Gene

KWMTBOMO09971

Pre Gene Modal

BGIBMGA013193

Annotation

3-dehydroecdysone_3alpha-reductase_[Operophtera_brumata]

Location

Bomo_Chr16(+):13234887-13235840      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 2

CDS

ATGAGCTACGTAGGTAAAGTGGTGTTGGTTACTGGAGGCAGCGCTGGAATAGGTGCTGAAATAGCTGTACATTTCGCTAGAGAAGGCGCCGACGTGGCTATAGTTGGGAGAAATGCTGAAAATCTTCATAAAGTTGCAGCCCGATGCGCGAAAGTAGGCAAACTAGCTTTCGTAATAAAAGCAGATCTTTCACAGGATGAAGACGTGAGATTTATTGTGAAGAAGACCGTGGAACATTGCGACCGATTGGATATCCTTGTTAATAACGCAGCGATACTGAAATCGTCATCCATATTTACTGAGGACTTAATGGAAGCAATTGATGATATATTCAAGGTGAATCTACGTGCAGTTATACAACTTACTCAATTGGCTGTACCACACCTGACAAAGACCAAAGGAAACATAATCAACATATCAAGCATATTGGCTACATCTACGCTATCATGTCCACAGTTTTTACCATACAGCGTAATGAAGGCTGGTTTAGAGCACTTTACCAGATTTTCAGCATTAGAACTTGCCCCATCCGGGATAAGAGTAAACGCCGTATGTCCCGGACCGGTGAAAACGGAGATTTTGAACAACGCGGGAATCGAGCGACCCTGTGAGAAATGGGAGAAACTAAGTCCCTTGAAAAGGATCGCACAACCTGAAGATGTAGCAGAAGTTGTTTTGTTCCTAGCGAATGCTAAAAGCGTTACCGGTTCCTATTATGTTATAGATAATGGACTTAAGATCAGCTTTTAA

Protein

MSYVGKVVLVTGGSAGIGAEIAVHFAREGADVAIVGRNAENLHKVAARCAKVGKLAFVIKADLSQDEDVRFIVKKTVEHCDRLDILVNNAAILKSSSIFTEDLMEAIDDIFKVNLRAVIQLTQLAVPHLTKTKGNIINISSILATSTLSCPQFLPYSVMKAGLEHFTRFSALELAPSGIRVNAVCPGPVKTEILNNAGIERPCEKWEKLSPLKRIAQPEDVAEVVLFLANAKSVTGSYYVIDNGLKISF

Similarity

Belongs to the short-chain dehydrogenases/reductases (SDR) family.

Uniprot

H9JUI0   A0A0L7LIU8   A0A2H1X3T6   A0A2H1VBR9   H9JUE7   A0A2A4IZG3   + More
H9JUQ7   A0A2A4J612   H6AGY1   H9JUQ8   A0A2A4JIX4   A0A0L7KSS2   H9JUK7   A0A2A4JHN9   A0A2H1VC89   A0A0L7KLX4   A0A2H1WUW2   H9JHN5   I4DS66   A0A2A4ITT1   A0A0N0PC39   A0A2H1WS78   A0A2A4JH23   A0A2H1VHE2   A0A2A4J0E8   A0A194PR87   A0A0N0PAS3   A0A2A4J134   Q9NBB5   A0A0L7KN57   H9JUK8   A0A2A4IZU2   A0A0N0PB24   A0A2A4JIE3   A0A2A4JHX2   H9JUH9   A0A2A4JIH1   A0A0L7LH86   A0A194PJG5   A0A0N1IFH9   A0A2H1WMX1   A0A194PID7   A0A0L7KSR6   A0A212EJ88   A0A0N1PFW5   A0A0L7LK01   A0A0L7KZ86   A0A194PKC3   A0A212EJ84   A0A0N1IGV7   A0A2H1V3T7   A0A194PT74   A0A194PIN0   A0A2W1BUV9   A0A212EP45   A0A2H1WTS2   A0A2W1BSW8   A0A194PXT8   A0A212F231   A0A194PPC7   A0A2H1VYS0   A0A0N0PET2   D2SNW1   A0A1Q3G5G6   A0A2H1WFW5   A0A2W1BZ77   A0A0L7KMQ4   A0A2A4JIM8   A0A0N1IIA2   W4XCM2   A0A2H1VAH5   A0A0N1IHB9   A0A194Q138   A0A212ETR6   F4WG14   A0A158NTG0   A0A2H1WPX2   F4WG13   A0A194Q286   A0A0L7KZH2   A0A0N1IDX2   A0A158NTG1   A0A2W1BZM6   A0A1Q3G5H6   A0A151JWN0   I4DQC6   I4DJE1   A0A2H1X3K0   F4WG12   A0A158NTI2   A0A1B6H0Z8   A0A151XBN1   H9JKZ2   A0A1B6GXM3   A0A1S3D915   A0A2A4JK27   W4XCM1   H2ZEY1   A0A1B6GU46   A0A1B6JEH2  

Pubmed

19121390    26227816    22651552    26354079    10861234    22118469    + More
28756777    20074338    21719571    21347285   

EMBL

BABH01022636    JTDY01000942    KOB75350.1    ODYU01013212    SOQ59906.1    ODYU01001522    + More
SOQ37852.1    BABH01022835    NWSH01004416    PCG65151.1    NWSH01003146    PCG66863.1    JF433973    AEM17060.1    NWSH01001398    PCG71373.1    JTDY01006084    KOB66312.1    BABH01022634    NWSH01001353    PCG71567.1    SOQ37854.1    JTDY01009080    KOB64125.1    ODYU01011234    SOQ56848.1    BABH01012981    AK405443    BAM20756.1    NWSH01006959    PCG63175.1    KQ460655    KPJ12937.1    ODYU01010604    SOQ55826.1    PCG71375.1    ODYU01002398    SOQ39832.1    PCG65148.1    KQ459595    KPI95966.1    KQ461178    KPJ07784.1    PCG65150.1    AF255341    AAF70499.1    JTDY01008777    KOB64404.1    BABH01022635    PCG65149.1    KPJ07785.1    PCG71569.1    PCG71376.1    PCG71374.1    JTDY01001151    KOB74729.1    KQ459602    KPI93178.1    KPJ12939.1    ODYU01009744    SOQ54378.1    KPI93176.1    KOB66313.1    AGBW02014512    OWR41545.1    KPJ07786.1    JTDY01000816    KOB75772.1    JTDY01004206    KOB68460.1    KPI93179.1    OWR41546.1    KPJ12938.1    ODYU01000551    SOQ35503.1    KPI95964.1    KPI93177.1    KZ149910    PZC78151.1    AGBW02013539    OWR43254.1    ODYU01010994    SOQ56451.1    PZC78149.1    KPI95965.1    AGBW02010784    OWR47781.1    KQ459596    KPI95296.1    ODYU01005275    SOQ45968.1    KQ459717    KPJ20326.1    EZ407245    ACX53802.1    GEYN01000194    JAV44795.1    ODYU01008068    SOQ51354.1    PZC78150.1    KOB64405.1    PCG71568.1    KQ460317    KPJ16010.1    AAGJ04108155    SOQ37853.1    KQ460571    KPJ13957.1    KQ459580    KPI99297.1    AGBW02012537    OWR44869.1    GL888128    EGI66781.1    ADTU01025890    ODYU01010177    SOQ55120.1    EGI66780.1    KQ459579    KPI99448.1    JTDY01004127    KOB68555.1    KQ460650    KPJ13113.1    ADTU01025891    KZ149894    PZC78895.1    GEYN01000184    JAV44805.1    KQ981639    KYN38689.1    AK404043    BAM20116.1    AK401409    BAM18031.1    ODYU01012735    SOQ59194.1    EGI66779.1    ADTU01025889    GECZ01031585    GECZ01030749    GECZ01027876    GECZ01019205    GECZ01018616    GECZ01014668    GECZ01012421    GECZ01005108    GECZ01001891    GECZ01001419    GECZ01000022    JAS38184.1    JAS39020.1    JAS41893.1    JAS50564.1    JAS51153.1    JAS55101.1    JAS57348.1    JAS64661.1    JAS67878.1    JAS68350.1    JAS69747.1    KQ982320    KYQ57786.1    BABH01011332    GECZ01002593    JAS67176.1    NWSH01001143    PCG72417.1    GECZ01003828    JAS65941.1    GECU01010179    JAS97527.1   

Proteomes

UP000005204    UP000037510    UP000218220    UP000053240    UP000053268    UP000007151    + More
UP000007110    UP000007755    UP000005205    UP000078541    UP000075809    UP000079169    UP000007875   

PRIDE

H9JUI0    H9JUE7    H9JUQ7    H6AGY1    H9JUQ8    H9JUK7    + More
H9JHN5    H9JUK8    H9JUH9    H9JKZ2   

Pfam

PF00106   adh_short        + More
PF00292   PAX

Interpro

IPR002347   SDR_fam        + More
IPR036291   NAD(P)-bd_dom_sf       
IPR020904   Sc_DH/Rdtase_CS       
IPR036388   WH-like_DNA-bd_sf       
IPR009057   Homeobox-like_sf       
IPR001523   Paired_dom       

SUPFAM

SSF51735   SSF51735        + More
SSF46689   SSF46689       

Gene 3D

1.10.10.10    

ProteinModelPortal

H9JUI0   A0A0L7LIU8   A0A2H1X3T6   A0A2H1VBR9   H9JUE7   A0A2A4IZG3   + More
H9JUQ7   A0A2A4J612   H6AGY1   H9JUQ8   A0A2A4JIX4   A0A0L7KSS2   H9JUK7   A0A2A4JHN9   A0A2H1VC89   A0A0L7KLX4   A0A2H1WUW2   H9JHN5   I4DS66   A0A2A4ITT1   A0A0N0PC39   A0A2H1WS78   A0A2A4JH23   A0A2H1VHE2   A0A2A4J0E8   A0A194PR87   A0A0N0PAS3   A0A2A4J134   Q9NBB5   A0A0L7KN57   H9JUK8   A0A2A4IZU2   A0A0N0PB24   A0A2A4JIE3   A0A2A4JHX2   H9JUH9   A0A2A4JIH1   A0A0L7LH86   A0A194PJG5   A0A0N1IFH9   A0A2H1WMX1   A0A194PID7   A0A0L7KSR6   A0A212EJ88   A0A0N1PFW5   A0A0L7LK01   A0A0L7KZ86   A0A194PKC3   A0A212EJ84   A0A0N1IGV7   A0A2H1V3T7   A0A194PT74   A0A194PIN0   A0A2W1BUV9   A0A212EP45   A0A2H1WTS2   A0A2W1BSW8   A0A194PXT8   A0A212F231   A0A194PPC7   A0A2H1VYS0   A0A0N0PET2   D2SNW1   A0A1Q3G5G6   A0A2H1WFW5   A0A2W1BZ77   A0A0L7KMQ4   A0A2A4JIM8   A0A0N1IIA2   W4XCM2   A0A2H1VAH5   A0A0N1IHB9   A0A194Q138   A0A212ETR6   F4WG14   A0A158NTG0   A0A2H1WPX2   F4WG13   A0A194Q286   A0A0L7KZH2   A0A0N1IDX2   A0A158NTG1   A0A2W1BZM6   A0A1Q3G5H6   A0A151JWN0   I4DQC6   I4DJE1   A0A2H1X3K0   F4WG12   A0A158NTI2   A0A1B6H0Z8   A0A151XBN1   H9JKZ2   A0A1B6GXM3   A0A1S3D915   A0A2A4JK27   W4XCM1   H2ZEY1   A0A1B6GU46   A0A1B6JEH2  

PDB

1SPX     E-value=5.51573e-36,     Score=376

KEGG

101737760    no KO assigned | (RefSeq) 17-beta-hydroxysteroid dehydrogenase 14-like

GO

GO:0016491   GO:0016021   GO:0005634   GO:0007275   GO:0003677   GO:0006355  

Subcellular location

Nucleus  

Length:

249

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

3.35710000000001

Exp number, first 60 AAs:

3.05389

Total prob of N-in:

0.18612

outside

1  -  249

 

 

Pi

135.323822

Theta

126.617151

Tajima's D

0.285727

CLR

3.392316

CSRT

0.453627318634068

Interpretation

Uncertain