SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO09932  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA013245
Annotation
PREDICTED:_ectonucleoside_triphosphate_diphosphohydrolase_5_isoform_X1_[Bombyx_mori]
Location in the cell
Mitochondrial   Reliability : 2.01
 

Sequence

CDS
ATGGAAATTCGTCAAAGAAAGTTAAAAGATGATGTCCCCTCAACCCAAACTCATATTCGAAGCAGAGGTATAAAACAGCCAAGGCGTCTGAAGAAAGTATTCATTCTTTTGATTGTTTTGGCACTAGTCATAACATATTTATTGGGTCTGTTCGCCGGCCAATCACAATGGCTCGATAGCATCGCCAAGACCCTCGGCTACCAGAGCGAGTACCATTACGCTGTGATAATCGACGCTGGTTCGTCGGGAAGTCGGGTACTCGCTTATAAATTCAGAGTTCCTTTTACAGTATTCAGTCAAGCCAACCTAGACTTAGTTCAAGAGCACTTTGAGCAGTCCAAACCTGGGCTGTCATCGTTTGCTGATGATCCAGCAAAGGGGGCAGAGACAATAGTGCAATTAATAAAAAAGGCGGAATACTTGATACCGTTGGAGAAGAGGAAATCGACCCCCCTCATAGTACGAGCCACGGCCGGCCTGAGGCTGTTGCCTGCGGACCGCGCCGAGCAGCTCCTCGCACACGTCAAGAAGGCCATTTCCGTTCTGGGCTACGATGTTGGTCCGAACAGCGTGGACATCATGGACGGCGCGGACGAGGGCATCTACATATGGTACACGGTCAACTTGCTGCATAATCTTATCGAGGGCGAGACGATGGCAGCCCTGGACCTGGGCGGCGGCTCCACGCAGATCACGTTCCAGCTGGCGGAGGGCGAGCGGGCGCGCTACCCGCCGCGCGACCTGCACGTGGTGCCCGCGGGCAGCAACATCACGCTCTACACGCACAGCTACCTGGGTCTGGGGCTGCTGGCGGCTCGCTACGGGGTCCTGCTGCAGGAGGCCGGGGGGAACGACACGGGAGAGTTCAGCTCCGTCTGCGTGGAGCCCATCATCAAGGACGAGCCCTGGGTCTACGCCAACAAGCAGTACCGCGTCAGCGGAGCGCCCCGCAAGCCGGGCACGAAGCGCAAGGCGGCGTTCGAGGCGTGCCTGGAGGCGGTGAAGCAGTACCTGGACGGCGCGCTGGGCGGCGGCGGCGCGCCGGGCCCGCGCGGCAGCCTGGCCGCCATGAGCTTCTTCTACGACGTCGCCGCCGACGCCGGGATCATTGACGTGGCGCGCGGCGGCACGGGCAGCGTGGCGCAGTACTCGCGCGCGGCGCAGCGGGCGTGCTCGGCGCACAACGTGGAGCAGCCCTGGGCGTGCCTGGACCTGGTGTACGTGCTGGCGCTGCTGCACCACGCCTACAGGGTGCCGACCGAACAGCCAGTATATCTGTTCAAGAAAGTGAACGGCCACGAAGTATCCTGGGCCCTCGGCTTGGCGTACTCCACGGTGATGAACAGAATAACTACAAAATAA
Protein
MEIRQRKLKDDVPSTQTHIRSRGIKQPRRLKKVFILLIVLALVITYLLGLFAGQSQWLDSIAKTLGYQSEYHYAVIIDAGSSGSRVLAYKFRVPFTVFSQANLDLVQEHFEQSKPGLSSFADDPAKGAETIVQLIKKAEYLIPLEKRKSTPLIVRATAGLRLLPADRAEQLLAHVKKAISVLGYDVGPNSVDIMDGADEGIYIWYTVNLLHNLIEGETMAALDLGGGSTQITFQLAEGERARYPPRDLHVVPAGSNITLYTHSYLGLGLLAARYGVLLQEAGGNDTGEFSSVCVEPIIKDEPWVYANKQYRVSGAPRKPGTKRKAAFEACLEAVKQYLDGALGGGGAPGPRGSLAAMSFFYDVAADAGIIDVARGGTGSVAQYSRAAQRACSAHNVEQPWACLDLVYVLALLHHAYRVPTEQPVYLFKKVNGHEVSWALGLAYSTVMNRITTK

Summary

Similarity
Belongs to the GDA1/CD39 NTPase family.
EMBL
BABH01022720    RSAL01000158    RVE45557.1    ODYU01006846    SOQ49060.1    KQ460655    + More
KPJ12969.1    GDQN01006882    JAT84172.1    GAKP01001234    JAC57718.1    CH964214    EDW80382.2    GAMC01013232    JAB93323.1    GAKP01001233    JAC57719.1    GFDG01002039    JAV16760.1    KA649977    AFP64606.1    OUUW01000006    SPP82389.1    GFDG01002059    JAV16740.1    GDHF01024612    JAI27702.1    KRF99272.1    SPP82391.1    CP012523    ALC40008.1    CH902620    KPU72995.1    EDV30704.1    GDHF01033806    JAI18508.1    KPU72997.1    GBXI01009997    JAD04295.1    CH916368    EDW03088.1    SPP82388.1    CH479189    EDW25658.1    CH940654    KRF77982.1    CH954177    KQS70016.1    SPP82390.1    CH379061    KRT04812.1    AE014134    BT133416    AAF51181.1    AFH58713.1    EDV57549.2    AF041048    AY061134    EU852293    AAC39133.1    AAF51182.1    AAL28682.1    ACF58165.1    EDW57861.1    EAL33212.2    KRT04811.1    KQS70017.1    KPU72996.1    CM002910    KMY87777.1    CM000361    EDX03546.1    KMY87774.1    KMY87775.1    CH933807    EDW12215.1    KRG03156.1    KRT04813.1    AGB92509.1    KRF77983.1    KQS70018.1    CH480820    EDW54073.1    KRG03155.1    BT124751    ADF28792.1    CM000157    KRJ97165.1    EDW87464.2    KRJ97164.1    KMY87776.1    JRES01001277    KNC24017.1    NEVH01007830    PNF35032.1    PNF35035.1    GDRN01039809    JAI67181.1    PNF35031.1    GDRN01039808    JAI67182.1    KRJ97163.1    AXCM01000998    AXCN02000773    JXJN01004959    APCN01004232    ATLV01023416    KE525343    KFB49145.1    UFQT01000369    SSX23615.1    AAAB01008984    EAA14912.3    GANO01003020    JAB56851.1    CVRI01000055    CRL01004.1    CRL01005.1    CH477353    EAT42846.1    GGFK01005212    MBW38533.1    AJVK01011729    GGFK01005144    MBW38465.1    GGFM01001931    MBW22682.1    ADMH02001595    ETN61925.1   
Pfam
PF01150   GDA1_CD39
Interpro
IPR000407   GDA1_CD39_NTPase       
PDB
5U7W     E-value=1.06042e-28,     Score=316

Ontologies

Topology

Length:
453
Number of predicted TMHs:
1
Exp number of AAs in TMHs:
21.96241
Exp number, first 60 AAs:
21.69466
Total prob of N-in:
0.99975
POSSIBLE N-term signal
sequence
inside
1  -  32
TMhelix
33  -  55
outside
56  -  453
 
 

Population Genetic Test Statistics

Pi
316.915745
Theta
178.097764
Tajima's D
2.23664
CLR
0.246027
CSRT
0.910754462276886
Interpretation
Uncertain
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