Gene

KWMTBOMO09978

Pre Gene Modal

BGIBMGA013200

Annotation

PREDICTED:_GPN-loop_GTPase_3_[Papilio_machaon]

Location

Bomo_Chr16(+):14007702-14011661      View in EpiBrowser

Full name

GPN-loop GTPase 3      

Location in the cell

Cytoplasmic   Reliability : 3.242

CDS

ATGCGTTACGCTCAGTTAATAGTGGGACCAGCCGGAAGTGGAAAGTCAACATACTGCTCTACAATAGTGAAACATGCAATGGACTCCAAACGCATTGTAGATGTAGTAAACTTGGACCCAGCAGCTGAACACTTTGACTATGAGCCACTCGTAGACATCAGAGAACTAATACACCTTGATGATGCTATGGAAGATGAGGAATTGCAATTTGGACCAAATGGTGGTCTAGTGTTTTGTATAGAGACCCTCTTAGAGAATTCTGACTGGTTAGAGGAGCAACTTGGAGATGTTGATGATGATTACATTTTATTTGACTGTCCAGGACAGATTGAGTTGTACACCCATCTGCCGGTTATGAGAAGATTGGTTGATTTGCTTCAGAATTGGAACTTTAGGATATGTGTAGTGTTCTTAGTGGACTCGCAGTTCATGATTGATGGTGCAAAATTTTTATCAGGTACAATGGCTGCATTAAGTGTAATGGTGAATCTGGAACTACCACACGTCAATGTTCTCACTAAAATGGATCTACTCAGTAAAACTGCTAGAAAACAAATAGACAATTACTTAGATCCCGATCCACACGTATTGTTATCAGATATGAGAAATGCACATTCGAAATGGCATGAAAAGTATGCCAAACTGACTGAAGCAATTGGAGAAGTGGTGGAAAATTTCAGTTTAGTTAGATTCTATCCATTGAACATACGAGATGAAGAGAGCATAGAAAATATTATGCTGACTGTAGACAATATTATACAATATGGCGAAGATGCAGATGTTAAAATAAAAGATTTTGACGAATTGGAACCGGAACATAATGAAATTGGCGATGATTAA

Protein

MRYAQLIVGPAGSGKSTYCSTIVKHAMDSKRIVDVVNLDPAAEHFDYEPLVDIRELIHLDDAMEDEELQFGPNGGLVFCIETLLENSDWLEEQLGDVDDDYILFDCPGQIELYTHLPVMRRLVDLLQNWNFRICVVFLVDSQFMIDGAKFLSGTMAALSVMVNLELPHVNVLTKMDLLSKTARKQIDNYLDPDPHVLLSDMRNAHSKWHEKYAKLTEAIGEVVENFSLVRFYPLNIRDEESIENIMLTVDNIIQYGEDADVKIKDFDELEPEHNEIGDD

Description

Small GTPase required for proper nuclear import of RNA polymerase II and III (RNAPII and RNAPIII). May act at an RNAP assembly step prior to nuclear import.

Subunit

Binds to RNA polymerase II (RNAPII).

Similarity

Belongs to the GPN-loop GTPase family.

Uniprot

A0A2H1V8F0   A0A2A4JBQ7   A0A0N1PGF4   S4NM22   A0A212F2A4   A0A2A3EHX7   + More
A0A2J7R8B4   A0A310S546   A0A088ANJ5   A0A154P0H4   A0A0M8ZXM9   A0A0A9WS43   A0A1B6EIU5   A0A1B6D4Q7   A0A1B6HXW5   A0A1W4X8K1   D2A5B5   A0A034VTY4   W8C782   A0A2R7W6Z2   A0A1B6LN76   A0A0K8V899   A0A0A1WNK5   A0A195C5K4   A0A224XHK3   A0A151X4J2   A0A0V0GEC0   A0A1Y1LEG5   A0A1I8NP89   A0A069DQS7   A0A0T6B7J0   A0A1L8DI81   A0A2J7R8B7   A0A1B0GJX5   A0A195ERG8   A0A1A9ZAC2   A0A158NDZ7   A0A0L7R186   A0A023F8K0   A0A195D821   A0A0P4VPR4   R4G389   A0A195BRC0   F4X1T7   A0A182QWY6   A0A336M688   B4PS05   T1PKW3   A0A182HK47   A0A182TDU6   A0A182UV20   B3LYD6   Q7PX09   J3JUL7   A0A182JT90   A0A182XP05   B4KDR2   A0A084W0J1   A0A182PR86   J9JXV3   A0A182RFZ3   A0A1W4VZH6   E0VET9   E2AX64   B4QZ11   B4NKM7   B3P2T9   A0A1J1IR25   A0A067R5N3   E2BFE8   A0A182VW69   B4LZE0   Q294R9   B4GMP6   A0A182YND3   Q9VI70   A0A182T064   A0A182J682   B4I4P7   B4JHX4   A0A232EX23   A0A1Q3F6Q1   A0A0J7KLD9   W5J5E0   A0A2M4AVE2   Q16QZ2   A0A2S2QJ22   B0X1P9   A0A182FS94   A0A182MB89   A0A182L8B8   A0A2H8TG22   N6TBL2   A0A2M4BVB5   A0A1W4WXR0   A0A1B0D6B9   A0A1A9VF13   A0A182NQY5   A0A2R5LIN7   A0A131Y2I2  

Pubmed

26354079    23622113    22118469    25401762    26823975    18362917    + More
19820115    25348373    24495485    25830018    28004739    26334808    21347285    25474469    27129103    21719571    17994087    17550304    25315136    12364791    14747013    17210077    22516182    24438588    20566863    20798317    24845553    15632085    25244985    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    28648823    20920257    23761445    17510324    20966253    23537049   

EMBL

ODYU01001198    SOQ37081.1    NWSH01002246    PCG68833.1    KQ460655    KPJ12928.1    + More
GAIX01012789    JAA79771.1    AGBW02010783    OWR47854.1    KZ288254    PBC30776.1    NEVH01006723    PNF37071.1    KQ772169    OAD52477.1    KQ434789    KZC05351.1    KQ435833    KOX71669.1    GBHO01035954    GBRD01010239    GDHC01019309    JAG07650.1    JAG55585.1    JAP99319.1    GECZ01031919    JAS37850.1    GEDC01016609    JAS20689.1    GECU01028203    JAS79503.1    KQ971345    EFA05100.1    GAKP01013033    JAC45919.1    GAMC01008136    JAB98419.1    KK854402    PTY15494.1    GEBQ01015023    JAT24954.1    GDHF01017311    JAI35003.1    GBXI01014294    JAC99997.1    KQ978251    KYM95910.1    GFTR01004461    JAW11965.1    KQ982548    KYQ55307.1    GECL01000439    JAP05685.1    GEZM01057984    JAV72042.1    GBGD01002491    JAC86398.1    LJIG01009459    KRT83037.1    GFDF01007941    JAV06143.1    PNF37069.1    AJWK01022434    KQ981993    KYN30818.1    ADTU01013080    KQ414668    KOC64556.1    GBBI01001050    JAC17662.1    KQ981153    KYN09002.1    GDKW01002113    JAI54482.1    ACPB03000860    GAHY01001896    JAA75614.1    KQ976424    KYM88504.1    GL888551    EGI59594.1    AXCN02001485    UFQT01000446    SSX24399.1    CM000160    EDW96405.1    KA648593    AFP63222.1    APCN01000816    CH902617    EDV41799.1    AAAB01008987    EAA01032.3    BT126932    AEE61894.1    CH933806    EDW14909.1    ATLV01019122    KE525262    KFB43735.1    ABLF02039333    DS235098    EEB11895.1    GL443520    EFN61947.1    CM000364    EDX11951.1    CH964272    EDW85199.1    CH954181    EDV48111.1    CVRI01000057    CRL02194.1    KK852685    KDR18495.1    GL448009    EFN85608.1    CH940650    EDW68175.2    CM000070    EAL28895.2    CH479185    EDW38120.1    AE014297    AY061137    AAF54055.2    AAL28685.1    CH480821    EDW55190.1    CH916369    EDV92882.1    NNAY01001793    OXU22904.1    GFDL01011800    JAV23245.1    LBMM01005973    KMQ91051.1    ADMH02002066    ETN59682.1    GGFK01011419    MBW44740.1    CH477727    EAT36830.1    GGMS01008490    MBY77693.1    DS232266    EDS38777.1    AXCM01000964    GFXV01001206    MBW13011.1    APGK01036710    KB740941    KB632225    ENN77659.1    ERL90284.1    GGFJ01007885    MBW57026.1    AJVK01012024    GGLE01005230    MBY09356.1    GEFM01003111    JAP72685.1   

Proteomes

UP000218220    UP000053240    UP000007151    UP000242457    UP000235965    UP000005203    + More
UP000076502    UP000053105    UP000192223    UP000007266    UP000078542    UP000075809    UP000095300    UP000092461    UP000078541    UP000092445    UP000005205    UP000053825    UP000078492    UP000015103    UP000078540    UP000007755    UP000075886    UP000002282    UP000095301    UP000075840    UP000075902    UP000075903    UP000007801    UP000007062    UP000075881    UP000076407    UP000009192    UP000030765    UP000075885    UP000007819    UP000075900    UP000192221    UP000009046    UP000000311    UP000000304    UP000007798    UP000008711    UP000183832    UP000027135    UP000008237    UP000075920    UP000008792    UP000001819    UP000008744    UP000076408    UP000000803    UP000075901    UP000075880    UP000001292    UP000001070    UP000215335    UP000036403    UP000000673    UP000008820    UP000002320    UP000069272    UP000075883    UP000075882    UP000019118    UP000030742    UP000092462    UP000078200    UP000075884   

PRIDE

Q9VI70   

Pfam

PF03029   ATP_bind_1        + More
PF04855   SNF5

Interpro

IPR027417   P-loop_NTPase        + More
IPR030228   Gpn3       
IPR004130   Gpn       
IPR006939   SNF5       

SUPFAM

SSF52540   SSF52540       

ProteinModelPortal

A0A2H1V8F0   A0A2A4JBQ7   A0A0N1PGF4   S4NM22   A0A212F2A4   A0A2A3EHX7   + More
A0A2J7R8B4   A0A310S546   A0A088ANJ5   A0A154P0H4   A0A0M8ZXM9   A0A0A9WS43   A0A1B6EIU5   A0A1B6D4Q7   A0A1B6HXW5   A0A1W4X8K1   D2A5B5   A0A034VTY4   W8C782   A0A2R7W6Z2   A0A1B6LN76   A0A0K8V899   A0A0A1WNK5   A0A195C5K4   A0A224XHK3   A0A151X4J2   A0A0V0GEC0   A0A1Y1LEG5   A0A1I8NP89   A0A069DQS7   A0A0T6B7J0   A0A1L8DI81   A0A2J7R8B7   A0A1B0GJX5   A0A195ERG8   A0A1A9ZAC2   A0A158NDZ7   A0A0L7R186   A0A023F8K0   A0A195D821   A0A0P4VPR4   R4G389   A0A195BRC0   F4X1T7   A0A182QWY6   A0A336M688   B4PS05   T1PKW3   A0A182HK47   A0A182TDU6   A0A182UV20   B3LYD6   Q7PX09   J3JUL7   A0A182JT90   A0A182XP05   B4KDR2   A0A084W0J1   A0A182PR86   J9JXV3   A0A182RFZ3   A0A1W4VZH6   E0VET9   E2AX64   B4QZ11   B4NKM7   B3P2T9   A0A1J1IR25   A0A067R5N3   E2BFE8   A0A182VW69   B4LZE0   Q294R9   B4GMP6   A0A182YND3   Q9VI70   A0A182T064   A0A182J682   B4I4P7   B4JHX4   A0A232EX23   A0A1Q3F6Q1   A0A0J7KLD9   W5J5E0   A0A2M4AVE2   Q16QZ2   A0A2S2QJ22   B0X1P9   A0A182FS94   A0A182MB89   A0A182L8B8   A0A2H8TG22   N6TBL2   A0A2M4BVB5   A0A1W4WXR0   A0A1B0D6B9   A0A1A9VF13   A0A182NQY5   A0A2R5LIN7   A0A131Y2I2  

PDB

2OXR     E-value=2.09714e-13,     Score=182

KEGG

101740625    K06883 uncharacterized protein | (RefSeq) GPN-loop GTPase 3

GO

GO:0005525   GO:0016787   GO:0003924   GO:0000228   GO:0006338  

PANTHER

PTHR21231   PTHR21231:SF7   PTHR10019  

Length:

279

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.60645

Exp number, first 60 AAs:

0.00319

Total prob of N-in:

0.03479

outside

1  -  279

 

 

Pi

306.55833

Theta

149.647908

Tajima's D

2.830423

CLR

0.038387

CSRT

0.969701514924254

Interpretation

Uncertain