SGID The Silkworm Genome Information Database
Gene
KWMTBOMO10001
Pre Gene Modal
BGIBMGA014421
Annotation
PREDICTED:_dynein_heavy_chain_3?_axonemal_[Bombyx_mori]
Full name
Dynein heavy chain 3, axonemal      
Alternative Name
Axonemal beta dynein heavy chain 3
Ciliary dynein heavy chain 3
Dnahc3-b
Location in the cell
Cytoplasmic   Reliability : 2.041
 

Sequence

CDS
ATGTGCATCAAGCGTCCTCTCGTCCGGATCAAGGTCGTAGGTCATCCGGGCACCACGAACATCACCTTCGAGCCGACCCTGGATCAGATGAGGGTTATGATCGTCAAATGGTTCCACAGTATCATCAGCGTGAACCATCAGCTGCCCAGCCTCGACACCATCTTGTATCCAGGCTCCTCGCGTCCGAACCCCTACCTGATGGCGGTGTACCCGGACGAGAGCTACATGCAGCAGGTGGTGGGCCGCTCCCTGCACCACTTCGCCGCGAACCGGCCGGGCCCCGTCAGCTTCCTCGCCAGCTACCAGCCCTACCACTACATCCTCGACGGCCGCGCCGCTCAAGAGTTACAGCAGTTTTTCGCACAAGAGCCACCGCCTTATTTGAAAGATTTCTCGGCTCGCATCTACATGTACGAGGAGCTCCGCGATGAGATCCTGTTCCTGCGCCGTGACATCCCTCTCAACATGGTGATGCTGGACTGCGCCCCCGTCAACGACTGCATGTGGGACGCCGTGGACGGCCTGCGACGTCACATCGTTGACCACTTTATCGCCGTCAACAGAAAATGGAATCGAGACATCTGCAACGTGTACGAGGAGATGGCAGCGCGCGCGTCGGAGAGCCCGGAGACGACAGCGCAGCTGGTGGAGCTGATCGGCTACATCCAGGACTGCCGCGACTGCGCCATGTTCGACTTGCGCGAGAAGGCACGCACCACGGCTGAATATGTGCTGTTCTTGATGCAGCACGCGCATCTGCACTTTGAAGATGTAAATTTAAACACCCGTGTGTTTCTGTGGCCGCTCGACATGGACGAGACCATAGACTTGACGCTTAAAACTCTCAATACGAAAAAAACCATGGCCGAAGACAAACTGAGGAGCAGAAAAGCTATATTTGAAGAACAACTCAAAAAACATGAAAAGGATTTGGAGGTGTTCCGCAGATTCGACCCTCCGTTGCTCAACGTGGACTTGCTCCGAGAGGTCGTCGGAAAGGTCGACGAGATATTCAATAATCTAATGGAAGACAAGCACGAAGCGGACGACATCATAAACGAGGAGCAGCTGCTGGAGCAGGACGTGTCGGTGTACTACAGTCTGCAGACGATGCTGGCGGGCATCGAACCCTTCCACAAACTCTGGCACACTGCGTACGACTTCTACGAAGGATACGAGAGATGGTATCACGGTCCTTTCCTCGGGCTGGACGCGGAAACGATATCGGAGGATGTGGAAGCTTGGTGGAAGTTACTATATAAACTCGGCAAACAGTTGTTTGAATACCCCGGAGCGAAGAGGATCGCGGACATGGTGCGGAACAAGCTCGAGAAGTTCAAAGTATTGTTGCCTGTCCTCTGCGCAATCTGCAACAAGGGAATGCGGGATCGTCACTGGGCCCGCATCAGCGAACTAGTGGGGATAGAGGTGATCCATGACCCAGAAACAACATTGGCTGACATGGTGGAACAAGGAGTACACGTATTCGCAACTCAACTCGAGGAAATAGAACAGTATGCATCCAAAGAATATGCGCTCGAGAAAGCGCTCACTAAGATGAAAGATGAATGGGTCGGAGTAAAGTTCGAAGTGGTGCCCTACAGGGACACTGGAGTCGGCATACTAACTGGCTTAGATGACATACAACAGCAATTAGATGACCACATCTTGAAATCGCAAACGATGCGTGGCTCACCTTATGTGAAAGCGTTTGAAGCGGACATGGTGTCCTGGGAAGAGAAGCTCATCAGCATGCAAGACATCCTGGATCAATGGTTGCAGTGTCAAGCGACTTGGATGTATCTGGAGCCTATATTTTCATCAGAGGATATAATGCGTCAAATGCCGACCGAGGCTCGCAATTTCCGCGACGTGGACAAGGAGTGGCGTACCATAATGGCGGCCACACAGAAGGAGCCCATGGTCCTCCCGGCGACAGACTACCCCGCACTGCTGAAAAAGCTGAAGTACAACAACTGCTTATTAGAGGATATTCAGAGAGGTCTCAATGATTATTTGGAAAAGAAGAGATTGTTCTTCCCGCGATTTTTCTTCTTGTCCAACGACGAGTTGTTAGAGATCCTCTCCGAAACCAAAGATCCGATGAGGGTACAGCCTCACCTGAAGAAATGTTTCGAAGGCATTTACACGTTAGAATTTAATGCAGCCAGAGAAATCATTGGAATGGCCTCTGCAGAAGGCGAAGTGGTCAAATTGTCTTCAACTATTCAACCGGCGGATGCTAAGGGCATGGTGGAGCGCTGGCTGCAGCAGCTGGAGCATCAGATGGTCGTGAGCCTCAGAGACGTGGCAGCCGAGGCCATCGCGGCATACAGCACGGCGGTGCGCGAGGAGTGGGTGTTGAGCTGGCCCGGACAGATAGTGCAGTCCGGCTCCTGCGTGCAGTACACCGCCGCGGCTATTGAAGCGATACAAGCGAACAGTCTGCCAGAGTTGGTGGAGCTCAGCACTAAGCAGATCACAGGGCTGGTGTTCTTGGTTCAAGGCGATCTAGAACCTGGGAACCGCATCACTGTCGAAGCTCTCATCGTCATAGATGTCCACGGACGTTCGATATTAGAAGAGATGGTCAGTCGGCGCGTCAGCAACACGTCGGACTTCAACTGGATATCGCAGCTGCGGTACTATGCGCGCGGGGACCGCATGACGTGCGCGATGATCACCACGGACGTGGAGTACGGCTTCGAGTACCTCGGCAACACCGGCCGCCTGGTCGCCACGCCGCTCACCGACCGCTGCTTCAGGACCCTCATGAGTGCCTTGAAATTGAATTTAGGCGGTGCTCCTGAAGGTCCAGCGGGCACTGGCAAGACTGAAACCACTAAAGACTTAGCCAAAGCCGTGGCTAAGAAGTGCGTCGTGTTTAATTGTTCCGACGGACTAGATTATAAAGCGCTCGGAAAATTCTTCAAGGGCTTGGCTCAGTCCGGTGCATGGGCGTGCTTCGACGAGTTCAACCGCATCGAACTAGAAGTGTTGTCGGTGGTCGCCCAGCAGATCCTCTCCATACAGCTCGCCATACTGCGCCGCGAGAAACGATTCATCTTCGAAGGCACCGAGATCAGTCTAAACCCCACTTGCTCGGTTTTCATCACAATGAACCCTGGATATGCCGGACGCACCGAGCTACCAGACAACCTCAAGGTATTGTTCAGAACGGTCGCTATGATGGTGCCCGACTACGCCATGATCGGTGAGATCACTCTTTACTCGAACGGATTCGTCAACGCCGGACCACTAGCACGTAAGATAGTGCAGGCATATAAATTGTGCTCGGAGCAGTTGTCCTCGCAGAACCACTACGACTACGGCATGCGGGCGGTGAAGTCGGTGCTGCTCGCCTCCGGGACGCTCAAGAAGAACTATCCGGAGCAGGAGGAAGCGCGACTCGTGTTGCGCGCTATCATCGACGTCAACATGCCCAAGTTTCTATCCCAAGACGTGCCTTTGTTCGCGGGAATCTATTCAGATTTGTTCCCTGGCGTGGAGATTCCGCAGCCGGACCGAAACGAACTCCTCAGTTGCATCAACAAAGAACTTGACAAACGGAACCTGCAGCCGACGGACTGGTATCTGGAGAAAATTATACAAATATACGAGATGATGCTGGTGCGACATGGATTCATGATCGTGGGCCCTCCCATGGGCGGCAAGACACAAGCCTACCAGAGCTTGGCCGATTCCCTTCGCGCGCTCCAACTCATGAAGCCGCCTCCGAGACACAAGGAATTTGGTGCAATCTACCGCATCATCAACCCAAAGGCTATCACCATGGGACAACTGTACGGCTGCTTCGATCCTGCATCGCACGAATGGTCGGACGGGGTGTTAGCGATAGCGTTCCGTGAGTACGCGACATCGTTGACGCGCGACCGCAAGTGGATCCTGTTCGATGGTCCGGTGGACGCGGTCTGGATCGAGAACATGAACACCGTGCTCGACGACAACAAGAAGCTCTGTCTCATGAGCGGAGAGATCATACAGATGACAAATAAAATGAATCTGATATTCGAGGCGGCGGACCTGGAGTTCGCTTCTCCGGCGACCGTTTCTCGCTGCGGCATGATCTACATGGAACCAGAACAACTAGGATGGCGCGCCTTCTTGTCATCTTACAACACGCAACTGAGCAAACGGCTGATTCCGGAGCAGTTCGATCTGATCCAGGAGCTGGTGGAGTGGCTGCTGCCTCCTGTGCTGGACTTCCTCTCGCAGCGCTGTCGACACTTCGTAAACGTGGGAGACATACACCAATTCCATTCATTCACCCGACTGTTCACCTGTCTACTGGAAGGAGAAGCTCAGTTCAGTACAGTGTGGCTGCAGTGCACCTTCGTGTTCGCGTTGGTCTGGGGACTCTGTGCTACTATCAACGGAGAAAGTCGGAAGTCATTCGATGTCTTCTTCCGAAAACTTCTGGACGGAAACAACGCCGCTTTCCCGAAACCGAAATCATTTAAACTGACGAAGAACCAGCTGTTCCAAGACAAAGACACAGTGTTCGACTACGTGTACGACAAGAGAAACAACGGAACGTGGATACCCTGGATGGAGCTCGAGAAGGAGCTCCCTCTGTCTCCTACCGCAAAGACGCAAGATATAATCATGTCTAAGGTCGACCGGCGTCGCAAAGGTGTGTTCGGTCCATCTATGGGCAAAAAGTGCGTGTTGTTCGTGGACGACCTGAGCATGCCCCAGAAGGAGCAGTACGGCGCGCAGCCCCCGCTGGAGTTGCTGCGGGAGTGGATCGACCACGGACACTGGTACGACCTCAAGGAGATGGTGCGCCAAGAAGTGGTCGATGTGTTGTTGGTGTCTGCGATGTTGCCCCCGGGCGGCGGCTCGAACCTGATCTCATCTCGTCTGACGCGCCACATGCTGCTCATCACGCTCGATTCTTTCGAAGACAACACGCTCAACAAGATATTTGGCACTATCATGGACTGGCACCTCTCCAAGGGATTCGTCGAGTCCCTCATGAGACAGAGCAAGAGCGTGGTGTCCGCGACGATGGAGGTGTACAAGGCGGCGACGGTTCAGTTTCTACCGACGCCGAGCAAGTGCCACTACTTGTTCAACTTGCGGGATTTCGCACGCGTCATCAAGGGCATACTGCTGGTTCCTTCCACTCACATGAAGGACCTCAATAAACTAGTCGTGCTGTGGATACACGAGACCTACCGCGTCTTCTACGACCGGCTTGTCGATGACACTGACAGACAGAAGTTGTTTGAGGTGGTGTACAAGGCGGTGTACGGGCACTACCGCGTGCACATGGACCAGGTCATGGCGGAGCTCGGCTACGTGCCCGAGGGAGAGAAGCTCGCCAACAAGCATGCCGCTAATATCTTCTTTGGAAACTACATGGAGCCCGATGCCGACCCCAAGATTTATGACCAGGTGACTGACTTAGAAGACATGGCCGTGAAGATGGAGTACTACCTAGAGGAGTACAACGTGGTGTCATCGTCTCCGATGTCGCTGGTGATGTTCCGTTACGCGCTGGACCACATCTCGCGCTGCGCCAGGGTGCTGCTGCAGGACAACGGGAACTTGCTCCTGGTCGGCGTGGGCGGCAGCGGCAGAAGCAGCGCCGTTAAGTTAGCCGCCAGTATCCTGGAGATGAACGTTATCCAAGTAACCTTCATACTTATACATATATTCATATTCCATACTTTTGGATTTTGTTTGTCAGCCAGCGCGCCCCTCGAGACATGA
Protein
MCIKRPLVRIKVVGHPGTTNITFEPTLDQMRVMIVKWFHSIISVNHQLPSLDTILYPGSSRPNPYLMAVYPDESYMQQVVGRSLHHFAANRPGPVSFLASYQPYHYILDGRAAQELQQFFAQEPPPYLKDFSARIYMYEELRDEILFLRRDIPLNMVMLDCAPVNDCMWDAVDGLRRHIVDHFIAVNRKWNRDICNVYEEMAARASESPETTAQLVELIGYIQDCRDCAMFDLREKARTTAEYVLFLMQHAHLHFEDVNLNTRVFLWPLDMDETIDLTLKTLNTKKTMAEDKLRSRKAIFEEQLKKHEKDLEVFRRFDPPLLNVDLLREVVGKVDEIFNNLMEDKHEADDIINEEQLLEQDVSVYYSLQTMLAGIEPFHKLWHTAYDFYEGYERWYHGPFLGLDAETISEDVEAWWKLLYKLGKQLFEYPGAKRIADMVRNKLEKFKVLLPVLCAICNKGMRDRHWARISELVGIEVIHDPETTLADMVEQGVHVFATQLEEIEQYASKEYALEKALTKMKDEWVGVKFEVVPYRDTGVGILTGLDDIQQQLDDHILKSQTMRGSPYVKAFEADMVSWEEKLISMQDILDQWLQCQATWMYLEPIFSSEDIMRQMPTEARNFRDVDKEWRTIMAATQKEPMVLPATDYPALLKKLKYNNCLLEDIQRGLNDYLEKKRLFFPRFFFLSNDELLEILSETKDPMRVQPHLKKCFEGIYTLEFNAAREIIGMASAEGEVVKLSSTIQPADAKGMVERWLQQLEHQMVVSLRDVAAEAIAAYSTAVREEWVLSWPGQIVQSGSCVQYTAAAIEAIQANSLPELVELSTKQITGLVFLVQGDLEPGNRITVEALIVIDVHGRSILEEMVSRRVSNTSDFNWISQLRYYARGDRMTCAMITTDVEYGFEYLGNTGRLVATPLTDRCFRTLMSALKLNLGGAPEGPAGTGKTETTKDLAKAVAKKCVVFNCSDGLDYKALGKFFKGLAQSGAWACFDEFNRIELEVLSVVAQQILSIQLAILRREKRFIFEGTEISLNPTCSVFITMNPGYAGRTELPDNLKVLFRTVAMMVPDYAMIGEITLYSNGFVNAGPLARKIVQAYKLCSEQLSSQNHYDYGMRAVKSVLLASGTLKKNYPEQEEARLVLRAIIDVNMPKFLSQDVPLFAGIYSDLFPGVEIPQPDRNELLSCINKELDKRNLQPTDWYLEKIIQIYEMMLVRHGFMIVGPPMGGKTQAYQSLADSLRALQLMKPPPRHKEFGAIYRIINPKAITMGQLYGCFDPASHEWSDGVLAIAFREYATSLTRDRKWILFDGPVDAVWIENMNTVLDDNKKLCLMSGEIIQMTNKMNLIFEAADLEFASPATVSRCGMIYMEPEQLGWRAFLSSYNTQLSKRLIPEQFDLIQELVEWLLPPVLDFLSQRCRHFVNVGDIHQFHSFTRLFTCLLEGEAQFSTVWLQCTFVFALVWGLCATINGESRKSFDVFFRKLLDGNNAAFPKPKSFKLTKNQLFQDKDTVFDYVYDKRNNGTWIPWMELEKELPLSPTAKTQDIIMSKVDRRRKGVFGPSMGKKCVLFVDDLSMPQKEQYGAQPPLELLREWIDHGHWYDLKEMVRQEVVDVLLVSAMLPPGGGSNLISSRLTRHMLLITLDSFEDNTLNKIFGTIMDWHLSKGFVESLMRQSKSVVSATMEVYKAATVQFLPTPSKCHYLFNLRDFARVIKGILLVPSTHMKDLNKLVVLWIHETYRVFYDRLVDDTDRQKLFEVVYKAVYGHYRVHMDQVMAELGYVPEGEKLANKHAANIFFGNYMEPDADPKIYDQVTDLEDMAVKMEYYLEEYNVVSSSPMSLVMFRYALDHISRCARVLLQDNGNLLLVGVGGSGRSSAVKLAASILEMNVIQVTFILIHIFIFHTFGFCLSASAPLET

Summary

Description
Force generating protein of respiratory cilia. Produces force towards the minus ends of microtubules. Dynein has ATPase activity; the force-producing power stroke is thought to occur on release of ADP. Involved in sperm motility; implicated in sperm flagellar assembly (By similarity).
Subunit
Consists of at least two heavy chains and a number of intermediate and light chains.
Similarity
Belongs to the dynein heavy chain family.
Keywords
Alternative splicing   ATP-binding   Cell projection   Cilium   Coiled coil   Complete proteome   Cytoplasm   Cytoskeleton   Dynein   Microtubule   Motor protein   Nucleotide-binding   Reference proteome   Polymorphism  
Feature
chain  Dynein heavy chain 3, axonemal
splice variant  In isoform 3.
sequence variant  In a colorectal cancer sample; somatic mutation.
EMBL
BABH01041432    BABH01041433    RSAL01000062    RVE49566.1    KQ460044    KPJ18330.1    + More
AGBW02014621    OWR41319.1    NWSH01000033    PCG80468.1    KQ459232    KPJ02561.1    AAZO01002344    DS235161    EEB12713.1    KQ414588    KOC70456.1    GL762073    EFZ22301.1    KQ977935    KYM98706.1    GL441452    EFN64781.1    KQ434823    KZC07229.1    KQ435800    KOX73298.1    KQ980713    KYN14257.1    GL446696    EFN87368.1    KQ976467    KYM84183.1    ADTU01007769    KQ981905    KYN33583.1    GL887532    EGI70852.1    ACPB03005807    KQ971362    EFA07910.2    LJIJ01000011    ODN06077.1    CM004483    OCT61613.1    AMGL01068744    AMGL01068745    AMGL01068746    AMGL01068747    AMGL01068748    AMGL01068749    AMGL01068750    AMGL01068751    AMGL01068752    AMGL01068753    JSUE03025852    JSUE03025853    JSUE03025854    JSUE03025855    AC122853    AC131702    AAGW02061422    AAGW02061423    AAGW02061424    AAGW02061425    AAGW02061426    AAEX03004469    AAEX03004470    AAEX03004471    RCHS01002303    RMX48216.1    JARO02003975    KPP69393.1    AGCU01087471    AGCU01087472    AGCU01087473    AGCU01087474    AGCU01087475    AGCU01087476    AGCU01087477    AGCU01087478    KB320811    ELW62513.1    AEMK02000017    CP026264    AWP21839.1    KL449279    KFV04374.1    Z83816    BC051401    AK053178    AAGJ04169662    AAGJ04169663    AAGJ04169664    AAGJ04169665    AHZZ02018471    JH172081    EHB13206.1    ADFV01197397    ADFV01197398    ADFV01197399    ADFV01197400    ADFV01197401    ADFV01197402    ADFV01197403    ADFV01197404    KL872115    KGL94539.1    AQIA01042306    AQIA01042307    AQIA01042308    AQIA01042309    AQIA01042310    AQIA01042311    NDHI03003625    PNJ14680.1    AACZ04055604    AC150904    NBAG03000076    PNI91682.1    CABD030099627    CABD030099628    CABD030099629    CABD030099630    CABD030099631    CABD030099632    CABD030099633    CABD030099634    CABD030099635    CABD030099636    AF494040    AK056509    CH471228    AJ132085    AJ132092    Z83805    U83574    BC019878    AL096732    AC002394    AJFE02038222    AJFE02038223    AJFE02038224    AJFE02038225    AJFE02038226    AJFE02038227    AJFE02038228    AJFE02038229    AJFE02038230    AJFE02038231    GEDC01031454    JAS05844.1    PZQS01000001    PVD37608.1    KE671586    ERE80054.1    KB202619    ESO89088.1    CVRI01000049    CRK99186.1    ERE80055.1    AAMC01007126    AAMC01007127    AAMC01007128    AAMC01007129    AAMC01007130    AAMC01007131    AAMC01007132    AAMC01007133    AQIB01118441    AQIB01118442    AQIB01118443    AQIB01118444    AQIB01118445    DS469720    EDO34727.1    KB631579    ERL84432.1    RJVU01075378    ROI16469.1    BX547934    FP245439    KL530192    KFO92540.1    NOWV01000032    RDD43934.1    AAPN01430329    AAPN01430330    AAPN01430331    AAPN01430332    AAPN01430333    AAPN01430334    AAPN01430335    AAPN01430336    AAPN01430337    AAPN01430338    APGK01058704    APGK01058705    APGK01058706    APGK01058707    KB741291    ENN70560.1    DS985242    EDV27935.1   
Proteomes
UP000005204    UP000283053    UP000053240    UP000007151    UP000218220    UP000053268    + More
UP000009046    UP000053825    UP000078542    UP000000311    UP000076502    UP000053105    UP000078492    UP000008237    UP000078540    UP000005205    UP000078541    UP000007755    UP000015103    UP000007266    UP000094527    UP000186698    UP000248480    UP000265140    UP000002356    UP000006718    UP000000589    UP000245320    UP000001811    UP000286640    UP000002254    UP000248483    UP000275408    UP000252040    UP000034805    UP000007267    UP000261660    UP000011518    UP000008225    UP000008227    UP000233220    UP000246464    UP000087266    UP000233200    UP000189704    UP000192224    UP000007110    UP000028761    UP000006813    UP000001073    UP000053858    UP000233100    UP000085678    UP000002277    UP000001519    UP000233160    UP000005640    UP000240080    UP000233120    UP000265300    UP000245119    UP000002280    UP000030759    UP000192223    UP000030746    UP000183832    UP000008143    UP000029965    UP000007646    UP000001593    UP000261360    UP000030742    UP000233060    UP000081671    UP000000437    UP000001645    UP000233180    UP000253843    UP000002279    UP000019118    UP000002358    UP000261640    UP000009022   
Pfam
PF12774   AAA_6        + More
PF08393   DHC_N2
PF17852   Dynein_AAA_lid
PF17857   AAA_lid_1
PF18199   Dynein_C
PF12777   MT
PF12780   AAA_8
PF12781   AAA_9
PF03028   Dynein_heavy
PF18198   AAA_lid_11
Interpro
IPR013602   Dynein_heavy_dom-2        + More
IPR026983   DHC_fam       
IPR041466   Dynein_AAA5_ext       
IPR003593   AAA+_ATPase       
IPR042228   Dynein_2_C       
IPR035699   AAA_6       
IPR041589   DNAH3_AAA_lid_1       
IPR042222   Dynein_2_N       
IPR027417   P-loop_NTPase       
IPR024743   Dynein_HC_stalk       
IPR024317   Dynein_heavy_chain_D4_dom       
IPR035706   AAA_9       
IPR041228   Dynein_C       
IPR041658   AAA_lid_11       
IPR004273   Dynein_heavy_D6_P-loop       
IPR042219   AAA_lid_11_sf       
IPR019098   Histone_chaperone_domain_CHZ       
SUPFAM
SSF52540   SSF52540       
Gene 3D
PDB
3VKG     E-value=5.82692e-160,     Score=1454

Ontologies

Topology

Subcellular location
  
Length:
1912
Number of predicted TMHs:
1
Exp number of AAs in TMHs:
22.4193
Exp number, first 60 AAs:
0.02068
Total prob of N-in:
0.00106
outside
1  -  1883
TMhelix
1884  -  1906
inside
1907  -  1912
 
 

Population Genetic Test Statistics

Pi
47.658567
Theta
5.028083
Tajima's D
-1.194741
CLR
32.474741
CSRT
0.0971951402429879
Interpretation
Uncertain
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