Silkworm Genome Informatics Database

Gene

KWMTBOMO10000

Pre Gene Modal

BGIBMGA014420

Annotation

hypothetical_protein_KGM_18550_[Danaus_plexippus]

Location

Bomo_Chr17(+):28836-36534 View in EpiBrowser

Location in the cell

Nuclear Reliability : 3.313

CDS

ATGCAAGGAGGGGATGCAGGGGATGCGGAGCGCAGGAGGCGCGGTACCGGGATCGCCAGAGCAGCCTCCAACTACTACCCTGAAGGTGAAGGGGAGGGAGGATGCAGCGAGTTCCCGCCGCTGATGCAGGCTCGATCGTGGACCCGCGGCGTGCCCTACAAGGAGAGCTCTCGGCACACTAAACCTGTTGACTCCATCGGTAACAGCTACTCGGCGGGGGCGCGGGGGCTGCGCGCGGCGAGCATGCCGCCCCGGCGACGGGAGCCGCCCGCGCTGTACGGGCCGCTCGGACCCGGCGGAGAGCTGCAGTTCCCGCCGCTCAAACCTTGGCCCGAGAGGGAGAGGGAACGCCTACAAGCCATCGAAAGGGAAAAGAAAAAACATAAACTACCGAAAGGACACGTCCTCCTCGAAGATCTGGTGTCTGGCGCATACGAAAGGAAGAAGGCTGCAGCTGCGGAAGCGAAGAGAAGAAGAATAGAAATGAGAAAAAAAGAAAAAGAGGAAGCTGAGAAAGCTGCTCGGGAGGCGCTGCAAAAGTATGTTCATCGTTCCCTGGTCGCCCTCCCGCGCGCGCGGGGCGGGGCGCGGGGCGGGGGGCGGGGGGCTGCATGCGTACCGGTGTGTTGCAGGCGCCTGGCCCGGCTGCAGCTCGAGCCGCCGCGGGACCCCGACCAACAGAAGGACGAGATGCTGAGAGTTACGGAAGAGGAGCAATATAGACCCCTGCATCCCGATCACTTGAAACGAATTCAGTATTATTTAAATGTATCCCTGTCCGGGCGACACATCCCGGAGTTCCCTCGCGAGCTGTACACCCGCGCCAGACGAAGAGTCGACGAACAAACCGCTGCCATCAAGAGACGACTCCTCTCCCTGACGTACCAGGCGTGTGTGCGGCAGACTGAGGCTGAAATTAACGAGTTTTTTGTAATGGCAATGAAGAGATGTCTCCTGTCGTACATACTGGAGGAGCCGGGAGAGCGCGAGCGGCTCGGCATCGCGTTCCTGCCGCCGCTGTGGCCGGCGCTGGTGGTGCGCGCGCCCGTGCCCTGGCACTGCGCTCTCGTGCGAGCCAAGCACGCCATGGCCTACCGCTTCTACGAGGGGAACCCCATCGTCATTGAACTCAAGAGGATATGGAATGAAAAGTACCAGAACATGTTGATCTGCAATATGAAGGATATGCAGACAGACGCACCCTTCCCCCAATATCCTGCGGAGCTGACGGAGCGGCTCAACAAGCTGTGCGCGGAGACCAGAGCCGAGCTGCTCGACAACTGGCTGATAGACGCGGCCGACACCATGATCAAGATGCGTCGTCACTGGGCCGTCTACGTGCCCAACAAGAAACGAGGATCGACCTTCCAAGTGGAGCAGTTCTTCAAGTCAGTTCCTCGCGTCATTAGCTCGGGCGTCGTTCATTAA

Protein

MQGGDAGDAERRRRGTGIARAASNYYPEGEGEGGCSEFPPLMQARSWTRGVPYKESSRHTKPVDSIGNSYSAGARGLRAASMPPRRREPPALYGPLGPGGELQFPPLKPWPERERERLQAIEREKKKHKLPKGHVLLEDLVSGAYERKKAAAAEAKRRRIEMRKKEKEEAEKAAREALQKYVHRSLVALPRARGGARGGGRGAACVPVCCRRLARLQLEPPRDPDQQKDEMLRVTEEEQYRPLHPDHLKRIQYYLNVSLSGRHIPEFPRELYTRARRRVDEQTAAIKRRLLSLTYQACVRQTEAEINEFFVMAMKRCLLSYILEEPGERERLGIAFLPPLWPALVVRAPVPWHCALVRAKHAMAYRFYEGNPIVIELKRIWNEKYQNMLICNMKDMQTDAPFPQYPAELTERLNKLCAETRAELLDNWLIDAADTMIKMRRHWAVYVPNKKRGSTFQVEQFFKSVPRVISSGVVH

Uniprot

H9JY02 A0A212EIK6 A0A2A4K998 A0A1B6DH83 A0A195CEQ5 A0A224XG38 + More
E2AP45

Pubmed

19121390 22118469 20798317

EMBL

BABH01041433 AGBW02014621 OWR41319.1 NWSH01000033 PCG80468.1 GEDC01012323 + More
JAS24975.1 KQ977935 KYM98706.1 GFTR01009006 JAW07420.1 GL441452 EFN64781.1

Proteomes

UP000005204 UP000007151 UP000218220 UP000078542 UP000000311

PRIDE

H9JY02

Pfam

PF17852   Dynein_AAA_lid        + More
PF18199   Dynein_C
PF17857   AAA_lid_1
PF12777   MT
PF03028   Dynein_heavy
PF12780   AAA_8
PF18198   AAA_lid_11
PF12781   AAA_9
PF08393   DHC_N2
PF12774   AAA_6

Interpro

IPR024743   Dynein_HC_stalk        + More
IPR024317   Dynein_heavy_chain_D4_dom
IPR027417   P-loop_NTPase
IPR042222   Dynein_2_N
IPR035706   AAA_9
IPR041589   DNAH3_AAA_lid_1
IPR035699   AAA_6
IPR041658   AAA_lid_11
IPR042228   Dynein_2_C
IPR041228   Dynein_C
IPR003593   AAA+_ATPase
IPR041466   Dynein_AAA5_ext
IPR013602   Dynein_heavy_dom-2
IPR004273   Dynein_heavy_D6_P-loop
IPR026983   DHC_fam
IPR042219   AAA_lid_11_sf
IPR019098   Histone_chaperone_domain_CHZ

SUPFAM

SSF52540 SSF52540

Gene 3D

1.10.8.720 1.20.140.100 3.20.180.20

ProteinModelPortal

H9JY02 A0A212EIK6 A0A2A4K998 A0A1B6DH83 A0A195CEQ5 A0A224XG38 + More
E2AP45

KEGG

101744900 K10408 dynein heavy chain, axonemal | (RefSeq) dynein heavy chain 3, axonemal

GO

GO:0003777 GO:0007018 GO:0005524 GO:0030286

PANTHER

PTHR10676

Length:

475

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.0702

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00177

outside

1 - 475

Pi

13.696167

Theta

14.107871

Tajima's D

-0.540512

CLR

191.589817

CSRT

0.231838408079596

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics