Gene
KWMTBOMO09975
Annotation
PREDICTED:_facilitated_trehalose_transporter_Tret1_isoform_X2_[Bombyx_mori]
Location in the cell
PlasmaMembrane Reliability : 4.964
Sequence
CDS
ATGGCTGATTTGAGTGATGAAACTAACACTTATACACGAAAGCCGCTGCTAAGACAGCTCCTCATCAGTACTGGACCATGGAACTGCTATTTTATGTTCGGCCTCTGCGTTGGATCACCGACCGTGATGATTCCGCAGATACGAAAAGACATCAATTCCACTATTGTCATTAATGAGGATATGGCTTCGTGGATACCGGCCATCCACAGCTACAGCGCTCTCCCGTGGGTTTTCATATTGCCATCGTTGATCAGGATCTCCGGCCGCAAGAAGTCCTACATCTTAGTTTGCATCTTCGCCTGCATCGGCTTCCTCACACACTACTGTAGTAAAACTATCATTCACGTAATCATAAGCGAAGTGTTAAAAGGAGTACTTACAGCTTCACATTTCACAGTGTCCGTAGTCATAGTAACTGAGTACACATCTCCGAGATACAGAGGGGTGTTCTTAACACTGAAATCTGCTTCTTTCTTTTGGGGTATTCTAGTAGCTAATGCAATAGGAACTTTTTTCCATTGGCGAAACATAGCGGTGCTTGGAATAATCTGTTCAGCATACAATTTATTCACCGTTGTAGTATGGCCAGAATCTCCTCTTTGGTTAGCTGATAAAGGAAGATGCCACGACTGTATATCAGCACACAGATGGTTGAAGGGTAGCGACCTTATTTCAGAGAAAGAACTCAAAAGACTGACAAGCTTATATAGCGTTTATATATCTATTACATTGTTAACTGGATTTACGATGGCCATTTCATCTGGCCCTATGATATTGTCTCTAGCGATTTCGGGAGAATTGATTTCGTTAAGATTTCGTAGCTTTTCACTGTGCGTTACAGTTTTAATATTCAAATCGTTGAATGGTACAGTTATGAAATTTTCACCGTTTACGTTTCGTTATTTTGGACTGCACGGCGTGTTCTTTATTTACGGCTCATTCTCGTTAACTTTCTTATTTTTATTGTACCTATATCTACCAGAAACTAAGGACAGATCGCTGCAAGAAATAGCCGATTCGATGAATGAAAAAAAACGAAATGTAGCCGAAGAGACAAAAATGATTACTAATGTACTTAATGATGAAAAAATAATTACGTAG
Protein
MADLSDETNTYTRKPLLRQLLISTGPWNCYFMFGLCVGSPTVMIPQIRKDINSTIVINEDMASWIPAIHSYSALPWVFILPSLIRISGRKKSYILVCIFACIGFLTHYCSKTIIHVIISEVLKGVLTASHFTVSVVIVTEYTSPRYRGVFLTLKSASFFWGILVANAIGTFFHWRNIAVLGIICSAYNLFTVVVWPESPLWLADKGRCHDCISAHRWLKGSDLISEKELKRLTSLYSVYISITLLTGFTMAISSGPMILSLAISGELISLRFRSFSLCVTVLIFKSLNGTVMKFSPFTFRYFGLHGVFFIYGSFSLTFLFLLYLYLPETKDRSLQEIADSMNEKKRNVAEETKMITNVLNDEKIIT
Summary
Uniprot
Proteomes
Pfam
PF00083 Sugar_tr
SUPFAM
SSF103473
SSF103473
CDD
ProteinModelPortal
PDB
4LDS
E-value=0.000400219,
Score=103
Ontologies
GO
Topology
Length:
366
Number of predicted TMHs:
8
Exp number of AAs in TMHs:
173.77436
Exp number, first 60 AAs:
22.46533
Total prob of N-in:
0.91629
POSSIBLE N-term signal
sequence
inside
1 - 19
TMhelix
20 - 42
outside
43 - 61
TMhelix
62 - 84
inside
85 - 95
TMhelix
96 - 118
outside
119 - 147
TMhelix
148 - 170
inside
171 - 176
TMhelix
177 - 196
outside
197 - 239
TMhelix
240 - 262
inside
263 - 274
TMhelix
275 - 292
outside
293 - 301
TMhelix
302 - 324
inside
325 - 366
Population Genetic Test Statistics
Pi
220.562378
Theta
185.911761
Tajima's D
0.337434
CLR
301.005649
CSRT
0.468526573671316
Interpretation
Uncertain
