SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO10012
Annotation
blastopia_polyprotein_[Lasius_niger]
Location in the cell
Nuclear   Reliability : 4.125
 

Sequence

CDS
ATGCATGGGAAAGTTGAAGACGAAGCTATCATAGAATACGTGATAGATGGTATCCGTGACTCTGAAACAAACAAATCTATTTTATACGGAGCTACCGACATGAAACAATTCCGAAAGAAACTGGAAGTATACACACAAATAAAGGAAAAGATGCACCATAAGGCTGCTGCTCAGATTACACCCACGACGATTACAGGACGCAAGCCCGTGTACACTAAGAGATGTTACAACTGCGGTGATTCTAGCCACCAATCATCGGCATGCACAAATGGAATAAAATGTTTCAAATGTAACGAATACGGACACAAATCAAACGAATGTCAGAGTACGATGAAGAAGACACTTAAAATCCAAGATGTAAGCGACTTTACTTCGAATCTTCGTCAGCCATACAAGAAAGCCAAGATTAATGATATTGAAGTTACTACTTTTCTTGACACCGGAAGCGATGCAAATTTAATTCGAGAATGCTATTATAGAGAAGTACTGTCAAAGGATAATGACTACGATCCGAACAATACACTTAATTTATCAGGAATAGCCGAGCATGAAGTACGCACAAAAGCATCTTTTACAGCTAGAATTGAAATGGATGATGTGACTTTTGAAACAAAGATTAATGTGGTAGACGATGACGTAATACCGGTTAATATTTTACTCGGAAATCCGATATTGAACGAAATTGAAATTGCATTTTCCGCTTATGGAATTTCAGTGAAGAAGATATTACACCTGACTCAGATTAATGATTACAAAGAAGAACTTACAGACAAATATGATATTAAGACGATGAAATATAAAGACACAATTAAGAAATTACTGGAAGACTATGATGATTTAAAGACTACGACGAAAGAATCAAATGTAAAACTTAAAATTATACTTACCAATGAGGATCCGATTCACCAGACTCCCCGAATACTCTCACCTCTAGAGTTAAACATAGTAAATAAACAGATAGAAGAATGGTTAGATCAAGATGTAATAAAAGCAACAAAGCCACTGACTGATTTACTCAAGATGGATGTAAACTTTGATTTTGACATTAACTGCGAAAGAGCTTTTGAAAAATTAAAACAGATTTTGTGTGGTTCACCAGTTTTACGCATTTACGATTCGAATCTCGAAACAGAGTTACATACAGATGCAAGCATAGATGGCTACGGAGCCGTTTTATTGCAGAGAAGCCCAAAAGATAACCAGCTGCACCCGATATACTACATGAGCAAAAAGACTACTCCTGCAGAAAAGAAATATCACAGCTACTATCTGGAAATTTTAGCAATTGTAGAAGCAATAAAGAAATTTAGAGTTTATTTACTTGGAATTCGTTTCAAAATTATAGCAGACTGTTCTGCTTTAACCATGACGCTACAGAAAAAAGACTTACCTCATAGAGTTGCTCGCTGGGCACTCCTCCTGGAAGAATTTGATTACAAAATTGAACACCGATCCGGAACACAGATGAGACATGATACTTTGAGCAGATACCCTGTTAGCCTGATACTTACCGAAACTACTGCACGCCTGAAAAGAGCACAAGATGATGACCTGAAAATAAAACTATTAAAGAAGTTGTTAGAAAGAGAACCTTATGAAGATTTTGTACTAGAAAATGGAATATTGTGTAAAGTTAAAGATGGGCCTAGACTTATTGTTGTACCTAAGAAGATGATAAATGAGATAATAAGAAAATGTCACGAGAAAGGCCATTTCGAAATTATAAAGACGGAAGAATTACTAAACCGAGACTACTACATTGAAAATAGCAAAGAGAAGATACGATCAATTATTGATAATTGCGTGGAATGCATATTAATTTCGCATAAAAAAGGAAGGAAAGAAGGATATTTACACCCGCTTGATAAAGGGGACACTCCATTGTCTACTTACCATGTTGATCATCTTGGTCCTTTGACATCTACGAATAAGAATTACAAATACATTTTTACTGTTGTAGATAGTTTCACAAAATTTACGTGGATCTACCCAACCAAAACTTTATCGACGGAAGAAGTACTACAAAAACTCAGATTGCAACAGGAAACTTTCGGTTCTCCAGAGCGAATTATAACAGATCGTAATGCTGCTTTTACTTCTAATGATTTCAAAACATACTGTAACGAAGAAAACATAACACACTATGTAATAACTACCGGTTAG
Protein
MHGKVEDEAIIEYVIDGIRDSETNKSILYGATDMKQFRKKLEVYTQIKEKMHHKAAAQITPTTITGRKPVYTKRCYNCGDSSHQSSACTNGIKCFKCNEYGHKSNECQSTMKKTLKIQDVSDFTSNLRQPYKKAKINDIEVTTFLDTGSDANLIRECYYREVLSKDNDYDPNNTLNLSGIAEHEVRTKASFTARIEMDDVTFETKINVVDDDVIPVNILLGNPILNEIEIAFSAYGISVKKILHLTQINDYKEELTDKYDIKTMKYKDTIKKLLEDYDDLKTTTKESNVKLKIILTNEDPIHQTPRILSPLELNIVNKQIEEWLDQDVIKATKPLTDLLKMDVNFDFDINCERAFEKLKQILCGSPVLRIYDSNLETELHTDASIDGYGAVLLQRSPKDNQLHPIYYMSKKTTPAEKKYHSYYLEILAIVEAIKKFRVYLLGIRFKIIADCSALTMTLQKKDLPHRVARWALLLEEFDYKIEHRSGTQMRHDTLSRYPVSLILTETTARLKRAQDDDLKIKLLKKLLEREPYEDFVLENGILCKVKDGPRLIVVPKKMINEIIRKCHEKGHFEIIKTEELLNRDYYIENSKEKIRSIIDNCVECILISHKKGRKEGYLHPLDKGDTPLSTYHVDHLGPLTSTNKNYKYIFTVVDSFTKFTWIYPTKTLSTEEVLQKLRLQQETFGSPERIITDRNAAFTSNDFKTYCNEENITHYVITTG

Summary

Uniprot
ProteinModelPortal
PDB
4OL8     E-value=3.66264e-15,     Score=201

Ontologies

Topology

Length:
720
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00737
Exp number, first 60 AAs:
0
Total prob of N-in:
0.00040
outside
1  -  720
 
 

Population Genetic Test Statistics

Pi
79.995118
Theta
78.516813
Tajima's D
-1.887329
CLR
11.755596
CSRT
0.0230488475576221
Interpretation
Uncertain
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