Silkworm Genome Informatics Database

Gene

KWMTBOMO09940

Pre Gene Modal

BGIBMGA013182

Annotation

uncharacterized_protein_LOC778477_[Bombyx_mori]

Location

Bomo_Chr16(+):12516015-12518087 View in EpiBrowser

Location in the cell

Nuclear Reliability : 3.868

CDS

ATGTCAGATTCATCTGAAGATGAAGACCTATCGCGTTTCAAAGACGTCGTCGACAACTCTTTCGTTAAATCTCTATCCCAAACTCGTGTTACAGGATCTAAAACAATTCAAGGCATTGAAGAAAAGCCCGTCTCCCAACGTTACTTAGAAATATCAAGCCACTACAATGATGTGAAGGTTCCAGAAGAAATGCAAAAAAGAATTGGTGCTAAATTATCAGCTGTCATACAGAAAAATACAAGATTTGTAGATGTGGACCCTGTTCAACCAAAAAAACGCAAAATAAAGGGAGGTGTAAAATTGTTCAAGAATTCAAATGGATTTTTATCTTGTGATGACATTAAGGACATATCCACTGAGAAACATAATTGTGAAGCGAAACTGTTAAAGTATAGTAAAGTTGGTCCTGACTCAGATGACATAGAAATATCTAAATCTGCTGTGGAGTAG

Protein

MSDSSEDEDLSRFKDVVDNSFVKSLSQTRVTGSKTIQGIEEKPVSQRYLEISSHYNDVKVPEEMQKRIGAKLSAVIQKNTRFVDVDPVQPKKRKIKGGVKLFKNSNGFLSCDDIKDISTEKHNCEAKLLKYSKVGPDSDDIEISKSAVE

Similarity

Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.

Uniprot

Q0PKR9 A0A2H1WW36 A0A2A4JNJ6 A0A1E1WES4 A0A437B4Y6 A0A0N1IP83 + More
A0A212FJ26 A0A0N0P9I4 S4PGG2 A0A182G3Z6 A0A1Q3F7F8 A0A1S4FSE8 Q16QV9 Q16QV7 A0A1I8NDX5 N6TLV9 B0X5M0 A0A175J8F2

Pubmed

26354079 22118469 23622113 26483478 17510324 25315136 + More
23537049

EMBL

DQ813504 ABG67690.1 ODYU01011504 SOQ57275.1 NWSH01001037 PCG72992.1 + More
GDQN01005561 JAT85493.1 RSAL01000158 RVE45551.1 KQ460655 KPJ12963.1 AGBW02008320 OWR53731.1 KQ459388 KPJ01131.1 GAIX01003687 JAA88873.1 JXUM01041642 KQ561292 KXJ79093.1 GFDL01011568 JAV23477.1 CH477729 EAT36792.1 EAT36794.1 APGK01019088 KB740092 ENN81434.1 DS232386 EDS40957.1 BDDW01000010 GAT88329.1

Proteomes

UP000218220 UP000283053 UP000053240 UP000007151 UP000053268 UP000069940 + More
UP000249989 UP000008820 UP000095301 UP000019118 UP000002320 UP000078426

PRIDE

Q0PKR9

Pfam

PF00202 Aminotran_3

Interpro

IPR026694   CUSTOS        + More
IPR005814   Aminotrans_3
IPR015422   PyrdxlP-dep_Trfase_dom1
IPR015421   PyrdxlP-dep_Trfase_major
IPR015424   PyrdxlP-dep_Trfase

SUPFAM

SSF53383 SSF53383

Gene 3D

3.40.640.10 3.90.1150.10

ProteinModelPortal

Q0PKR9 A0A2H1WW36 A0A2A4JNJ6 A0A1E1WES4 A0A437B4Y6 A0A0N1IP83 + More
A0A212FJ26 A0A0N0P9I4 S4PGG2 A0A182G3Z6 A0A1Q3F7F8 A0A1S4FSE8 Q16QV9 Q16QV7 A0A1I8NDX5 N6TLV9 B0X5M0 A0A175J8F2

KEGG

778477 no KO assigned | (RefSeq) uncharacterized LOC778477

GO

GO:0016055 GO:0030170 GO:0008483

PANTHER

PTHR14482

Length:

149

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0

Exp number, first 60 AAs:

0

Total prob of N-in:

0.07412

outside

1 - 149

Pi

298.04026

Theta

181.478224

Tajima's D

2.048253

CLR

0

CSRT

0.893955302234888

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics