SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO10002
Pre Gene Modal
BGIBMGA014426
Annotation
hypothetical_protein_KGM_18548_[Danaus_plexippus]
Location in the cell
Cytoplasmic   Reliability : 1.175 Mitochondrial   Reliability : 1.494 Nuclear   Reliability : 1.06
 

Sequence

CDS
ATGAGCGCGGAGCGAGTGCTGGACGCGCAGACGTGGCCCGCGGAGGCCGAGGCGGCCATCGGCGACATCCGGCGCCACGTCCGAGCCGCCAGCGTCTCCTCGCGCCTGCGCAGCCACCACCGCATCTACATCAACCTCACCACGCTCGAGGACCACACCTACTGCATCGAGATGTCGGCGGCCGGCTTCCGCGTCGTCGGCCGGAAGTACGACGACGTCAGCCTCACCGGGCACGTCAACTATGAGACTCCCTACGCGCTGCTCAATAACATCAGCCAGAAATACAAGGAGTCGTTCGGCGACGAACTGATGACCAAACTATTGCATCTCGCCGGTGCCCCAGAGGGCCGATGA
Protein
MSAERVLDAQTWPAEAEAAIGDIRRHVRAASVSSRLRSHHRIYINLTTLEDHTYCIEMSAAGFRVVGRKYDDVSLTGHVNYETPYALLNNISQKYKESFGDELMTKLLHLAGAPEGR

Summary

EMBL
BABH01041431    NWSH01002896    PCG67349.1    GDQN01002971    JAT88083.1    AGBW02014621    + More
OWR41320.1    ODYU01007795    SOQ50860.1    KQ977408    KYN02957.1    GEZM01080354    JAV62198.1    GL440194    EFN66177.1    KQ978691    KYN29219.1    KQ434878    KZC09929.1    LBMM01019915    KMQ83423.1    KQ981727    KYN36957.1    KK107077    QOIP01000010    EZA60561.1    RLU17329.1    GL764129    EFZ18441.1    KQ982490    KYQ55803.1    AK402161    BAM18783.1    GL888115    EGI67204.1    GDRN01053101    JAI66197.1    KQ976396    KYM93002.1    ADTU01011960    KQ971321    EFA00669.1    GL449158    EFN83206.1    GDIQ01000990    JAN93747.1    GDIP01009943    JAM93772.1    GL732585    EFX74174.1    NEVH01008202    PNF34867.1    GEDC01027937    GEDC01009918    JAS09361.1    JAS27380.1    GEDC01030632    GEDC01030115    GEDC01021207    JAS06666.1    JAS07183.1    JAS16091.1    KQ414629    KOC67313.1    KZ288197    PBC33736.1    JR049816    AEY61087.1    KK852743    KDR17363.1    APGK01053704    KB741231    KB632387    ENN72268.1    ERL94367.1    UFQS01002152    UFQT01002152    SSX13348.1    SSX32782.1    GECU01031973    JAS75733.1    GECZ01003899    JAS65870.1    NNAY01001817    OXU22828.1    KK856007    PTY24609.1    GEBQ01018750    JAT21227.1    JH431984    GECL01001141    JAP04983.1    GDIP01130812    JAL72902.1    GDHF01021305    JAI31009.1    GFDF01011415    JAV02669.1    GAKP01012198    JAC46754.1    KQ435699    KOX80612.1    GFTR01001916    JAW14510.1    GANO01003607    JAB56264.1    CCAG010004106    JXJN01000907    GDKW01002474    JAI54121.1    ACPB03007275    AAAB01008968    APCN01005308    AHAT01003751    AMQN01001497    KB303020    ELU03636.1    GGFJ01010621    MBW59762.1    GBHO01021587    GBHO01021586    GBHO01021584    GBRD01001288    GBRD01001287    JAG22017.1    JAG22018.1    JAG22020.1    JAG64533.1    GAMC01017433    GAMC01017430    JAB89125.1    GGFL01001534    MBW65712.1    CM000363    CM002912    EDX11482.1    KMZ01154.1    AE014296    AY118463    KX531506    AAF51815.1    AAM49832.1    ANY27316.1    MUJZ01035882    OTF76766.1    GDHC01001815    GDHC01000340    JAQ16814.1    JAQ18289.1    GGFM01005851    MBW26602.1    AEYP01037802    AAEX03005968    AXCM01002532    JARO02006267    KPP65499.1    JP023831    AES12429.1   
Pfam
PF05303   DUF727
Interpro
IPR037395   GSKIP        + More
IPR007967   GSKIP_dom       
IPR023231   GSKIP_dom_sf       
Gene 3D
PDB
1SGO     E-value=1.05446e-08,     Score=136

Ontologies

Topology

Length:
117
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00239
Exp number, first 60 AAs:
0.00179
Total prob of N-in:
0.24743
outside
1  -  117
 
 

Population Genetic Test Statistics

Pi
13.797402
Theta
49.263019
Tajima's D
-2.179539
CLR
741.452044
CSRT
0.00649967501624919
Interpretation
Uncertain
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