Silkworm Genome Informatics Database

Gene

KWMTBOMO09955

Pre Gene Modal

BGIBMGA013233

Annotation

PREDICTED:_HIRA-interacting_protein_3-like_[Bombyx_mori]

Location

Bomo_Chr16(-):12745071-12757492 View in EpiBrowser

Location in the cell

Nuclear Reliability : 4.281

CDS

ATGAATTATGAAGCCGAAAGAGCCATGAACCAAAAGAGATTGCGTATGGAGGCGGAACCTGGCCATGGAGTGGTGCAAGGAAACGGTTTACCACTCAATTATATCGATAATGGTCATCAAATACCTTACCAGCCCTATGCTGGGGCCTACAATACCCACTACCCGCCCCCGGATGCGTTCGCAGCGTACGGACCGCCACCACCAGGAGGCTATGCCCCACAGAACCTGTCTTATGCACCTCCTGCTCATCAAAATTATGCTCATCACCAGAGTTTCCCACCACAGCAGCCTCCACAGGCCCAGTTGCATATGCAGTCACACATGGGTTATGGTGATGTGGGTGTTCACAAGCCTGCGTGGCCTCCACAACCACACCTACTACCACCGCTCGACGCTCAAAAACCAATAGATGTGAAACAACTTAAACCGGAAATCAAACTTGAGCCCACAGATGCCCAAAAACGACCACACCCCGAAGCTGAAATGATGAGTGAAATGGATCAGCCAAAAATAAAAATCAAAACAGACATTTTTAAGCCTGATGACTTAGCACACAGACCCATTGAAAAACCTATAGATGCACACATACATAAACCATTAGAAGGTGCACAAAAGCCAACAGATCTACAGAATAAGGATGAAGGACAGCCGAATACAATAGTTGACATCAAATTAGGAGAGAAACCGACTGAGTCGAGCAAGGGGGACGGCAGCGCGGAGGCGGGGGAGCCCCGGCCCGCGGACTCCGCCGCCCCGGCCGCGCCCAACAGTGATATCGACAGGAAACCGTTCAGTAGTCCAGAGCTGCCGAAGTCGGGCTCCGTGCCGGGGAAGGCGCCCACCCCGAGCTCCGAGCCGAAGAAGAGAGGTCGCCCTAAGGGGTCGACGAACAAACCGAAGCCCCCCGGCGTGACCGGCAAGCTGGTCCCCAACATGGCGGCGGGCGGGGGGGCGCCGCGCGGGCCCCCTCCCCGCGCCCCCGCCGCGCCCCTGCGCCCGCGCTGCACCGGCTACCAGTACGCCGTCCGGGCCTACAGGAAGGACTTCTCCGGGATACAGTTCAGAAGGCGCTGGAGCGACGACTGCCTGGACTCGTCGCACATCCCCAACGAGGTGTACTTCGGCGACGTGCCGGTGTCCACGGAGGTGCTGTTCAACTACTACGACGCGAACGCGGAGCGCGAGCGGCTGGCGACGCAGGCCGCGCAGATCGCCGCGCAGAAGGCCGCCGCCGCCAAGCTCGCCGCCGCCAAGCTGCAGGCGCGGGGCGTCGTCTCCAACGAGGTCACAACAGTCGATTCATCATCGTCAGACGATTCGTCAGGGTCCGAAGGCAGCGATTCTGAAGACAGCGACGAGGACGCCCCCCTAAAACGAGGTCCAGGCAGACCGAAGGGCTCCAAGAATTCTCCGCGGCCCCCCGGAGCGACGCCCCCCGGCGCCACGCGGCGCGGCCGGCCCCCCGTGCCCCCCGAGCTGCGCCAGCCCGGCATCACCGACATGAAGAAGTTCTGCAAGGCGGCCGGCATCCGGTTCGATTACAAGAAGCTTGTTGAAGGTTGCACGAAAAACAAAGAAAGAGTTGAGAAGATGCTAGAGCTGCTGGTCGCGGCCGGGCTCGAGGGGAAGCCCACGCTGGAGAAGTGCAAGGCGATGAAACAAGCCAAACTAGACAAGAAGGAGCAAGAGAAGCTCGCCAAGAAAGAAGCGAAAGCGAAACACAAAGACGACCCTGCGGAGCCGGCGGCGGGCTCGTGCCGGCGCATGACGCGCGGCGCCACGGGCGTGAAGCCGCGCCAGCGCATCGTCATCTCGTCGGACGAGGAGGACGACACCCCGCAGGCGCGCCGCACGCTCTCCAAGCTGCGCTCCAGCGTCAACGACCACTCCGACTCCGACTAG

Protein

MNYEAERAMNQKRLRMEAEPGHGVVQGNGLPLNYIDNGHQIPYQPYAGAYNTHYPPPDAFAAYGPPPPGGYAPQNLSYAPPAHQNYAHHQSFPPQQPPQAQLHMQSHMGYGDVGVHKPAWPPQPHLLPPLDAQKPIDVKQLKPEIKLEPTDAQKRPHPEAEMMSEMDQPKIKIKTDIFKPDDLAHRPIEKPIDAHIHKPLEGAQKPTDLQNKDEGQPNTIVDIKLGEKPTESSKGDGSAEAGEPRPADSAAPAAPNSDIDRKPFSSPELPKSGSVPGKAPTPSSEPKKRGRPKGSTNKPKPPGVTGKLVPNMAAGGGAPRGPPPRAPAAPLRPRCTGYQYAVRAYRKDFSGIQFRRRWSDDCLDSSHIPNEVYFGDVPVSTEVLFNYYDANAERERLATQAAQIAAQKAAAAKLAAAKLQARGVVSNEVTTVDSSSSDDSSGSEGSDSEDSDEDAPLKRGPGRPKGSKNSPRPPGATPPGATRRGRPPVPPELRQPGITDMKKFCKAAGIRFDYKKLVEGCTKNKERVEKMLELLVAAGLEGKPTLEKCKAMKQAKLDKKEQEKLAKKEAKAKHKDDPAEPAAGSCRRMTRGATGVKPRQRIVISSDEEDDTPQARRTLSKLRSSVNDHSDSD

Uniprot

A0A3S2NEP2 A0A2H1V2J7 A0A2A4ISQ3 A0A2A4IT75 A0A0N1IMT6 A0A0N1PIN3 + More
A0A212FJ20 A0A2A4ITH5 A0A2A4ITU5 A0A2A4IRS1

Pubmed

26354079 22118469

EMBL

RSAL01000158 RVE45543.1 ODYU01000380 SOQ35068.1 NWSH01008089 PCG62699.1 + More
PCG62696.1 KQ459388 KPJ01145.1 KQ460655 KPJ12956.1 AGBW02008320 OWR53722.1 PCG62698.1 PCG62694.1 PCG62697.1

Proteomes

UP000283053 UP000218220 UP000053268 UP000053240 UP000007151

Interpro

IPR037647 HIRIP3

ProteinModelPortal

A0A3S2NEP2 A0A2H1V2J7 A0A2A4ISQ3 A0A2A4IT75 A0A0N1IMT6 A0A0N1PIN3 + More
A0A212FJ20 A0A2A4ITH5 A0A2A4ITU5 A0A2A4IRS1

KEGG

101738561 no KO assigned | (RefSeq) HIRA-interacting protein 3-like

GO

PANTHER

PTHR15410

Length:

633

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00095

Exp number, first 60 AAs:

0.00095

Total prob of N-in:

0.00151

outside

1 - 633

Pi

258.885528

Theta

185.97574

Tajima's D

1.66659

CLR

0.3345

CSRT

0.825908704564772

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics