Gene

KWMTBOMO09972

Pre Gene Modal

BGIBMGA013221

Annotation

PREDICTED:_estradiol_17-beta-dehydrogenase_8-like_isoform_X1_[Bombyx_mori]

Location

Bomo_Chr16(-):13241242-13242306      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 2.581

CDS

ATGAGCTTCTACAGTAAAGTGGTATTAGTCACCGGAGCCAGTAGAGGAATAGGAGCAGCAACAGCGATACTGTTCGCTAAAGAAGGGGCTGATGTAGTAATTGTTGGAAGAAATGAAGAAAAACTCAAAGAAGTCGAAGAGCAGTGTTCTAAATTTGGCAAGAAACCCCTTATTATTACGGCAGATTTGGCGAAAGATGATCAAGCTAAAGGTATAGTCAATAAAACTATAGATGCACTTGGAAAACTGGATATATTAATTAACAATGCTGGCATATTGAAGAAAGATGACATTAAGTCAGAAGGCTTCGTAGAGACTTTCGACGAAGTGATGAACACAAACCTAAGAGCTTCTGTATTGATAACCAACGTGGCCATACCGCACCTGATCAAAACAAGAGGCAATATCATTAATGTTTCAAGTGTAGCTGCAGATTGCACATCAATTACAAATTTCGTGAGTTACAGAGTATCTAAAGCCGCCCTCAACCATTTCACTCGCTGCATAGCTTTAGAACTTGCTCCTCATGGCGTCCGAGCTAACACAGTGAGCCCTGGCCCTGTGGAAACAGATATTTTCGAAACAGCTGGAATCCCAGAAGCACTACAAAATTATTCTAGACAACTTCTCCTTAAGAAAGTCGGCAAGAAAGAAGAAGTGGCAGATTTGATCTTGTTTTTGGCCAGCGAGAAAGCGCAAAGTATAACCGGAGCGAATTACGTTATAGATAATGGGTGGCTGTTAAACTAA

Protein

MSFYSKVVLVTGASRGIGAATAILFAKEGADVVIVGRNEEKLKEVEEQCSKFGKKPLIITADLAKDDQAKGIVNKTIDALGKLDILINNAGILKKDDIKSEGFVETFDEVMNTNLRASVLITNVAIPHLIKTRGNIINVSSVAADCTSITNFVSYRVSKAALNHFTRCIALELAPHGVRANTVSPGPVETDIFETAGIPEALQNYSRQLLLKKVGKKEEVADLILFLASEKAQSITGANYVIDNGWLLN

Similarity

Belongs to the short-chain dehydrogenases/reductases (SDR) family.

Uniprot

H9JUK8   H9JUK7   A0A2H1VC89   A0A0N1IFH9   A0A0N0PC39   A0A2A4JHN9   + More
A0A0N1PFW5   H9JUQ7   I4DS66   H9JUE7   A0A0N0PB24   A0A194PR87   H9JUQ8   H6AGY1   A0A2A4JIX4   A0A194PID7   A0A0L7LIU8   A0A0L7KSS2   A0A2A4J612   A0A194PT74   Q9NBB5   A0A0N0PAS3   A0A194PJG5   H9JHN5   A0A194PXT8   A0A0L7KLX4   A0A0N1IGV7   A0A194PIN0   A0A2A4JIH1   A0A2A4JIE3   A0A2H1X3T6   A0A194PKC3   A0A2A4ITT1   A0A0L7KN57   A0A2A4J0E8   A0A2H1V3T7   A0A2A4IZU2   A0A2H1VHE2   A0A2A4J134   A0A2A4JH23   A0A2H1WMX1   A0A0N0PET2   A0A0L7LH86   A0A212F231   A0A212EJ88   A0A2A4JHX2   A0A212EJ84   A0A2H1VAH5   A0A2A4JIM8   A0A2H1WTS2   A0A2H1WUW2   A0A0L7KZ86   A0A0L7KSR6   H9JUI0   A0A2H1VBR9   A0A212EP45   A0A2H1WS78   D2SNW1   A0A2A4IZG3   A0A0L7LK01   A0A194PPC7   A0A2H1VYS0   A0A194Q286   A0A212ETR6   A0A0N1IDX2   I4DQC6   A0A0N1IIA2   A0A2W1BUV9   A0A2W1BSW8   A0A2H1WFW5   A0A2W1BZ77   A0A2H1WPX2   A0A0N1IHB9   A0A2A4K5A7   H9JUH9   H9JKZ2   A0A194Q138   I4DJE1   A0A2H1X3K0   A0A1Q3G5G6   H9JG62   A0A2H1VFS6   A0A0L7K599   A0A0L7KPN2   F4WG13   A0A0L7KMQ4   A0A1L8DJ56   A0A0L7KZH2   F4WG15   H9JUE8   A0A0N0PDP5   A0A2A4K610   F4WG14   A0A212F276   A0A0N1PJN4   A0A194PHJ7   A0A034W5D1   A0A158NTG1   A0A1Q3G5L3   A0A0K8U557  

Pubmed

19121390    26354079    22651552    26227816    10861234    22118469    + More
20074338    28756777    21719571    25348373    21347285   

EMBL

BABH01022634    BABH01022635    BABH01022636    ODYU01001522    SOQ37854.1    KQ460655    + More
KPJ12939.1    KPJ12937.1    NWSH01001353    PCG71567.1    KQ461178    KPJ07786.1    BABH01022835    AK405443    BAM20756.1    KPJ07785.1    KQ459595    KPI95966.1    JF433973    AEM17060.1    NWSH01001398    PCG71373.1    KQ459602    KPI93176.1    JTDY01000942    KOB75350.1    JTDY01006084    KOB66312.1    NWSH01003146    PCG66863.1    KPI95964.1    AF255341    AAF70499.1    KPJ07784.1    KPI93178.1    BABH01012981    KPI95965.1    JTDY01009080    KOB64125.1    KPJ12938.1    KPI93177.1    PCG71374.1    PCG71569.1    ODYU01013212    SOQ59906.1    KPI93179.1    NWSH01006959    PCG63175.1    JTDY01008777    KOB64404.1    NWSH01004416    PCG65148.1    ODYU01000551    SOQ35503.1    PCG65149.1    ODYU01002398    SOQ39832.1    PCG65150.1    PCG71375.1    ODYU01009744    SOQ54378.1    KQ459717    KPJ20326.1    JTDY01001151    KOB74729.1    AGBW02010784    OWR47781.1    AGBW02014512    OWR41545.1    PCG71376.1    OWR41546.1    SOQ37853.1    PCG71568.1    ODYU01010994    SOQ56451.1    ODYU01011234    SOQ56848.1    JTDY01004206    KOB68460.1    KOB66313.1    SOQ37852.1    AGBW02013539    OWR43254.1    ODYU01010604    SOQ55826.1    EZ407245    ACX53802.1    PCG65151.1    JTDY01000816    KOB75772.1    KQ459596    KPI95296.1    ODYU01005275    SOQ45968.1    KQ459579    KPI99448.1    AGBW02012537    OWR44869.1    KQ460650    KPJ13113.1    AK404043    BAM20116.1    KQ460317    KPJ16010.1    KZ149910    PZC78151.1    PZC78149.1    ODYU01008068    SOQ51354.1    PZC78150.1    ODYU01010177    SOQ55120.1    KQ460571    KPJ13957.1    NWSH01000134    PCG79206.1    BABH01011332    KQ459580    KPI99297.1    AK401409    BAM18031.1    ODYU01012735    SOQ59194.1    GEYN01000194    JAV44795.1    BABH01002061    ODYU01002131    SOQ39232.1    JTDY01010313    KOB58251.1    JTDY01007623    KOB65070.1    GL888128    EGI66780.1    KOB64405.1    GFDF01007687    JAV06397.1    JTDY01004127    KOB68555.1    EGI66782.1    BABH01022833    BABH01022834    KQ460254    KPJ16339.1    NWSH01000090    PCG79695.1    EGI66781.1    AGBW02010783    OWR47824.1    LADJ01004337    KPJ20878.1    KQ459604    KPI92523.1    GAKP01009969    JAC48983.1    ADTU01025891    GEYN01000185    JAV44804.1    GDHF01030532    JAI21782.1   

Proteomes

UP000005204    UP000053240    UP000218220    UP000053268    UP000037510    UP000007151    + More
UP000007755    UP000005205   

PRIDE

H9JUK8    H9JUK7    H9JUQ7    H9JUE7    H9JUQ8    H6AGY1    + More
H9JHN5    H9JUI0    H9JUH9    H9JKZ2    H9JG62    H9JUE8   

Pfam

PF00106   adh_short        + More
PF00292   PAX

Interpro

IPR002347   SDR_fam        + More
IPR036291   NAD(P)-bd_dom_sf       
IPR020904   Sc_DH/Rdtase_CS       
IPR036388   WH-like_DNA-bd_sf       
IPR009057   Homeobox-like_sf       
IPR001523   Paired_dom       

SUPFAM

SSF51735   SSF51735        + More
SSF46689   SSF46689       

Gene 3D

1.10.10.10    

ProteinModelPortal

H9JUK8   H9JUK7   A0A2H1VC89   A0A0N1IFH9   A0A0N0PC39   A0A2A4JHN9   + More
A0A0N1PFW5   H9JUQ7   I4DS66   H9JUE7   A0A0N0PB24   A0A194PR87   H9JUQ8   H6AGY1   A0A2A4JIX4   A0A194PID7   A0A0L7LIU8   A0A0L7KSS2   A0A2A4J612   A0A194PT74   Q9NBB5   A0A0N0PAS3   A0A194PJG5   H9JHN5   A0A194PXT8   A0A0L7KLX4   A0A0N1IGV7   A0A194PIN0   A0A2A4JIH1   A0A2A4JIE3   A0A2H1X3T6   A0A194PKC3   A0A2A4ITT1   A0A0L7KN57   A0A2A4J0E8   A0A2H1V3T7   A0A2A4IZU2   A0A2H1VHE2   A0A2A4J134   A0A2A4JH23   A0A2H1WMX1   A0A0N0PET2   A0A0L7LH86   A0A212F231   A0A212EJ88   A0A2A4JHX2   A0A212EJ84   A0A2H1VAH5   A0A2A4JIM8   A0A2H1WTS2   A0A2H1WUW2   A0A0L7KZ86   A0A0L7KSR6   H9JUI0   A0A2H1VBR9   A0A212EP45   A0A2H1WS78   D2SNW1   A0A2A4IZG3   A0A0L7LK01   A0A194PPC7   A0A2H1VYS0   A0A194Q286   A0A212ETR6   A0A0N1IDX2   I4DQC6   A0A0N1IIA2   A0A2W1BUV9   A0A2W1BSW8   A0A2H1WFW5   A0A2W1BZ77   A0A2H1WPX2   A0A0N1IHB9   A0A2A4K5A7   H9JUH9   H9JKZ2   A0A194Q138   I4DJE1   A0A2H1X3K0   A0A1Q3G5G6   H9JG62   A0A2H1VFS6   A0A0L7K599   A0A0L7KPN2   F4WG13   A0A0L7KMQ4   A0A1L8DJ56   A0A0L7KZH2   F4WG15   H9JUE8   A0A0N0PDP5   A0A2A4K610   F4WG14   A0A212F276   A0A0N1PJN4   A0A194PHJ7   A0A034W5D1   A0A158NTG1   A0A1Q3G5L3   A0A0K8U557  

PDB

1SPX     E-value=2.0595e-38,     Score=397

KEGG

101737475    no KO assigned | (RefSeq) 17-beta-hydroxysteroid dehydrogenase 14-like

GO

GO:0016021   GO:0016491   GO:0005634   GO:0007275   GO:0003677   GO:0006355  

Subcellular location

Nucleus  

Length:

249

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

2.03449

Exp number, first 60 AAs:

2.0073

Total prob of N-in:

0.12193

outside

1  -  249

 

 

Pi

200.227162

Theta

157.97256

Tajima's D

0.841364

CLR

1.233945

CSRT

0.620518974051297

Interpretation

Uncertain