGATCATCTACCGAGAATCGAACTGCTATTTGGTGCCCAGCAAATATGAGGAGAAACATAGAGACAAATTTCCACCTCAACCGATGCAAAGATTCCAAGATGATATAGTCCTTCACAGCGCAAAAGACACGTCCAAAAACAGAGTCCGTGGTGAGAAGCTAATGGAAGAAAAAAATCAGCTTTCAACTGAACCAAACACAAAGCTCACTAACGGTGTTACTAATGGTCATGAAGAAGAAGAAGAAGAAGACAATAATACTGCAATAAATGAGGATGATAGCCAAGAAGATTTATCACTTAAGAGCTCAGGTTCTGATACTATTCAAAATGATGAAGTCATTAATGATAATGTTGTCAATAAAGATGAAAATGAACCGATTTCCCAAGAATCAGAAACAAGTGATAAGCCTAACGATAAAGAAGAAGAAGAAGAAGAAAAAGTTAACGCAGAAGAAACTGATGCAATGGATGTCTTAGAAGAATCCAGTAACGGTTTTCAAGATTTATCTCAAGAGATGATTAAAGATAATGATTTACTTAAAGCAGAAGATGACAATAACATTATCGATAGTATATTAAGTGATAACGGCCAGAACATGGAGAATTTGGAAGCCATGAATGAAAGATAA
Protein
MLDIFSFQVEDYDSEEERLREEEKARKRQVHARVSSYWSLQWPWVSKRKIIYRESNCYLVPSKYEEKHRDKFPPQPMQRFQDDIVLHSAKDTSKNRVRGEKLMEEKNQLSTEPNTKLTNGVTNGHEEEEEEDNNTAINEDDSQEDLSLKSSGSDTIQNDEVINDNVVNKDENEPISQESETSDKPNDKEEEEEEKVNAEETDAMDVLEESSNGFQDLSQEMIKDNDLLKAEDDNNIIDSILSDNGQNMENLEAMNER

Summary

Uniprot
Pfam
PF00595   PDZ
Interpro
IPR036034   PDZ_sf        + More
IPR001478   PDZ       
SUPFAM
SSF50156   SSF50156       
ProteinModelPortal

Ontologies

GO

Topology

Length:
257
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00016
Exp number, first 60 AAs:
0.00016
Total prob of N-in:
0.01033
outside
1  -  257
 
 

Population Genetic Test Statistics

Pi
217.461396
Theta
172.099313
Tajima's D
1.384824
CLR
0
CSRT
0.75631218439078
Interpretation
Uncertain
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