SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO09953
Pre Gene Modal
BGIBMGA013184
Annotation
PREDICTED:_uncharacterized_protein_LOC101738693_[Bombyx_mori]
Location in the cell
PlasmaMembrane   Reliability : 4.025
 

Sequence

CDS
ATGGGCAGTTTACCAGACCTGACGGAGCGGTCCCGCCCGGCGCCACGGATCGCCGTACGAACCGTGTCCGACCCCCACAGGAATCGGACTATTATTACTCAGATACCAGTGAACGCAATATATAAGAAAGATTGGCCATGGAGGAAATCGAAGACCCCTATTCGAGTAGGCCCCGCCGTATCTGCCAGAAGACGAGAATCGGCTGCTTCTTCTCTTGGCGCCGCATCAGTCCGGAGACTTCTGGCTCGCCCACCCCAAAAACTACCCAGAACTTTAGTGCACAGATTCACCCTTTTGTGTATTTCGAGTGGTCTTTGTGCCACAGCCCTACATCCATTCACAGCATTCGCTGGAGCAGAAGCCGGTTCCTTACCTTTAGCCATAATGCATTCGATAGCGGCTATAACAGCCCCATTCGCACCTCTAATACTACAGAAGACTGGTAACAGGATAGTAATAACTGTAGCTCACATATTGGTGTTTATTCTTCTAACGGCGCACACAGTGGCCACTCCTCTGTCTGTTCTTCTGTTTCTCTACGCTCTGTGTGGGTTGAGTCTATCGCCAATGTCTCTAGCTCTTGCAGCCTCAGCCAATTCTTTAGCGCAGGCGGCGGGTGATGAAAGTAGACGAAAAATAGCTTTGAGACGGGCACTGAGGGCTCTGAGAGCGGCTCACGACTTGGGTCTGGTGTTTGGGTCTCTCCTTCTTGGTGCAGCGCTAATTATTTGGCCCGAAAATGTCACTCAACAAACTGATGCTCCCTTGAATATGACATTATCACAGTGGTCGTCTCCTGTAGATGATTACTTTTTGGAGGACAACTATGAGGAAACCACATGTGGTGCCGCTGGCTGTCCCGACACGCAGTCCACTATCGGTATAGTCCTCAACGCTGATGGACGAAGGGTCCTCGTAGCTGTCTGGGCATTTGTATCATTATCATCGATAGGACTAGGAGTGTACGGAGCTCCATCAAGTCCAGCGCCACCGCCGGATGCCCGTTCCATTTTTAGAGATCCAAGGGCACTTCTTGGAGCTCCTATGGGCTTGTTTATAGGTCTACAGCAAGGGTTTATATACACTTCTTATATTAAGTGGTATGGAGTATGTGTGGACGGTTGGTGGTGTGCATGGCGGGCCTTAGTCGGTGCTGGAGCGTTCCAGGCTCTTGCAGCTGGTACTCTAAGTATGGCTGCGGCTAGAGGTCGCCGAGGGGCTTTAGTGGCTGGAGGAGGAGCTGCACATGCAAGCCTCGTGCTAGCTCTGCTAAGGTGGAGGGCCGCTAGAACTGATCTTGCGCTACCAGCACTCGCAGCCGCTGCGTGGGGCGCTTGTTCAGCACTTTGGGATGTCTTACAGGGTGGTCTTTGCATCGGCGGCCCAGGGTGGCGAGGTCCTTGGTCAGTAGTGCTGTGCGCCCGACATACAGGATTGGCCCTCGCGTGTGCAGCGAGACATTCACTGTGCGTAAGGACGCAGCTACCTGCATTAGCAGCAGCGTTAGCGGCAGCCCTGGCATCTCACACTGCACTTGAGATTCGAATGAGGAAAGGTGAGGCCAACCGTCATAGATCCTAG
Protein
MGSLPDLTERSRPAPRIAVRTVSDPHRNRTIITQIPVNAIYKKDWPWRKSKTPIRVGPAVSARRRESAASSLGAASVRRLLARPPQKLPRTLVHRFTLLCISSGLCATALHPFTAFAGAEAGSLPLAIMHSIAAITAPFAPLILQKTGNRIVITVAHILVFILLTAHTVATPLSVLLFLYALCGLSLSPMSLALAASANSLAQAAGDESRRKIALRRALRALRAAHDLGLVFGSLLLGAALIIWPENVTQQTDAPLNMTLSQWSSPVDDYFLEDNYEETTCGAAGCPDTQSTIGIVLNADGRRVLVAVWAFVSLSSIGLGVYGAPSSPAPPPDARSIFRDPRALLGAPMGLFIGLQQGFIYTSYIKWYGVCVDGWWCAWRALVGAGAFQALAAGTLSMAAARGRRGALVAGGGAAHASLVLALLRWRAARTDLALPALAAAAWGACSALWDVLQGGLCIGGPGWRGPWSVVLCARHTGLALACAARHSLCVRTQLPALAAALAAALASHTALEIRMRKGEANRHRS

Summary

Pfam
PF05978   UNC-93
Interpro
IPR036259   MFS_trans_sf        + More
IPR010291   Ion_channel_UNC-93       
SUPFAM
SSF103473   SSF103473       

Ontologies

Topology

Length:
526
Number of predicted TMHs:
9
Exp number of AAs in TMHs:
197.81692
Exp number, first 60 AAs:
0.00052
Total prob of N-in:
0.92007
inside
1  -  95
TMhelix
96  -  118
outside
119  -  121
TMhelix
122  -  144
inside
145  -  150
TMhelix
151  -  170
outside
171  -  179
TMhelix
180  -  202
inside
203  -  221
TMhelix
222  -  244
outside
245  -  303
TMhelix
304  -  323
inside
324  -  342
TMhelix
343  -  365
outside
366  -  377
TMhelix
378  -  400
inside
401  -  406
TMhelix
407  -  429
outside
430  -  526
 
 

Population Genetic Test Statistics

Pi
264.903618
Theta
192.719527
Tajima's D
1.080043
CLR
0.104616
CSRT
0.680365981700915
Interpretation
Uncertain
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