Silkworm Genome Informatics Database

Gene

KWMTBOMO09984

Pre Gene Modal

BGIBMGA013215

Annotation

PREDICTED:_glucose_dehydrogenase_[FAD?_quinone]_[Bombyx_mori]

Location

Bomo_Chr16(-):14116282-14118811 View in EpiBrowser

Location in the cell

Mitochondrial Reliability : 0.973

CDS

ATGATTGTGATAATGTCTGGACTGGGAGCTCGTACGTTTATTGAATGCAATCAAAATAAATCATATTTAAGACTTGGAGTTCTCATCGATACCATAGTGTATGGCGACAATAAAAATCCAGCGACTGTCTCTGTAATGTCGGAATATAGGCTGTACGCTTTCAATAAAACTCCTTCTAGCTACCTGACCCATCCAGACGACGTCAAAACCCTAGTGGAAGGCATTAAGTTCGCCATCAAACTGTCGGAAACGACGGCTCTGAAGCGATACGGACTGAAGCTGGACAAGACCCCAGTCAAGGGATGCGAGAAACTAAAGTTTGGATGTGATGCATACTGGGAGTGTGCAGTCAGGATGCAGACGGGTCCTGAAAACCACCAAGCCGGCTCCTGCAGGATGGGGCCGCGGGGCGATCCCGGCGCAGTGGTCGACAACCTACTCCAGGTGCAAGGACTGGACCGGCTTCGCGTGGCGGACGCGAGCGTGATGCCGAGTGTGACCTCGGGCAACACCAACGCGCCGGTCATCATGATCGGGGAGCGCGCCGCCGACTTCATCAAGGAGAGGTGGCTCGGCCTCGCGCAGGCTTCATTCCCAGCGGCGGAGCACGGCGGAGTCTCCAACGTGTTAGCGTCCAGCGACGGAGAGCGACCGACCGTGCGCCCGAAATGGGACTCATAG

Protein

MIVIMSGLGARTFIECNQNKSYLRLGVLIDTIVYGDNKNPATVSVMSEYRLYAFNKTPSSYLTHPDDVKTLVEGIKFAIKLSETTALKRYGLKLDKTPVKGCEKLKFGCDAYWECAVRMQTGPENHQAGSCRMGPRGDPGAVVDNLLQVQGLDRLRVADASVMPSVTSGNTNAPVIMIGERAADFIKERWLGLAQASFPAAEHGGVSNVLASSDGERPTVRPKWDS

Cofactor

FAD

Similarity

Belongs to the GMC oxidoreductase family.

Uniprot

H9JUK2 A0A2H1WCL9 A0A291P102 A0A291P0R7 A0A212F246 I4DLH2 + More
A0A0N1IP29 A0A2J7Q748 A0A2J7Q741 A0A1B6LQB0 A0A0L7QV07

Pubmed

19121390 28986331 22118469 22651552 26354079

EMBL

BABH01022555 ODYU01007445 SOQ50224.1 MF687604 ATJ44530.1 MF687548 + More
ATJ44474.1 AGBW02010783 OWR47815.1 AK402140 BAM18762.1 KQ460643 KPJ13316.1 NEVH01017447 PNF24405.1 PNF24406.1 GEBQ01014066 JAT25911.1 KQ414731 KOC62384.1

Proteomes

UP000005204 UP000007151 UP000053240 UP000235965 UP000053825

PRIDE

H9JUK2

Pfam

PF00732 GMC_oxred_N + More
PF05199 GMC_oxred_C

Interpro

IPR007867   GMC_OxRtase_C        + More
IPR012132   GMC_OxRdtase
IPR000172   GMC_OxRdtase_N
IPR036188   FAD/NAD-bd_sf

SUPFAM

SSF51905 SSF51905

Gene 3D

3.50.50.60

ProteinModelPortal

H9JUK2 A0A2H1WCL9 A0A291P102 A0A291P0R7 A0A212F246 I4DLH2 + More
A0A0N1IP29 A0A2J7Q748 A0A2J7Q741 A0A1B6LQB0 A0A0L7QV07

PDB

5NCC E-value=1.82634e-15, Score=198

KEGG

101736123 K00115 glucose 1-dehydrogenase (FAD, quinone) [EC:1.1.5.9] | (RefSeq) glucose dehydrogenase [FAD, qu

GO

GO:0050660 GO:0016614 GO:0016021 GO:0016491 GO:0004843 GO:0006511 GO:0008233 GO:0005634 GO:0004672 GO:0030677 GO:0016155 GO:0003824 GO:0055114

Length:

226

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00713

Exp number, first 60 AAs:

0.0039

Total prob of N-in:

0.01660

outside

1 - 226

Pi

171.911595

Theta

152.194465

Tajima's D

0.335203

CLR

0.143161

CSRT

0.463126843657817

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics