Gene

KWMTBOMO09931

Pre Gene Modal

BGIBMGA013178

Annotation

PREDICTED:_uncharacterized_protein_CG3556_[Bombyx_mori]

Location

Bomo_Chr16(+):12324705-12419456      View in EpiBrowser

Full name

Uncharacterized protein CG3556      

Location in the cell

Mitochondrial   Reliability : 0.913

CDS

ATGGCTTATTGGGCGTTTTGTATTCTGATCTTCCTCCATACGGTCTACGGACAAACTGAGACCGAGCCACCGACCACAGCCACGACCAAATCTTCTACGACCGCCTCTCCCCCTACCAGCGTGACTTGGGAAGCAGAGACCTTGAACGAAGGTCAGGCCATTCAGAAGGCGCTGCAGTACCTCCTGAACCATCGGCAAGCGGACTGGGGCTGGGGCAACGATACTCACAACGTGATGCTCACACTTCAGCTGGCTAATAACACTGGCAAGGAGATCGAACAGCAAGGACTGGAGATGCAGCTGTCTGCCAAGCAAATGGAGATCGAGGTTTTGCTCATGATGTCGAAGCACCACGAGTCTCCGCCGCCGCTGGGTCGTCTCGCTGCCTACACCCTCGCTCTCGGCGCACTCTGCAAGGACCCTCGTTCTTTCCACGGTCGGGACCTGGTGGCCGCGCTCCTCCATCGCGAGCCTCCTCAGGACCTGGAGTTCGCGTACGCGACCCTTGCCGCCTGCTCATCGGCAGCTCACGTCCGCCGGCGGCATATCCGAAGACTGCTAGACATCGCTAATGCCGCATCGGACCACAGTCTTGATACGATTTCAATGGTTATCCTGGCTCTGCGCTGCGTGGTCCAGGACCATCGCCACCGCAGCCTCATCCATTTCGTGAGACGCCCCATGGCGGGACTGGCGCGGCAACAACATCCTGACGGGAGCTTCGGAACCCTGACCACCACCGCACTAGCTATACAAGCACTAGAGGACTCTGATAGCGGTCCCGGCGCCCACCAGCACTGGAGTCTTCCGGCGGCTCGCAAGTGGTTGCTGGAGCGTCAGGCGGCGGACGGCGGGTGGGGCGACGTGTCAGTGACGGCCGCTGCGGTGGCTGCGCTGACTCCCGCCTCGCTGGCTGCAGTCCGACCTCCGCATTGCAGCGACAAGCTCATGGATAGTCGTCACGAGCCTTTAGATAACAACGGTGGCGACGGAATCCTGAAGTTGGCTTATCAATCCGGACAGGCGATTAACGAATCCGAAGCTCGCAACGTCTCCTTCACCTACACCCTGTGGCTCGGCACTAACGTTACTGAGAACTTCACTTTGCAAATGGTCGCTCCGAGGAACGTGTCCTTCTACCGCGTGATGCAAATGGCCGCTGAACAGAACCCGAAATTCAAGTTCGAAGCCAGCGAATGGCCGAACGGTCACTACGTGCACACTCTAGCCGGGCACAAGGAGGAGCCAATGGGCTACCACTACTGGTTGCTGTACCGTCTCCCCGATGCCCCGGACCCCACCAGCCCCCCCGGAAACCAACTGGTCGCTCCTGTTGGTGTTGACGATCTGCTGGTGGAAGACGGAGAGCATTACCTGTTCTGGTACAAGAAGCTGTAA

Protein

MAYWAFCILIFLHTVYGQTETEPPTTATTKSSTTASPPTSVTWEAETLNEGQAIQKALQYLLNHRQADWGWGNDTHNVMLTLQLANNTGKEIEQQGLEMQLSAKQMEIEVLLMMSKHHESPPPLGRLAAYTLALGALCKDPRSFHGRDLVAALLHREPPQDLEFAYATLAACSSAAHVRRRHIRRLLDIANAASDHSLDTISMVILALRCVVQDHRHRSLIHFVRRPMAGLARQQHPDGSFGTLTTTALAIQALEDSDSGPGAHQHWSLPAARKWLLERQAADGGWGDVSVTAAAVAALTPASLAAVRPPHCSDKLMDSRHEPLDNNGGDGILKLAYQSGQAINESEARNVSFTYTLWLGTNVTENFTLQMVAPRNVSFYRVMQMAAEQNPKFKFEASEWPNGHYVHTLAGHKEEPMGYHYWLLYRLPDAPDPTSPPGNQLVAPVGVDDLLVEDGEHYLFWYKKL

Keywords

Complete proteome   Glycoprotein   Reference proteome   RNA editing   Secreted   Signal  

Feature

chain  Uncharacterized protein CG3556

Uniprot

A0A194PRC3   A0A0N1PGG1   A0A212FJ11   A0A2A4J1I5   A0A3S2L7C6   A0A2H1W7F9   + More
H9JUG5   A0A1Y1NBA8   A0A1I8NZQ9   B4Q054   B3NU33   B4I0Y9   N6TJH0   W8BD13   M9NGQ5   Q9W4K2   B4R4I2   A0A034VTM0   D2A5I5   W8ASR7   A0A1W4UPS2   J3JXG6   A0A0K8VMR5   A0A0K8VDQ7   B4L5S3   A0A0L0CRL7   B5DKZ5   B4M7B2   B3MXF1   T1PCK4   B4JKC2   B4NQ93   A0A1I8MXM0   A0A0A1X5B6   A0A3B0K7K2   A0A1A9W8U8   A0A1B0FJY2   A0A1A9ZGP0   A0A1A9XBY1   A0A0M4ESR8   A0A0T6B867   B4GTB9   A0A087ZP50   A0A2J7QUQ2   A0A0N0U5L4   A0A067QKF6   A0A2A3EQB5   W8ANU8   E2BYL3   A0A1J1IYT2   A0A182U7V1   A0A026WU51   Q7Q2M9   A0A1S4GMN7   A0A182R2T4   A0A182LI97   A0A182WTK3   A0A182M2A5   A0A182VEJ7   A0A182WAT2   A0A182PNF3   A0A1W7R7K4   A0A1B0B8B3   A0A182NN82   A0A182QYC1   A0A182HX02   A0A084VZV3   A0A151JYR1   A0A182FLT1   A0A158NW34   A0A1B6DUD9   A0A2J7QUP4   U4UGZ7   A0A195CTR5   Q17Q05   A0A182GEM7   A0A195E2W9   K7J9S4   J9JWD9   A0A182JZ21   A0A2P8Z8T9   A0A2S2R924   B0W0S2   F4X2E3   A0A1B0DKQ0   E9G922   A0A0P5Z7R4   A0A151I107   A0A0P6JXC7  

Pubmed

26354079    22118469    19121390    28004739    17994087    17550304    + More
23537049    24495485    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    17018572    25348373    18362917    19820115    22516182    26108605    15632085    25315136    25830018    24845553    20798317    24508170    30249741    12364791    20966253    24438588    21347285    17510324    26483478    20075255    29403074    21719571    21292972   

EMBL

KQ459595    KPI96001.1    KQ460652    KPJ12972.1    AGBW02008320    OWR53737.1    + More
NWSH01003876    PCG65729.1    RSAL01000105    RVE47343.1    ODYU01006814    SOQ49010.1    BABH01022724    BABH01022725    BABH01022726    GEZM01010674    JAV93925.1    CM000162    EDX01206.1    CH954180    EDV45809.1    CH480819    EDW53170.1    APGK01035501    KB740926    ENN78018.1    GAMC01018871    GAMC01018870    GAMC01018869    GAMC01018867    GAMC01018866    JAB87684.1    AE014298    AFH07243.1    AY069152    BT044343    AAF45949.1    AAL39297.1    CM000366    EDX17072.1    GAKP01013163    JAC45789.1    KQ971345    EFA05377.1    GAMC01018872    JAB87683.1    BT127935    AEE62897.1    GDHF01012171    JAI40143.1    GDHF01029656    GDHF01024652    GDHF01015306    GDHF01000401    JAI22658.1    JAI27662.1    JAI37008.1    JAI51913.1    CH933811    EDW06532.2    JRES01000104    KNC34084.1    CH379063    EDY72195.1    CH940653    EDW62679.2    CH902630    EDV38416.1    KA645683    AFP60312.1    CH916370    EDW00025.1    CH964291    EDW86318.2    GBXI01008449    JAD05843.1    OUUW01000019    SPP89303.1    CCAG010009169    CP012528    ALC48438.1    LJIG01009202    KRT83551.1    CH479190    EDW25789.1    NEVH01010491    PNF32304.1    KQ435784    KOX74544.1    KK853235    KDR09560.1    KZ288204    PBC33329.1    GAMC01018868    JAB87687.1    GL451493    EFN79218.1    CVRI01000064    CRL05373.1    KK107105    QOIP01000011    EZA59518.1    RLU16587.1    AAAB01008968    EAA13219.2    AXCM01007296    GEHC01000535    JAV47110.1    JXJN01009888    AXCN02001897    APCN01006858    ATLV01018966    KE525256    KFB43497.1    KQ981477    KYN41445.1    ADTU01027799    ADTU01027800    GEDC01008010    JAS29288.1    PNF32303.1    KB632191    ERL89846.1    KQ977329    KYN03524.1    CH477188    EAT48789.1    JXUM01058177    KQ561990    KXJ76978.1    KQ979701    KYN19510.1    AAZX01009398    ABLF02026356    PYGN01000144    PSN52915.1    GGMS01016669    MBY85872.1    DS231818    EDS41374.1    GL888578    EGI59368.1    AJVK01035680    GL732535    EFX84173.1    GDIP01047896    LRGB01002451    JAM55819.1    KZS07624.1    KQ976606    KYM79327.1    GDIQ01004674    JAN90063.1   

Proteomes

UP000053268    UP000053240    UP000007151    UP000218220    UP000283053    UP000005204    + More
UP000095300    UP000002282    UP000008711    UP000001292    UP000019118    UP000000803    UP000000304    UP000007266    UP000192221    UP000009192    UP000037069    UP000001819    UP000008792    UP000007801    UP000001070    UP000007798    UP000095301    UP000268350    UP000091820    UP000092444    UP000092445    UP000092443    UP000092553    UP000008744    UP000005203    UP000235965    UP000053105    UP000027135    UP000242457    UP000008237    UP000183832    UP000075902    UP000053097    UP000279307    UP000007062    UP000075900    UP000075882    UP000076407    UP000075883    UP000075903    UP000075920    UP000075885    UP000092460    UP000075884    UP000075886    UP000075840    UP000030765    UP000078541    UP000069272    UP000005205    UP000030742    UP000078542    UP000008820    UP000069940    UP000249989    UP000078492    UP000002358    UP000007819    UP000075881    UP000245037    UP000002320    UP000007755    UP000092462    UP000000305    UP000076858    UP000078540   

PRIDE

H9JUG5    M9NGQ5    Q9W4K2   

Pfam

PF00432   Prenyltrans        + More
PF01122   Cobalamin_bind
PF16350   FAO_M
PF11078   Optomotor-blind
PF01571   GCV_T
PF00907   T-box

Interpro

IPR008930   Terpenoid_cyclase/PrenylTrfase        + More
IPR002157   Cbl-bd_prot       
IPR001330   PFTB_repeat       
IPR032503   FAO_M       
IPR021101   Optomoror-blind_N       
IPR027266   TrmE/GcvT_dom1       
IPR006222   GCV_T_N       
IPR001699   TF_T-box       
IPR036188   FAD/NAD-bd_sf       
IPR008967   p53-like_TF_DNA-bd       
IPR036960   T-box_sf       
IPR018186   TF_T-box_CS       

SUPFAM

SSF48239   SSF48239        + More
SSF49417   SSF49417       

Gene 3D

2.60.40.820     3.30.1360.120     3.50.50.60    

CDD

cd00182  TBOX

ProteinModelPortal

A0A194PRC3   A0A0N1PGG1   A0A212FJ11   A0A2A4J1I5   A0A3S2L7C6   A0A2H1W7F9   + More
H9JUG5   A0A1Y1NBA8   A0A1I8NZQ9   B4Q054   B3NU33   B4I0Y9   N6TJH0   W8BD13   M9NGQ5   Q9W4K2   B4R4I2   A0A034VTM0   D2A5I5   W8ASR7   A0A1W4UPS2   J3JXG6   A0A0K8VMR5   A0A0K8VDQ7   B4L5S3   A0A0L0CRL7   B5DKZ5   B4M7B2   B3MXF1   T1PCK4   B4JKC2   B4NQ93   A0A1I8MXM0   A0A0A1X5B6   A0A3B0K7K2   A0A1A9W8U8   A0A1B0FJY2   A0A1A9ZGP0   A0A1A9XBY1   A0A0M4ESR8   A0A0T6B867   B4GTB9   A0A087ZP50   A0A2J7QUQ2   A0A0N0U5L4   A0A067QKF6   A0A2A3EQB5   W8ANU8   E2BYL3   A0A1J1IYT2   A0A182U7V1   A0A026WU51   Q7Q2M9   A0A1S4GMN7   A0A182R2T4   A0A182LI97   A0A182WTK3   A0A182M2A5   A0A182VEJ7   A0A182WAT2   A0A182PNF3   A0A1W7R7K4   A0A1B0B8B3   A0A182NN82   A0A182QYC1   A0A182HX02   A0A084VZV3   A0A151JYR1   A0A182FLT1   A0A158NW34   A0A1B6DUD9   A0A2J7QUP4   U4UGZ7   A0A195CTR5   Q17Q05   A0A182GEM7   A0A195E2W9   K7J9S4   J9JWD9   A0A182JZ21   A0A2P8Z8T9   A0A2S2R924   B0W0S2   F4X2E3   A0A1B0DKQ0   E9G922   A0A0P5Z7R4   A0A151I107   A0A0P6JXC7  

KEGG

101739811    K14615 gastric intrinsic factor | (RefSeq) uncharacterized protein CG3556

GO

GO:0031419   GO:0015889   GO:0003824   GO:0005576   GO:0016021   GO:0003677   GO:0005634   GO:0003700   GO:0008270   GO:0004222   GO:0005978   GO:0006468   GO:0004672   GO:0030677   GO:0016155  

PANTHER

PTHR11267  

Subcellular location

Secreted  
Nucleus  

SignalP

Position:   1 - 17,         Likelihood:  0.995564

 

 

Length:

465

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.21291

Exp number, first 60 AAs:

0.14017

Total prob of N-in:

0.01043

outside

1  -  465

 

 

Pi

265.411279

Theta

163.207828

Tajima's D

1.926358

CLR

0.326312

CSRT

0.868806559672016

Interpretation

Uncertain