Silkworm Genome Informatics Database

Gene

KWMTBOMO09979

Annotation

hypothetical_protein_KGM_08685_[Danaus_plexippus]

Location

Bomo_Chr16(-):14015613-14035741 View in EpiBrowser

Location in the cell

Nuclear Reliability : 3.579

CDS

ATGTCTAATGTTAGCTATGATATGGATACATCGGGAGGTCTTATGCCGTTAATAAAGGCCCTAATTAAGCCTCCGGATGAGGATTTGAACGTCCCGAAGCCTAAGAAGCCTCAGCATCCATATTACAAGAGGCCTGGAAAGGGTCATAACCACGATTCGTGCGACGCTTGCGGTGAAGGCGGAGATCTTATCTGTTGCGACCGATGTCCAGCAAGCTTCCATCTTGGTTGCTATGATCCACCTCTGGACGAAACTGACATCCCAGCTGGCTTGTGGTTGTGTCGTGAGTGCCATGCAGCTGATGAGAACAAACCGTCAAGTTCACGTAGCAGTCGTGCTCAGTCTCCTGCTGACAAATCTGACGGGGAGAAGAAGACTAGATCCCTGCGAAATAATCGGACGAATTCCAAAAAGAAAAGTAAAGAGGACGACGATGAGGTCAAGAAGGAGACAGAGAGGCAGGCTGAAGCGGAGAAAGAGCTATCTCCGATGGAAGTGCTGGTTAAAGCTGCCAAGATAATGAACCCAAGGCAGTTTGAACTGCCCCGAGAATTAAGAATACCGTGTATATTTCCCGGTACTGAAAAAGAAGGCGCGGGCGAGGCGGGGGCGGGGGCGGGGGCGGGGGCGGCGGGCGGCGAGTGCTTCGTGTGCGGCGCATCCTGCCGCGTCGCGCCGCTGCTGCGCTGCGACTACTGCCCGCTGCTGTACCACCAGGACTGCCTGGAGCCGCCGCTGACTGCGCTGCCCACGGGGCGCTGGATGTGTCCGAACCACGTTGAACAATATATCGACTGGAAGCTGGTGAACTCCATCTCGGCGACGGAGCGGGTGGCGCTGTGGGACCGGTTCGCGGGGCCCGTGGACCAGCACGCCATCAAGATAGACTTCCTGCGCCGCGCGAGGAACCCCAACCCCAGGTTCAGAATAAAGATCCCGGCCCACGTCCGCGGGCGCGTGCGCGTGCCGCCCATGGTCCGCAGCCACTACCGGCGCCCCGCCCCCCTGCTGCCGGCGCGGAGGGAGCACGTGCGCTGTCGGAACGTGTTAAAGAATCTGGGATTATCGAGTGTACTGGAGAGTGAGGGCGAAGAGTGTCGGAAGCACACCATCTGTATGAACATGGAGTGCCCGTCCTACAGCGGCGCCGCCCCCTGCCCCGCCGCCGCGCCGCACTCCCCCGCGCCCCGCCCCGCGCAGGCGAGTGCGAGCCCGGGCTCGTCGGACTACTCGGACTCGGACCTGGAGTACTACACGGCGTCAGTGAAGAGACGGAAGGCCACCGGCGCCGAGGACAAGGGGTTCGGCCGGCGAGCCCGCGCCGACCGCGTGCAGCTGCGCGCCGACGAGCACGTGGAGCAGCTGCTGGCGCTCGTCGACGAGCAGCTCAAGAAGCTCGACGAGAGACTCGTGAAGCTGCTCGCCTGGCAGCGGCTGCAGCAGGTGCTGGCGGGCGAGGCGTGCGCGGGCTGGTGGCGCGACGTGCCGCTCTCCCGGGCCGTGGCGCGCGCGCTGGCCAGGCACCTCACGCGGGGCGCGCTCGCCGCGCACGGGTTCCGTCACGTGTCGCTGCCGTCGGAGCTGCTGTCCCGGGCGGACCGCGAGCGCATCGCCCGCAGCGTGTGGGGCGCCGCGCCCGCCCCCCGCCCGCCGCCCCGCGCCGCCCCCCGCGCCACCCCCTCCCCGCCGCCGCCGCGTGCGCGCGCCCTGTCCGACGCGTGCGTGCGGGCCACACTCTGTGCTATCAACTCTATGGACAGCGCGGGGCCGGGCGACTCCCTGGGCCGGCCGGTGCCCATGCGGCTGTCGTCGCTGACCGTGGGCTCGGACAGCGGCTGTGACGTCACACTCGACCCCGCCCTTTGCCGGTGCGTCTCCCGGAACCACGCCGTTATATTCATGGACGAGGTGAGCGGACACTTCGAGCTGATCAACTACTCCGAGTTCGGCAGTCGCGTTAACGGCGTGCTGTACACGTGCGACCCCCTCGCCGCCGCCCCCGCCCCCACCCCCGCGGCGGACGACGCTCTGCCGCGCGCGCTTCGAGATGTCGTCAAAGAGAAGGACTCCCCGCTCGACAGGATAAAAGGTGACATCACGGAGCCCACGTCGTGGTGCTCGGCGTGCTCGTGCGGCGCGGGCGCGGGGGCGGGGGCGGGTGCGGGCGCGGGCGCGGCGGCGGGCGCGTGGGAGGGCTCGGCGCTGGTGCCGCACGGCGCGCTGCTGCAGTTCGGGTGTCGCCTCTACGTGTTCAGCATCACCGACGCCAAGCCCTTCCCCTACGAACAGATCATCACCGACCCGGCGCTGTAG

Protein

MSNVSYDMDTSGGLMPLIKALIKPPDEDLNVPKPKKPQHPYYKRPGKGHNHDSCDACGEGGDLICCDRCPASFHLGCYDPPLDETDIPAGLWLCRECHAADENKPSSSRSSRAQSPADKSDGEKKTRSLRNNRTNSKKKSKEDDDEVKKETERQAEAEKELSPMEVLVKAAKIMNPRQFELPRELRIPCIFPGTEKEGAGEAGAGAGAGAAGGECFVCGASCRVAPLLRCDYCPLLYHQDCLEPPLTALPTGRWMCPNHVEQYIDWKLVNSISATERVALWDRFAGPVDQHAIKIDFLRRARNPNPRFRIKIPAHVRGRVRVPPMVRSHYRRPAPLLPARREHVRCRNVLKNLGLSSVLESEGEECRKHTICMNMECPSYSGAAPCPAAAPHSPAPRPAQASASPGSSDYSDSDLEYYTASVKRRKATGAEDKGFGRRARADRVQLRADEHVEQLLALVDEQLKKLDERLVKLLAWQRLQQVLAGEACAGWWRDVPLSRAVARALARHLTRGALAAHGFRHVSLPSELLSRADRERIARSVWGAAPAPRPPPRAAPRATPSPPPPRARALSDACVRATLCAINSMDSAGPGDSLGRPVPMRLSSLTVGSDSGCDVTLDPALCRCVSRNHAVIFMDEVSGHFELINYSEFGSRVNGVLYTCDPLAAAPAPTPAADDALPRALRDVVKEKDSPLDRIKGDITEPTSWCSACSCGAGAGAGAGAGAGAAAGAWEGSALVPHGALLQFGCRLYVFSITDAKPFPYEQIITDPAL

Uniprot

A0A212F2A3 A0A194PT89 A0A0N0PC36

Pubmed

22118469 26354079

EMBL

AGBW02010783 OWR47853.1 KQ459595 KPI95979.1 KQ460655 KPJ12927.1 + More

Proteomes

UP000007151 UP000053268 UP000053240

Pfam

PF16737 PHF12_MRG_bd + More
PF00628 PHD

Interpro

IPR038098   PHF12_MRG-bd_sf        + More
IPR042163   PHF12
IPR000253   FHA_dom
IPR011011   Znf_FYVE_PHD
IPR031966   PHF12_MRG-bd
IPR008984   SMAD_FHA_dom_sf
IPR019787   Znf_PHD-finger
IPR001965   Znf_PHD
IPR013083   Znf_RING/FYVE/PHD
IPR019786   Zinc_finger_PHD-type_CS

SUPFAM

SSF57903 SSF57903 + More
SSF49879 SSF49879

Gene 3D

1.10.10.1860 3.30.40.10

CDD

cd00060 FHA

ProteinModelPortal

A0A212F2A3 A0A194PT89 A0A0N0PC36

PDB

2KE1 E-value=8.48295e-09, Score=147

KEGG

101736786 no KO assigned | (RefSeq) PHD finger protein 12

GO

GO:0046872 GO:0005515 GO:0008270 GO:0043565 GO:0006508 GO:0008233 GO:0005634 GO:0004672 GO:0030677 GO:0016155 GO:0003824

PANTHER

PTHR46309

Length:

770

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.02718

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00021

outside

1 - 770

Pi

224.213442

Theta

165.595282

Tajima's D

1.320382

CLR

0.337323

CSRT

0.739763011849408

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics