Gene

KWMTBOMO09948

Annotation

PREDICTED:_uncharacterized_protein_LOC106141830_[Amyelois_transitella]

Location

Bomo_Chr16(+):12632973-12635440      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 3.825

CDS

ATGCCGATCACCAGGAGCAACAAGGGATCATCGAGGGAACAGCCACTCGAACCTGCGGTTCAAGAATCCAGTCCGGAGGCAACAGAAGCGACGTCGTACGAAACATACGAGAGCTCCGCGACCGGTACGACCCAGAACACAAAACTTGAAGAGGCAACGACGCGGACACGTGGTAAAAATAGACCCGCGTCGAAGAAATCGCTACGACGTAAGGAACTGGCAGCGAGAGCGGAGCTGGCGGAAAAAGAATTGATAGAAGCACAAGCAGCCACCATAGCCGCCAGACTCCGCCTGCAATTGATTCAGGCCGAAAGCGAAGACGACGATGATTCCAATATAGAAGAGCCAAAGGACCGGGAGGACCAGGTCAGGGCCTGGGTCCAGACGTCGGCGGGCAGTATGGACAAGGAGCACGCAGGCGAGCACATTGAGAACCACCCCGTCAGCAAGGCCAACATGGAAGATTGCAGCAACAGGGACCTGGCTAAGGCGATAGTGGAAGCGGTGAGGAGCGCAACGACCAAGGAGCTGCCACCACAACCCGACTACATGCACCAGTTGCCGACGTTCGAAGGCGACTGCAGGGAGTGGGTGGCCTTCAAGGCTGTCTACGAGGATACCGCTCCACTCTTCTCAAGCGCTCAAAACATGGCGCGGCTGAGAAGAGCGCTGAAGGGACAAGCCAGGGAAGGAGTCCGCAGCCAGCTGTACTCCGAGAGCACACCGGAGGAAGTAATGGAATCACTGCGGCGGTGCTATGGAAGGGCGGACGCTTTAGTCTTAGCGGAGTTAGACCGCATACGAAGACTTCCGACGATAAGCGACTCCGCCTACGACATTTGCTCACTGGCGAGCAATGTTAACAATACCGTCGCAGCGATCAGGGGGCTGCGGAAACCCCAATATTTGATGTCGCCCGAGCTGTTGAAAAGCATCGTCGACAAAATGCCGACCATCTTGAGGTTCCGGTGGTACGACCACATCATCGAAAAGACTGAAGGAGACCCGGACCTCAACACGATGTGCGGCTTCCTGAACAAGATGGCGGACCGGTGCGGGCCACACGCCGTGGCTGAAGTAGCAACGAAAAGACAACCATCGAGGCGACAGGCGACGCACGCCACAACCGACTGCACCGAGCGCGCAACTTCGGACAGAGTAATAATAGACAAGCCGGCGTGCCCGCAGTGTAAGGAAGGACACCCGCTGTATGATTGTCCGAGGTACGAGAGAGCCACGGTGCAGGAACGATGGAGAATGGCAAAGGAGTCGCGCCTATGTTACAAGTGCCTCGACGGTAAGCACCGGAAGCAATCGTGTCAACGACCGCCATGCCACACGTGCAAGCGCTGGCATCACCACTCGCTACACAACGAGAAGTCGGAGACAGAGCCAGCAGAGAACAGGGAAATCGCGAACAACGTGCGACTTCCCATCAACTGCACACGGATCAGCAGGGCGTACTTGAAGATGGTGCCCGTTGAAGTGTACGGGCCATCGGGATCGACGACGGTGCTGGCCCTGCTGGACGAAGGCTCCACTGTAACTCTCCTGGACTCGAGCGTGGCGAAGCAGATCGGCCTGAAGGGACCCAAGGAGACGCTCCGCCTCGAGACCGTGGGCGGGAAGACCCTAACGAAGAAGGACTCGATGAAGCTTAACATCAGAGTTCGAGGGCTTCACCAGCGGCAGAAGAGAATGATCTTCGGAGCGCGCACAATGGATGACATGAGCCTTGCACCCCAGCGATTGAAAAGAGAGACCATCGAAGGCTACGCGCACCTGAGGAGCCTAGCGGACCAGTTATATTACGAAGAACAATCCCCCAAACTATTGATTGGGCAGGACAACTGGGGACTCATCGCCTCCAAGACGACGCGCAGGGGCAAGAGGAACCAGCCGGTAGCCTCATTCACCCAATTGGGATGGGTGCTACATGGTCTCGACGGCAATAACGCAAAAGAGGTCAACTTCCTCACCTGCGCCCATGTATCGATGCGCGAAGAGGCCTTGGACAGACTGGTGAAGGAGCACATCGCGATAGAGTCGCACCCAAGCGTCCGAGCACGGATATGGAGGCGAAGGCGTTTGACATCTTGGAGAAGGAGGACGACAGAGGTCGGAGACGCGAAGACGACCGCTTCGAAACTCGGACCTACAATCCCTGTTCGGAGTGTTGTTGCGGCTCCGGGAAAGGCTCGTCGTGGTTGTCGCGGACATCAAGGAGAGGTTCCTGCAGATAAGGATCAGGGACGTGGACCGCGACAGCCCAAGATTCCTCTATAG

Protein

MPITRSNKGSSREQPLEPAVQESSPEATEATSYETYESSATGTTQNTKLEEATTRTRGKNRPASKKSLRRKELAARAELAEKELIEAQAATIAARLRLQLIQAESEDDDDSNIEEPKDREDQVRAWVQTSAGSMDKEHAGEHIENHPVSKANMEDCSNRDLAKAIVEAVRSATTKELPPQPDYMHQLPTFEGDCREWVAFKAVYEDTAPLFSSAQNMARLRRALKGQAREGVRSQLYSESTPEEVMESLRRCYGRADALVLAELDRIRRLPTISDSAYDICSLASNVNNTVAAIRGLRKPQYLMSPELLKSIVDKMPTILRFRWYDHIIEKTEGDPDLNTMCGFLNKMADRCGPHAVAEVATKRQPSRRQATHATTDCTERATSDRVIIDKPACPQCKEGHPLYDCPRYERATVQERWRMAKESRLCYKCLDGKHRKQSCQRPPCHTCKRWHHHSLHNEKSETEPAENREIANNVRLPINCTRISRAYLKMVPVEVYGPSGSTTVLALLDEGSTVTLLDSSVAKQIGLKGPKETLRLETVGGKTLTKKDSMKLNIRVRGLHQRQKRMIFGARTMDDMSLAPQRLKRETIEGYAHLRSLADQLYYEEQSPKLLIGQDNWGLIASKTTRRGKRNQPVASFTQLGWVLHGLDGNNAKEVNFLTCAHVSMREEALDRLVKEHIAIESHPSVRARIWRRRRLTSWRRRTTEVGDAKTTASKLGPTIPVRSVVAAPGKARRGCRGHQGEVPADKDQGRGPRQPKIPL

Uniprot

Q2MGA5   A0A2H1W036   A0A2H1W498   A0A2H1WIC2   V9GZQ1   A0A3S2N5J7   + More
A0A2A4IX21   A0A0A9ZAM6   A0A0A9ZFI6   A0A0A9ZJ56   A0A0A9ZGM2   A0A0A9ZDG1   A0A0L7KW57   A0A0L7L0N3   A0A0L7KYG1   A0A226DIM6   A0A0A9WZV8   A0A146LFU3   A0A182GC70   A0A182RWX5   A0A226E2P7   A0A226EEI4   A0A182HDB0   A0A226EDU9   Q76C94   Q76C95   O02006   A0A182HEF9   A0A1L8DJ10   A0A1L8DIN5   A0A2M4CKZ8   A0A226D278   A0A226EKF8   A0A1W7R6D5  

Pubmed

8389039    25401762    26227816    26823975    26483478    8925473    + More

EMBL

AF530470    AAQ09229.1    ODYU01005530    SOQ46470.1    ODYU01006218    SOQ47868.1    + More
ODYU01008796    SOQ52706.1    L09635    AAA75005.1    RSAL01000375    RVE42106.1    NWSH01005440    PCG64209.1    GBHO01002130    JAG41474.1    GBHO01000310    JAG43294.1    GBHO01000309    JAG43295.1    GBHO01000308    JAG43296.1    GBHO01000307    JAG43297.1    JTDY01005167    KOB67301.1    JTDY01003744    KOB69058.1    JTDY01004423    KOB68175.1    LNIX01000019    OXA44537.1    GBHO01030330    JAG13274.1    GDHC01011496    JAQ07133.1    JXUM01053894    KQ561796    KXJ77517.1    LNIX01000007    OXA52015.1    LNIX01000004    OXA55241.1    JXUM01034199    KQ561015    KXJ80028.1    OXA55408.1    AB110069    BAD01590.1    BAD01589.1    D83207    BAA57030.1    JXUM01005879    KQ560203    KXJ83865.1    GFDF01007760    JAV06324.1    GFDF01007772    JAV06312.1    GGFL01001727    MBW65905.1    LNIX01000039    OXA39263.1    LNIX01000003    OXA57597.1    GEHC01000921    JAV46724.1   

Proteomes

UP000283053    UP000218220    UP000037510    UP000198287    UP000069940    UP000249989    + More
UP000075900   

PRIDE

V9GZQ1   

Pfam

PF03564   DUF1759        + More
PF05380   Peptidase_A17
PF00665   rve
PF18701   DUF5641
PF00628   PHD
PF17921   Integrase_H2C2
PF05585   DUF1758
PF00078   RVT_1

Interpro

IPR040676   DUF5641        + More
IPR036397   RNaseH_sf       
IPR005312   DUF1759       
IPR001584   Integrase_cat-core       
IPR008042   Retrotrans_Pao       
IPR012337   RNaseH-like_sf       
IPR001878   Znf_CCHC       
IPR001995   Peptidase_A2_cat       
IPR021109   Peptidase_aspartic_dom_sf       
IPR019786   Zinc_finger_PHD-type_CS       
IPR011011   Znf_FYVE_PHD       
IPR013083   Znf_RING/FYVE/PHD       
IPR001965   Znf_PHD       
IPR019787   Znf_PHD-finger       
IPR041588   Integrase_H2C2       
IPR008737   Peptidase_asp_put       
IPR000477   RT_dom       

SUPFAM

SSF53098   SSF53098        + More
SSF57903   SSF57903       

Gene 3D

3.30.420.10     2.40.70.10     3.30.40.10    

ProteinModelPortal

Q2MGA5   A0A2H1W036   A0A2H1W498   A0A2H1WIC2   V9GZQ1   A0A3S2N5J7   + More
A0A2A4IX21   A0A0A9ZAM6   A0A0A9ZFI6   A0A0A9ZJ56   A0A0A9ZGM2   A0A0A9ZDG1   A0A0L7KW57   A0A0L7L0N3   A0A0L7KYG1   A0A226DIM6   A0A0A9WZV8   A0A146LFU3   A0A182GC70   A0A182RWX5   A0A226E2P7   A0A226EEI4   A0A182HDB0   A0A226EDU9   Q76C94   Q76C95   O02006   A0A182HEF9   A0A1L8DJ10   A0A1L8DIN5   A0A2M4CKZ8   A0A226D278   A0A226EKF8   A0A1W7R6D5  

KEGG

101747137    no KO assigned | (RefSeq) uncharacterized LOC101747137

GO

GO:0015074   GO:0003676   GO:0008270   GO:0004190   GO:0003964   GO:0071564   GO:0046872   GO:0016021  

Length:

761

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00038

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00017

outside

1  -  761

 

 

Pi

78.517331

Theta

128.732539

Tajima's D

-1.212728

CLR

480.55349

CSRT

0.103144842757862

Interpretation

Uncertain