Silkworm Genome Informatics Database

Gene

KWMTBOMO09991

Pre Gene Modal

BGIBMGA013209

Annotation

PREDICTED:_LOW_QUALITY_PROTEIN:_uncharacterized_protein_LOC101735587_[Bombyx_mori]

Location

Bomo_Chr16(-):14199054-14199924 View in EpiBrowser

Location in the cell

Nuclear Reliability : 1.33

CDS

ATGTCTAAGCAGCATATGTATCACTGCTGTGGCACCTGCGAAGTAAAGGTCATGTGCGGAGAACATATTGTCTTGAAACAGTTGAATAACACTGGTCGTCTGTATCTAGAGCCAGGTTGCCTTATAAAGGGATCAGATTATACACTTCATATACCTAAAACAAACAACAATAAGCTGGAGATTCAGTCTAACATTTACGTTCCAATAATAGATCCGATAAATAATATCATAAACAGCTCTCTTCTCAACACTGAGAACCTGAATGTCAGCGAGTCTAAAGATTTGCAGAACGCTCTCCAGAAACTACACGTGCGTATTGAAGATCTAGAAAACTCCCCGCCAGTATTGGAGACTTCATTAACATCTCACGATACTCATCAATATGTGATAACATACATCATCGTCATCGTCATCGTGCTGGCTACCGGCGTGCTACTCTGGCGACGACGACGGTTGAGTGCGAACCGGGCGATCATCTCTGACGATCGAGCTTCAACAGTATAG

Protein

MSKQHMYHCCGTCEVKVMCGEHIVLKQLNNTGRLYLEPGCLIKGSDYTLHIPKTNNNKLEIQSNIYVPIIDPINNIINSSLLNTENLNVSESKDLQNALQKLHVRIEDLENSPPVLETSLTSHDTHQYVITYIIVIVIVLATGVLLWRRRRLSANRAIISDDRASTV

Uniprot

H9JUJ6 H9J8Z4 A0A2W1BSY4 A0A2H1W5E1 A0A0L7KSZ2 A0A0L7L980 + More
A0A0L7L4W7 A0A2A4K6T9 A0A2A4JSD5 A0A2H1VPI7 A0A2A4JE19

Pubmed

19121390 28756777 26227816

EMBL

BABH01022546 BABH01004836 KZ149978 PZC75870.1 ODYU01006135 SOQ47724.1 + More
JTDY01005976 KOB66403.1 JTDY01002190 KOB71914.1 JTDY01002935 KOB70460.1 NWSH01000070 PCG79985.1 NWSH01000770 PCG74312.1 ODYU01003679 SOQ42751.1 NWSH01001818 PCG70026.1

Proteomes

UP000005204 UP000037510 UP000218220

PRIDE

H9JUJ6 H9J8Z4

Pfam

PF12259   Baculo_F        + More
PF17921   Integrase_H2C2
PF00230   MIP
PF05585   DUF1758
PF03564   DUF1759
PF05380   Peptidase_A17
PF00665   rve
PF18701   DUF5641
PF00096   zf-C2H2

Interpro

IPR022048   Envelope_fusion-like        + More
IPR001584   Integrase_cat-core
IPR000425   MIP
IPR008042   Retrotrans_Pao
IPR012337   RNaseH-like_sf
IPR040676   DUF5641
IPR023271   Aquaporin-like
IPR008737   Peptidase_asp_put
IPR041588   Integrase_H2C2
IPR036397   RNaseH_sf
IPR005312   DUF1759
IPR036236   Znf_C2H2_sf
IPR013087   Znf_C2H2_type

SUPFAM

SSF53098   SSF53098        + More
SSF81338   SSF81338
SSF57667   SSF57667

Gene 3D

1.20.1080.10 3.30.420.10

ProteinModelPortal

H9JUJ6 H9J8Z4 A0A2W1BSY4 A0A2H1W5E1 A0A0L7KSZ2 A0A0L7L980 + More
A0A0L7L4W7 A0A2A4K6T9 A0A2A4JSD5 A0A2H1VPI7 A0A2A4JE19

KEGG

101735587 no KO assigned | (RefSeq) uncharacterized LOC101735587

GO

GO:0016021 GO:0003676 GO:0015267 GO:0015074

Length:

167

Number of predicted TMHs:

1

Exp number of AAs in TMHs:

21.10264

Exp number, first 60 AAs:

0.03013

Total prob of N-in:

0.16327

outside

1 - 127

TMhelix

128 - 147

inside

148 - 167

Pi

156.002966

Theta

155.478865

Tajima's D

0.081055

CLR

0.012033

CSRT

0.394130293485326

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics

Multiple alignment of Orthologues

Gene Tree