SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO09937
Annotation
PREDICTED:_organic_cation_transporter_protein-like_[Plutella_xylostella]
Location in the cell
PlasmaMembrane   Reliability : 4.972
 

Sequence

CDS
ATGGATATGAACGAACTGTCTAACATTGATGGAGTGGGCTTGAGACAAAAGTTTGATATAAAAGAAAATGAAAAAGAAGGTTTCCATGTTATTTTCAAATCTCCAGAGATTTTAAAGAGGGTTTTTGTGGCGTGTTTTTGTAGATTTTCAGCAAGCTTCGTGTATTACGGTCTAATGTTGAATTCTGTTTGGCTTCCCGGTGATAAATACATTAATTTTTTACTAATAACCATAATGTCATATCCAGGAGAATTAATCTCCTTGTATTTCATGAAAAACATTGGAAGGAAATTGTCTTTAATTATTGGATTTATTTTGACCGCAGCGTTGTGTTTCTGCTCCGCTCAAGTGCCCGAGACGTATTTATGGACCAAAATATCGTTATTCCTCGTCGGTAAAATGTTGATATCCGGTTGTTTCACTGGGATCATAACATACTCTATGGAGCTATTTCCGACTAGTGTACGAGGGTTATTACTTGGTCTTGGCGCGCTCACGTCTAGGATCGGGAATATGATGGCACCTCTTACACCGATGTTGATGACCTTTTCACCGTCGATTCCTTCAATATTCTTCGGTTGCGCTGCAGTAATGTCAGGGTTACTTATCATCCTGACGCCGGAGACAAGAGACCAACCGCTGATGGATACGGTACGTCAAGTTGAAGAGAGTGTTCTTAAGGAGAAACAAGTCAATTCCGTTGCAACTGCTATGTAG
Protein
MDMNELSNIDGVGLRQKFDIKENEKEGFHVIFKSPEILKRVFVACFCRFSASFVYYGLMLNSVWLPGDKYINFLLITIMSYPGELISLYFMKNIGRKLSLIIGFILTAALCFCSAQVPETYLWTKISLFLVGKMLISGCFTGIITYSMELFPTSVRGLLLGLGALTSRIGNMMAPLTPMLMTFSPSIPSIFFGCAAVMSGLLIILTPETRDQPLMDTVRQVEESVLKEKQVNSVATAM

Summary

Similarity
Belongs to the GST superfamily.
EMBL
BABH01029577    BABH01029578    ODYU01010552    SOQ55744.1    NWSH01004458    PCG65085.1    + More
RSAL01000091    RVE48029.1    KQ459562    KPI99797.1    KPI99795.1    KPI99792.1    KPI99794.1    KQ460941    KPJ10577.1    KPJ10576.1    AGBW02008840    OWR52418.1    GAIX01012287    JAA80273.1    AGBW02008864    OWR52333.1    KZ149988    PZC75643.1    KPJ10575.1    NWSH01001703    PCG70392.1    RSAL01000015    RVE53128.1    KQ459595    KPI95824.1    KQ460473    KPJ14390.1    ODYU01002742    SOQ40621.1    JTDY01010425    KOB58208.1    BABH01041111    KC740880    AGM32704.1    KK852482    KDR22929.1    KZ288444    PBC25689.1    JR038305    AEY58206.1    BABH01036481    KQ976885    KYN07327.1    KQ414585    KOC70516.1    KQ977259    KYN04595.1    ODYU01001366    SOQ37440.1    GAIX01012265    JAA80295.1    NEVH01001354    PNF42897.1    KPI95923.1    KK852530    KDR21906.1    RSAL01000360    RVE42197.1    RSAL01000974    RVE41008.1    RSAL01000027    RVE51971.1    ODYU01001220    SOQ37134.1    JTDY01000842    KOB75696.1    GL449663    EFN82259.1    KQ980905    KYN11533.1    KK107403    EZA51300.1    KQ459762    KPJ20130.1    ADTU01001734    GL437348    EFN70576.1    QOIP01000011    RLU16525.1    NWSH01000100    PCG79572.1    KQ460313    KPJ16063.1    KPI95914.1    PCG79564.1    PCG79571.1    GGMR01005981    MBY18600.1    PCG79570.1    KQ982639    KYQ53259.1    KQ979657    KYN19975.1    AGBW02014542    OWR41475.1    KYN19974.1    SOQ37441.1    BABH01039623    DS232756    EDS45429.1    GL888375    EGI62034.1    EDS45428.1    KQ459193    KPJ03081.1    EDS45427.1    ADTU01007112    KQ434870    KZC09576.1    NWSH01003151    PCG66855.1    PCG66854.1    KZ149964    PZC76264.1    RSAL01000186    RVE44804.1    KDR22927.1    AJVK01033896    AGBW02010973    OWR47451.1    KPJ16073.1    GAPW01001000    JAC12598.1    KQ981523    KYN40281.1    KQ460205    KPJ16878.1    JXUM01021216    KQ560594    KXJ81736.1    GFXV01000117    MBW11922.1    AJVK01021828    KQ460325    KPJ15840.1    JTDY01000245    KOB78076.1    CH477563    EAT38951.1    KPJ03083.1    KPJ03082.1    EGI62033.1    ODYU01000079    SOQ34232.1    GFDF01009227    JAV04857.1    JTDY01005496    KOB66937.1    GFDF01009228    JAV04856.1    NWSH01002815    PCG67489.1    GEZM01101932    JAV52200.1    ODYU01002336    SOQ39701.1    KPJ16069.1    GEZM01101933    JAV52199.1    RVE44802.1    PYGN01000379    PSN47342.1   
Pfam
PF00083   Sugar_tr        + More
PF07690   MFS_1
PF14497   GST_C_3
Interpro
IPR005828   MFS_sugar_transport-like        + More
IPR020846   MFS_dom       
IPR036259   MFS_trans_sf       
IPR011701   MFS       
IPR005829   Sugar_transporter_CS       
IPR036282   Glutathione-S-Trfase_C_sf       
IPR036249   Thioredoxin-like_sf       
IPR004046   GST_C       
IPR004045   Glutathione_S-Trfase_N       
IPR040079   Glutathione_S-Trfase       
IPR010987   Glutathione-S-Trfase_C-like       
SUPFAM
SSF103473   SSF103473        + More
SSF52833   SSF52833       
SSF47616   SSF47616       

Ontologies

Topology

Length:
238
Number of predicted TMHs:
6
Exp number of AAs in TMHs:
119.81664
Exp number, first 60 AAs:
18.50995
Total prob of N-in:
0.89866
POSSIBLE N-term signal
sequence
inside
1  -  40
TMhelix
41  -  60
outside
61  -  69
TMhelix
70  -  91
inside
92  -  97
TMhelix
98  -  118
outside
119  -  127
TMhelix
128  -  150
inside
151  -  156
TMhelix
157  -  179
outside
180  -  182
TMhelix
183  -  205
inside
206  -  238
 
 

Population Genetic Test Statistics

Pi
306.096136
Theta
161.181602
Tajima's D
1.249615
CLR
285.683751
CSRT
0.726163691815409
Interpretation
Uncertain

Multiple alignment of Orthologues

 
 

Gene Tree

 
 
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