SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO09996  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA013806
Annotation
PREDICTED:_uncharacterized_protein_LOC105841662_[Bombyx_mori]
Location in the cell
Mitochondrial   Reliability : 1.47 Nuclear   Reliability : 2.118
 

Sequence

CDS
ATGTACCGTACACCCACGACTTCGGGCGCCTCCAAAAAGCCTACCACTCCCAGCCCTACCACAACCGCAGTGGCGCAGGGTGCGGCAAGGACGTTTATTAAAAGACCAGACATCAAAAGAAGATCACTCGACAATATGGACATTTTCAAAAAGCAGCAACAGAACTATGCTGCGCTGTCGAGTGAACAGCTCCTCCAGGAGATGATGAAGACTTTCGAGGATATACCCTCGAAAGTCCATGAGTACCCTCAGATGAGGAGGGACATAAAGCAGTTCCTGGAGGTGCAGTCAGACAAGGGCATACGTGCAATTTTCGAGCTCAGTAGGCGTATTGAGAGTCTCGAAGCAGGAGCCCCAAAGACAAGGACACCGACAAAAACCTCGTCGTCTGACGGCACAGATGTCATTCTAAATAAGCTGGGAGAGGTGGAAAAGGCATTGACTAAACGACTAAACGAGATGGAGCTGAGTCTAAAAACAGACATAATACAATTGAATGACGAAAATGACGGCCGGGGCTCCGACATGATCGACAAGATCATCGACAGGATCGACGAGACCAGAGCTGCCATGGACCAAACGACCGAGGCGGTCGAGAGTCGAACGCACGCTCTCGTCAAGGATCTGGTCGGTGGTCTTGCCGACGATGTCGTTGCAGCAAAACAAGAACTTACGGAGGTCGCAAAAGGACTGGTATGCGATATAAACTTAGCTCCAGTCTCTAAGTCATACGCCAGCGTCGCAGCAGCCAAACCCGTCCACCGTCCTGCACTTCATTCGATGGCAGTCACTCTCGAAGGTAGTCAGGAGACTGCTGACGAGGTGCTCGCCAGGGTGAAGAGGGCAGTCGACGCCAGAGGCACTGGACTTAAAATTAACAAGGTACGCAAGGCGAAAAACCAAACTATTATATTGGGTTGCGACACCGAGGAGGAAAGAAAGAAAGTCCAAGAGATAATAGAGAGTCGTGGGGATGGACTGGTAGTAGCGCCCATGAAGAACAAGAGCCCTCTCGTTGTCCTGAAGGATGTTTTCGTGGAAAGTGAAGACGACGATATGATTAAGGCACTCCACGTCCAAAACAAGAACATATTCATGGGCCTACCGGAAGAAGACATGCAAATGGAAATAAAATTTAAAAAACGAACCAGAAACCCAAAGACCGCGCACATCATCTTGCAAGTGAAGCCGAAAGTATGGCAGAGGATGACGGAAGCTGGAGCCCTCTATCTGGACCTTCAAAGGGTCAGAGTCGAGGACCAGTCTCCGCTCATCCAATGCACGAGGTGCCTCGCATTTGGACATGGTCGAAAATTTTGCACCGAGAGTGTGGACAGATGCAGTCACTGTGGAGGACCGCATCTGCGCGAGAAATGCGCAGACTTTATCGCAGGGACCGAACCGTGGTGCTGCAACTGCTCACACTCTGGGTTGCGGAAGGCTGACCATAACGCTTTTAGCGCCGAATGCCCGGTACGAAAAAAGTGGGACTACTTGGCTCGCGCAAATACCACATATGCATAA
Protein
MYRTPTTSGASKKPTTPSPTTTAVAQGAARTFIKRPDIKRRSLDNMDIFKKQQQNYAALSSEQLLQEMMKTFEDIPSKVHEYPQMRRDIKQFLEVQSDKGIRAIFELSRRIESLEAGAPKTRTPTKTSSSDGTDVILNKLGEVEKALTKRLNEMELSLKTDIIQLNDENDGRGSDMIDKIIDRIDETRAAMDQTTEAVESRTHALVKDLVGGLADDVVAAKQELTEVAKGLVCDINLAPVSKSYASVAAAKPVHRPALHSMAVTLEGSQETADEVLARVKRAVDARGTGLKINKVRKAKNQTIILGCDTEEERKKVQEIIESRGDGLVVAPMKNKSPLVVLKDVFVESEDDDMIKALHVQNKNIFMGLPEEDMQMEIKFKKRTRNPKTAHIILQVKPKVWQRMTEAGALYLDLQRVRVEDQSPLIQCTRCLAFGHGRKFCTESVDRCSHCGGPHLREKCADFIAGTEPWCCNCSHSGLRKADHNAFSAECPVRKKWDYLARANTTYA

Summary

Pfam
PF00098   zf-CCHC
Interpro
IPR036875   Znf_CCHC_sf        + More
IPR001878   Znf_CCHC       
SUPFAM
SSF57756   SSF57756       

Ontologies

Topology

Length:
507
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00057
Exp number, first 60 AAs:
0.00057
Total prob of N-in:
0.00578
outside
1  -  507
 
 

Population Genetic Test Statistics

Pi
292.775223
Theta
150.50706
Tajima's D
2.93667
CLR
0.403158
CSRT
0.975951202439878
Interpretation
Uncertain

Multiple alignment of Orthologues

 
 

Gene Tree

 
 
Copyright@ 2018-2023    Any Comments and suggestions mail to:zhuzl@cqu.edu.cn   渝ICP备19006517号

渝公网安备 50010602502065号