Gene

KWMTBOMO09939

Pre Gene Modal

BGIBMGA013243

Annotation

PREDICTED:_mitochondrial_import_inner_membrane_translocase_subunit_Tim22_[Papilio_machaon]

Location

Bomo_Chr16(-):12513454-12515574      View in EpiBrowser

Location in the cell

PlasmaMembrane   Reliability : 2.263

CDS

ATGGGTGAATACCGGAGACCACCTCCAGACCAAAATTTAGTGAACTTTACCCAAAATAGTGATTATGATTCGCTTGCAAAATATTTGATAGGCAACAACTACAGATTTCGTGAAAATATCATTATACCAAGAATTCTTGGACCTGTTATAATTAAAACCAATGAGGAGAAGATGATCGAGGCAACGGTTGAGAGCTGTCCCTTTAAATCATTGACTAGTTGTATAATTGGATATGGTCTCGGAGCAGCAGTGGGTCTATTCACATCTTCCCTGATGCCTAACGTAACAGATACTACTGCCCAACAAAATCAAACGGCTAGAGAGATTTTACGGGAAATGAAAAACTCCATGTTGAGTTATGGAAAAAACTTTGCGATACTTGGTGCTGTGTTTTCTGGGGTCGAGTGTTGTATCGAAACAGCAAGGGGGAAGTCCGACTGGAAGAACGGTACTTATGCTGGAGGAATTACAGGAGGATTAATTGGATTAAGAGGTGGATTAAAAGCTGGCATGTTTGGAGCGATGGGATTTGCAGCCTTTTCCACGATCATTGACTACTATATGCATCAACGGGCTTAA

Protein

MGEYRRPPPDQNLVNFTQNSDYDSLAKYLIGNNYRFRENIIIPRILGPVIIKTNEEKMIEATVESCPFKSLTSCIIGYGLGAAVGLFTSSLMPNVTDTTAQQNQTAREILREMKNSMLSYGKNFAILGAVFSGVECCIETARGKSDWKNGTYAGGITGGLIGLRGGLKAGMFGAMGFAAFSTIIDYYMHQRA

Uniprot

H9JUN0   A0A1E1WHR2   A0A0N0PC46   A0A212FJ28   A0A0N0P9V2   A0A2A4JLY3   + More
A0A2H1WP47   A0A0L7KG57   A0A3S2NA46   A0A1A9YDQ5   B0X2Y3   A0A023EJD9   Q17Q11   A0A1A9UTG7   A0A1B0G195   A0A1B0B321   A0A2M4ANM6   W5JHI4   A0A1A9ZSR9   T1E7Y6   A0A2M4C041   U5EJS0   A0A1Q3FB94   A0A182INN9   A0A1Y1NE10   A0A182Q654   A0A023EHX7   A0A336LYR2   A0A1I8PHQ7   A0A182VWM7   A0A182MPC4   A0A182PT24   A0A1A9W9I2   A0A182T2C5   A0A182XE41   A0A182LCG0   Q7QBE9   A0A182HJ82   A0A1W4XJU4   A0A2J7PNV0   A0A1B6JHE2   A0A182UEW9   A0A1I8MFU6   A0A182VJE5   A0A182JWB2   W8CA24   A0A1B6MK95   A0A034WM14   A0A1L8DVQ2   A0A0A1X017   A0A0K8UCR6   J3JUP3   A0A151X4U6   A0A067R5Z6   K7J9N1   A0A151IFX5   A0A1L8DVP9   F4WRF1   A0A182N510   A0A195BFC3   A0A158NUL0   E9IRW3   A0A1B0DAA4   A0A1B0CP48   A0A026W605   A0A195FK22   A0A151JQB5   E2AFV6   A0A182FKU6   A0A1B6DNE3   T1I235   A0A0M4EME0   A0A069DPM6   A0A232EX70   A0A0K8TRF4   A0A0N0BH82   A0A224XZU2   A0A2R7VZC9   B4K8L6   B4JEZ4   T1H6K3   A0A0V0G923   A0A3B0K5M0   A0A154PTF2   A0A2A3EMX1   B3LW75   A0A170ZI05   B4N9V6   A0A182YHI2   B4M3X2   A0A0P4VII8   A0A182RC47   Q299N8   B4QU02   B4PLZ8   A0A1J1J4F0   B3NZ35   B4G5H3  

Pubmed

19121390    26354079    22118469    26227816    24945155    17510324    + More
20920257    23761445    28004739    20966253    12364791    14747013    17210077    25315136    24495485    25348373    25830018    22516182    23537049    24845553    20075255    21719571    21347285    21282665    24508170    30249741    20798317    26334808    28648823    26369729    17994087    18057021    25244985    27129103    15632085    17550304   

EMBL

BABH01022712    GDQN01004673    JAT86381.1    KQ460655    KPJ12964.1    AGBW02008320    + More
OWR53732.1    KQ459388    KPJ01129.1    NWSH01001037    PCG72991.1    ODYU01010008    SOQ54808.1    JTDY01009900    KOB62303.1    RSAL01000158    RVE45552.1    DS232303    EDS39485.1    GAPW01004511    JAC09087.1    CH477188    EAT48783.1    CCAG010001934    JXJN01007759    GGFK01009075    MBW42396.1    ADMH02001488    ETN62370.1    GAMD01002652    JAA98938.1    GGFJ01009483    MBW58624.1    GANO01002131    JAB57740.1    GFDL01010190    JAV24855.1    GEZM01010735    JAV93867.1    AXCN02000180    GAPW01004921    JAC08677.1    UFQT01000045    SSX18808.1    AXCM01020305    AAAB01008879    EAA08395.3    APCN01002131    NEVH01023289    PNF17996.1    GECU01009072    JAS98634.1    GAMC01001654    JAC04902.1    GEBQ01012006    GEBQ01009827    GEBQ01003636    JAT27971.1    JAT30150.1    JAT36341.1    GAKP01004139    JAC54813.1    GFDF01003578    JAV10506.1    GBXI01010066    JAD04226.1    GDHF01033189    GDHF01027852    JAI19125.1    JAI24462.1    APGK01022687    BT126958    KB740442    KB631692    AEE61920.1    ENN80642.1    ERL85404.1    KQ982540    KYQ55397.1    KK852680    KDR18616.1    AAZX01002711    KQ977771    KYN00030.1    GFDF01003577    JAV10507.1    GL888285    EGI63222.1    KQ976504    KYM82870.1    ADTU01026592    GL765283    EFZ16650.1    AJVK01028951    AJWK01021422    KK107390    QOIP01000007    EZA51438.1    RLU20932.1    KQ981522    KYN40612.1    KQ978660    KYN29388.1    GL439158    EFN67705.1    GEDC01010106    JAS27192.1    ACPB03000298    CP012526    ALC46602.1    GBGD01003248    JAC85641.1    NNAY01001792    OXU22908.1    GDAI01000890    JAI16713.1    KQ435759    KOX75672.1    GFTR01002807    JAW13619.1    KK854191    PTY12854.1    CH933806    EDW14415.1    KRG01004.1    CH916369    EDV93275.1    GECL01001743    JAP04381.1    OUUW01000013    SPP87972.1    KQ435095    KZC14628.1    KZ288217    PBC32391.1    CH902617    EDV42653.1    GEMB01002179    JAS01001.1    CH964232    EDW81711.1    CH940652    EDW59333.1    GDKW01002873    JAI53722.1    CM000070    EAL27665.1    CM000364    EDX12425.1    CM000160    EDW95930.1    EDW95932.1    CVRI01000070    CRL07275.1    CH954181    EDV48577.1    CH479179    EDW24839.1   

Proteomes

UP000005204    UP000053240    UP000007151    UP000053268    UP000218220    UP000037510    + More
UP000283053    UP000092443    UP000002320    UP000008820    UP000078200    UP000092444    UP000092460    UP000000673    UP000092445    UP000075880    UP000075886    UP000095300    UP000075920    UP000075883    UP000075885    UP000091820    UP000075901    UP000076407    UP000075882    UP000007062    UP000075840    UP000192223    UP000235965    UP000075902    UP000095301    UP000075903    UP000075881    UP000019118    UP000030742    UP000075809    UP000027135    UP000002358    UP000078542    UP000007755    UP000075884    UP000078540    UP000005205    UP000092462    UP000092461    UP000053097    UP000279307    UP000078541    UP000078492    UP000000311    UP000069272    UP000015103    UP000092553    UP000215335    UP000053105    UP000009192    UP000001070    UP000015102    UP000268350    UP000076502    UP000242457    UP000007801    UP000007798    UP000076408    UP000008792    UP000075900    UP000001819    UP000000304    UP000002282    UP000183832    UP000008711    UP000008744   

PRIDE

H9JUN0   

Pfam

PF00271   Helicase_C        + More
PF00270   DEAD
PF02759   RUN
PF12068   PH_RBD
PF00566   RabGAP-TBC

Interpro

IPR039175   TIM22        + More
IPR001650   Helicase_C       
IPR014001   Helicase_ATP-bd       
IPR011545   DEAD/DEAH_box_helicase_dom       
IPR014014   RNA_helicase_DEAD_Q_motif       
IPR027417   P-loop_NTPase       
IPR037213   Run_dom_sf       
IPR035969   Rab-GTPase_TBC_sf       
IPR004012   Run_dom       
IPR037745   SGSM1/2       
IPR021935   SGSM1/2_RBD       
IPR000195   Rab-GTPase-TBC_dom       

SUPFAM

SSF52540   SSF52540        + More
SSF47923   SSF47923       
SSF140741   SSF140741       

CDD

cd00079  HELICc
cd15784  PH_RUTBC

ProteinModelPortal

H9JUN0   A0A1E1WHR2   A0A0N0PC46   A0A212FJ28   A0A0N0P9V2   A0A2A4JLY3   + More
A0A2H1WP47   A0A0L7KG57   A0A3S2NA46   A0A1A9YDQ5   B0X2Y3   A0A023EJD9   Q17Q11   A0A1A9UTG7   A0A1B0G195   A0A1B0B321   A0A2M4ANM6   W5JHI4   A0A1A9ZSR9   T1E7Y6   A0A2M4C041   U5EJS0   A0A1Q3FB94   A0A182INN9   A0A1Y1NE10   A0A182Q654   A0A023EHX7   A0A336LYR2   A0A1I8PHQ7   A0A182VWM7   A0A182MPC4   A0A182PT24   A0A1A9W9I2   A0A182T2C5   A0A182XE41   A0A182LCG0   Q7QBE9   A0A182HJ82   A0A1W4XJU4   A0A2J7PNV0   A0A1B6JHE2   A0A182UEW9   A0A1I8MFU6   A0A182VJE5   A0A182JWB2   W8CA24   A0A1B6MK95   A0A034WM14   A0A1L8DVQ2   A0A0A1X017   A0A0K8UCR6   J3JUP3   A0A151X4U6   A0A067R5Z6   K7J9N1   A0A151IFX5   A0A1L8DVP9   F4WRF1   A0A182N510   A0A195BFC3   A0A158NUL0   E9IRW3   A0A1B0DAA4   A0A1B0CP48   A0A026W605   A0A195FK22   A0A151JQB5   E2AFV6   A0A182FKU6   A0A1B6DNE3   T1I235   A0A0M4EME0   A0A069DPM6   A0A232EX70   A0A0K8TRF4   A0A0N0BH82   A0A224XZU2   A0A2R7VZC9   B4K8L6   B4JEZ4   T1H6K3   A0A0V0G923   A0A3B0K5M0   A0A154PTF2   A0A2A3EMX1   B3LW75   A0A170ZI05   B4N9V6   A0A182YHI2   B4M3X2   A0A0P4VII8   A0A182RC47   Q299N8   B4QU02   B4PLZ8   A0A1J1J4F0   B3NZ35   B4G5H3  

KEGG

101742578    K17790 mitochondrial import inner membrane translocase subunit TIM22 | (RefSeq) mitochondrial import

GO

GO:0045039   GO:0042721   GO:0016021   GO:0030943   GO:0008320   GO:0005524   GO:0003676   GO:0005096  

PANTHER

PTHR14110  

Length:

192

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

39.78794

Exp number, first 60 AAs:

0.00995

Total prob of N-in:

0.48030

outside

1  -  192

 

 

Pi

161.526747

Theta

153.594651

Tajima's D

0.272459

CLR

0

CSRT

0.446577671116444

Interpretation

Uncertain