Gene

KWMTBOMO09973

Pre Gene Modal

BGIBMGA013220

Annotation

PREDICTED:_estradiol_17-beta-dehydrogenase_8-like_isoform_X1_[Bombyx_mori]

Location

Bomo_Chr16(-):13245051-13245896      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 2.435

CDS

ATGAGTTTTTCTAGTAAAATCGTTTTGATTACAGGAGCCAGTAGAGGAATAGGCGCAGCAACAGCGATAATGTTCGCTAAAGAAGGGGCTGATGTAATAATTGTTGGAAGAAATGAAGAAAAACTCAAAGAAGTCGAAGTGGAATGTTCTAAATTTGGTAAGAAACCCCTTGTTATTACGGCGGATTTGGCGAAAGATGAGCAAGTTAAAGGTATAGTCAATAAAACTATAGATGCATTCGGAAAACTGGATATATTAATTAACAATGCTGGCATACTAAAGGAAAATGACATTAAGTCAGAAGGCTTCATAGAGACTTTCGACGAAGTGATGAACACAAACCTAAGAGCTTCTGTATTGATAACCAACGTGGCCATACCACACCTGATCAAAACAAGAGGCAATATCATTAATGTTTCTAGTGTCGCTGCAACTTCAACATCAGTTGTTAATTCTGTTACGTACAAAGTATCTAAAGCCGCCCTCAACCATTTCACTCGCTGCATAGCCTTAGAACTTGCTCCTCATGGCATCCGAGCTAACACAGTGAGCCCTGGCCCTGTGGAAACAGATATTTTCGAAACAGCTGGGATTCCAGAAGCACTACAAAATTATGCAGGACAACTTCCCCTTAAGAAAGTCGGCAAGAAAGAAGAAGTGGCAGATTTGATCTTGTTTTTGGCCAGCGAGAAAGCGCAAAGTATAACCGGAGCGAATTACGTTATAGATAATGGGTGGCTGTTAAACTAA

Protein

MSFSSKIVLITGASRGIGAATAIMFAKEGADVIIVGRNEEKLKEVEVECSKFGKKPLVITADLAKDEQVKGIVNKTIDAFGKLDILINNAGILKENDIKSEGFIETFDEVMNTNLRASVLITNVAIPHLIKTRGNIINVSSVAATSTSVVNSVTYKVSKAALNHFTRCIALELAPHGIRANTVSPGPVETDIFETAGIPEALQNYAGQLPLKKVGKKEEVADLILFLASEKAQSITGANYVIDNGWLLN

Similarity

Belongs to the short-chain dehydrogenases/reductases (SDR) family.

Uniprot

H9JUK7   H9JUK8   A0A0N0PC39   A0A0N1IFH9   H9JUQ7   A0A2H1VC89   + More
H9JUE7   H6AGY1   A0A2A4JIX4   H9JUQ8   A0A194PR87   A0A2A4JHN9   A0A2A4J612   A0A0N1PFW5   A0A0L7KLX4   A0A194PXT8   A0A0L7LIU8   Q9NBB5   I4DS66   A0A0N0PB24   H9JHN5   A0A194PID7   A0A0N0PAS3   A0A0L7KSS2   A0A0N0PET2   A0A194PT74   A0A2H1V3T7   A0A2H1X3T6   A0A194PJG5   A0A0N1IGV7   A0A2A4JIH1   A0A0L7KZ86   A0A0L7LH86   A0A194PIN0   A0A2A4JHX2   A0A2A4ITT1   A0A2H1VHE2   A0A2A4JIE3   A0A194PKC3   A0A2A4JH23   A0A2H1WUW2   A0A194PPC7   A0A2H1WS78   A0A2H1WTS2   A0A212EJ84   A0A212EJ88   A0A2A4J134   A0A2H1VYS0   A0A0L7LK01   A0A2A4J0E8   A0A194Q286   A0A0L7KN57   H9JUI0   A0A0N1IDX2   A0A2H1VAH5   A0A0L7KSR6   A0A2A4JIM8   D2SNW1   A0A2H1VBR9   A0A2H1WMX1   A0A2A4IZG3   A0A2A4IZU2   A0A212EP45   H9JUH9   H9JKZ2   A0A2W1BUV9   A0A0N1IHB9   A0A212F231   A0A2H1VFS6   A0A2A4K5A7   A0A0L7K599   I4DQC6   A0A0N1IIA2   A0A2H1WFW5   A0A194Q138   A0A0L7KZH2   A0A212ETR6   A0A2W1BSW8   A0A2W1BZ77   A0A2H1WPX2   A0A1Q3G5G6   A0A0L7KMQ4   A0A2H1X3K0   I4DJE1   A0A0L7KPN2   H9JG62   H9JUE8   A0A0N1PJN4   A0A1Q3G5L3   A0A1Q3G5H6   A0A194PHJ7   A0A0N0PDP5   F4WG13   A0A2A4K610   I4DPW2   A0A194RRD7   A0A1L8DJ56   A0A2H1VC15   A0A212F276   A0A194PUH3  

Pubmed

19121390    26354079    26227816    10861234    22651552    22118469    + More
20074338    28756777    21719571   

EMBL

BABH01022634    BABH01022635    BABH01022636    KQ460655    KPJ12937.1    KPJ12939.1    + More
BABH01022835    ODYU01001522    SOQ37854.1    JF433973    AEM17060.1    NWSH01001398    PCG71373.1    KQ459595    KPI95966.1    NWSH01001353    PCG71567.1    NWSH01003146    PCG66863.1    KQ461178    KPJ07786.1    JTDY01009080    KOB64125.1    KPI95965.1    JTDY01000942    KOB75350.1    AF255341    AAF70499.1    AK405443    BAM20756.1    KPJ07785.1    BABH01012981    KQ459602    KPI93176.1    KPJ07784.1    JTDY01006084    KOB66312.1    KQ459717    KPJ20326.1    KPI95964.1    ODYU01000551    SOQ35503.1    ODYU01013212    SOQ59906.1    KPI93178.1    KPJ12938.1    PCG71374.1    JTDY01004206    KOB68460.1    JTDY01001151    KOB74729.1    KPI93177.1    PCG71376.1    NWSH01006959    PCG63175.1    ODYU01002398    SOQ39832.1    PCG71569.1    KPI93179.1    PCG71375.1    ODYU01011234    SOQ56848.1    KQ459596    KPI95296.1    ODYU01010604    SOQ55826.1    ODYU01010994    SOQ56451.1    AGBW02014512    OWR41546.1    OWR41545.1    NWSH01004416    PCG65150.1    ODYU01005275    SOQ45968.1    JTDY01000816    KOB75772.1    PCG65148.1    KQ459579    KPI99448.1    JTDY01008777    KOB64404.1    KQ460650    KPJ13113.1    SOQ37853.1    KOB66313.1    PCG71568.1    EZ407245    ACX53802.1    SOQ37852.1    ODYU01009744    SOQ54378.1    PCG65151.1    PCG65149.1    AGBW02013539    OWR43254.1    BABH01011332    KZ149910    PZC78151.1    KQ460571    KPJ13957.1    AGBW02010784    OWR47781.1    ODYU01002131    SOQ39232.1    NWSH01000134    PCG79206.1    JTDY01010313    KOB58251.1    AK404043    BAM20116.1    KQ460317    KPJ16010.1    ODYU01008068    SOQ51354.1    KQ459580    KPI99297.1    JTDY01004127    KOB68555.1    AGBW02012537    OWR44869.1    PZC78149.1    PZC78150.1    ODYU01010177    SOQ55120.1    GEYN01000194    JAV44795.1    KOB64405.1    ODYU01012735    SOQ59194.1    AK401409    BAM18031.1    JTDY01007623    KOB65070.1    BABH01002061    BABH01022833    BABH01022834    LADJ01004337    KPJ20878.1    GEYN01000185    JAV44804.1    GEYN01000184    JAV44805.1    KQ459604    KPI92523.1    KQ460254    KPJ16339.1    GL888128    EGI66780.1    NWSH01000090    PCG79695.1    AK403809    BAM19952.1    KQ459765    KPJ20037.1    GFDF01007687    JAV06397.1    ODYU01001753    SOQ38389.1    AGBW02010783    OWR47824.1    KQ459591    KPI96972.1   

Proteomes

UP000005204    UP000053240    UP000218220    UP000053268    UP000037510    UP000007151    + More
UP000007755   

PRIDE

H9JUK7    H9JUK8    H9JUQ7    H9JUE7    H6AGY1    H9JUQ8    + More
H9JHN5    H9JUI0    H9JUH9    H9JKZ2    H9JG62    H9JUE8   

Pfam

PF00106   adh_short        + More
PF00292   PAX

Interpro

IPR002347   SDR_fam        + More
IPR036291   NAD(P)-bd_dom_sf       
IPR020904   Sc_DH/Rdtase_CS       
IPR036388   WH-like_DNA-bd_sf       
IPR009057   Homeobox-like_sf       
IPR001523   Paired_dom       

SUPFAM

SSF51735   SSF51735        + More
SSF46689   SSF46689       

Gene 3D

1.10.10.10    

ProteinModelPortal

H9JUK7   H9JUK8   A0A0N0PC39   A0A0N1IFH9   H9JUQ7   A0A2H1VC89   + More
H9JUE7   H6AGY1   A0A2A4JIX4   H9JUQ8   A0A194PR87   A0A2A4JHN9   A0A2A4J612   A0A0N1PFW5   A0A0L7KLX4   A0A194PXT8   A0A0L7LIU8   Q9NBB5   I4DS66   A0A0N0PB24   H9JHN5   A0A194PID7   A0A0N0PAS3   A0A0L7KSS2   A0A0N0PET2   A0A194PT74   A0A2H1V3T7   A0A2H1X3T6   A0A194PJG5   A0A0N1IGV7   A0A2A4JIH1   A0A0L7KZ86   A0A0L7LH86   A0A194PIN0   A0A2A4JHX2   A0A2A4ITT1   A0A2H1VHE2   A0A2A4JIE3   A0A194PKC3   A0A2A4JH23   A0A2H1WUW2   A0A194PPC7   A0A2H1WS78   A0A2H1WTS2   A0A212EJ84   A0A212EJ88   A0A2A4J134   A0A2H1VYS0   A0A0L7LK01   A0A2A4J0E8   A0A194Q286   A0A0L7KN57   H9JUI0   A0A0N1IDX2   A0A2H1VAH5   A0A0L7KSR6   A0A2A4JIM8   D2SNW1   A0A2H1VBR9   A0A2H1WMX1   A0A2A4IZG3   A0A2A4IZU2   A0A212EP45   H9JUH9   H9JKZ2   A0A2W1BUV9   A0A0N1IHB9   A0A212F231   A0A2H1VFS6   A0A2A4K5A7   A0A0L7K599   I4DQC6   A0A0N1IIA2   A0A2H1WFW5   A0A194Q138   A0A0L7KZH2   A0A212ETR6   A0A2W1BSW8   A0A2W1BZ77   A0A2H1WPX2   A0A1Q3G5G6   A0A0L7KMQ4   A0A2H1X3K0   I4DJE1   A0A0L7KPN2   H9JG62   H9JUE8   A0A0N1PJN4   A0A1Q3G5L3   A0A1Q3G5H6   A0A194PHJ7   A0A0N0PDP5   F4WG13   A0A2A4K610   I4DPW2   A0A194RRD7   A0A1L8DJ56   A0A2H1VC15   A0A212F276   A0A194PUH3  

PDB

1XHL     E-value=7.02364e-37,     Score=383

KEGG

101741138    no KO assigned | (RefSeq) estradiol 17-beta-dehydrogenase 8-like

GO

GO:0016021   GO:0016491   GO:0005634   GO:0007275   GO:0003677   GO:0006355  

Subcellular location

Nucleus  

Length:

249

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

1.71076

Exp number, first 60 AAs:

1.67843

Total prob of N-in:

0.09952

outside

1  -  249

 

 

Pi

210.090473

Theta

185.036447

Tajima's D

0.440662

CLR

0.071351

CSRT

0.494475276236188

Interpretation

Uncertain