SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO09925
Annotation
PREDICTED:_astacin-like_[Papilio_xuthus]
Full name
Metalloendopeptidase      
Location in the cell
Extracellular   Reliability : 1.019 Lysosomal   Reliability : 1.617
 

Sequence

CDS
ATGCTGTGGCGCTGTGGCGATGCTGTGGCGCTGTGGTCGGAGTCGTCGCTTATGAACCCAGAGGAAGTGGGGGGTTACGTCGAAGGCGACATCCTGTTGTCGTCCTCGCGGGCCAGGAATGGCGTCAAGGATCAATCGTTCTTATGGCCAAAGGGACACATTCCTTATTTAATCGATGGATATTTCAACTCTGAACAACGCGAAACTATCATGAAGGCCATCGCTGATTACCACCGGCTAACTTGTCTGCGCTTCGTTCCCTACACCGGCCAGCAAGACTACATCGTTATTCAAAGCAAGAACACGGGCTGCTGGTCCAGCGTTGGAAGGATGGGTGGACGTCAGGAAGTGAATCTGCAGGTCCCTGGGTGCGTCAGTAAGAAGGGCACGGTGCTTCACGAACTTCTTCACGCGATCGGCTTCATGCACGAGCAGAGTCGGCCAGAAAGAGATGACTTTGTCTATGTCCATTACAACAACATTAAGCCGGGCTCGGAAGGTAACTTCAGGAAGGCTGACACGAAGAGCTCCCACGGGTATGGCGTGCCGTATGACTACAATAGCGTTATGCACTATTCTGAGTACGCTTTCTCGAAGAATTCGCAGAAGACCATCACTCCTAAGGTGAGCAGCGCCAAGCTCGGACAGAGGGAGGGACTCAGTCGGGGCGACGTCAGAAAAGTTAACAACATGTACAACTGCAAGAAAGAAGAACCCCAAACCGGCTGGCTCGGCGGAATCTTCCAGAACATATTCGGAAAACCAAAGAACTATATAAGTTCGTTTTACTACTAG
Protein
MLWRCGDAVALWSESSLMNPEEVGGYVEGDILLSSSRARNGVKDQSFLWPKGHIPYLIDGYFNSEQRETIMKAIADYHRLTCLRFVPYTGQQDYIVIQSKNTGCWSSVGRMGGRQEVNLQVPGCVSKKGTVLHELLHAIGFMHEQSRPERDDFVYVHYNNIKPGSEGNFRKADTKSSHGYGVPYDYNSVMHYSEYAFSKNSQKTITPKVSSAKLGQREGLSRGDVRKVNNMYNCKKEEPQTGWLGGIFQNIFGKPKNYISSFYY

Summary

Cofactor
Zn(2+)
Feature
chain  Metalloendopeptidase
EC Number
3.4.24.-
EMBL
KZ150106    PZC73406.1    NWSH01001428    PCG71265.1    RSAL01000008    RVE53981.1    + More
ODYU01001605    SOQ38058.1    KQ459595    KPI96003.1    ODYU01001604    SOQ38055.1    AGBW02007655    OWR54819.1    BABH01022733    BABH01022734    BABH01022735    BABH01022736    KQ460323    KPJ15947.1    JTDY01005016    KOB67471.1    ABLF02035248    ABLF02035256    ABLF02035266    GGMS01012067    MBY81270.1    GGMR01004502    MBY17121.1    GFXV01003555    MBW15360.1    GFXV01005194    MBW16999.1    ACPB03002186    GECZ01023971    GECZ01006953    GECZ01001772    GECZ01000694    JAS45798.1    JAS62816.1    JAS67997.1    JAS69075.1    KQ434893    KZC10613.1    KK107522    QOIP01000001    EZA49346.1    RLU26591.1    GL448558    EFN84176.1    GEDC01025094    JAS12204.1    KQ760241    OAD61291.1    KQ414731    KOC62386.1    KQ435750    KOX76350.1    ADTU01002979    GL888262    EGI63656.1    KOC62385.1    NEVH01017447    PNF24402.1    GBHO01011880    GBHO01011879    GDHC01002504    JAG31724.1    JAG31725.1    JAQ16125.1    GL766449    EFZ15307.1    KQ977586    KYN01688.1    KQ979074    KYN22853.1    KQ976434    KYM87198.1    NNAY01000667    OXU27095.1    CP012526    ALC46020.1    KQ982651    KYQ52833.1    KQ981799    KYN35697.1    CH933806    EDW14637.1    LBMM01002471    KMQ94789.1    DS232010    EDS31597.1    GEDC01030817    JAS06481.1    CH940650    EDW67827.1    CH902617    EDV42498.1    KZ288227    PBC31795.1    CH479179    EDW25088.1    EDW14635.1    CH964232    EDW80524.1    PBC31796.1    KQ971345    EFA05101.1    JRES01001160    KNC24979.1    OUUW01000005    SPP80139.1    CH916369    EDV93001.1    CM000070    EAL27484.2    CH477283    EAT44806.1    APGK01036673    KB740941    KB632225    ENN77625.1    ERL90251.1    AJWK01013111    GAKP01000931    JAC58021.1    UFQS01000154    UFQT01000154    SSX00565.1    SSX20945.1    EDV93000.1    GEDC01020255    JAS17043.1    CM000160    EDW98121.1    UFQS01001132    UFQT01001132    SSX09160.1    SSX29070.1    CH480815    EDW43314.1    CH954182    EDV54028.1    GDHF01018612    JAI33702.1    EAL28288.3    AE014297    AY075469    AAF56122.1    AAL68281.1    CH479182    EDW33957.1    PYGN01001002    PSN38583.1    EDW67828.1    GBXI01011021    JAD03271.1    GL441691    EFN64443.1    CM000364    EDX14041.1    CH902661    EDV33999.2    JXJN01004133    AJVK01003252    CH964251    EDW83413.2    ATLV01021318    KE525316    KFB46306.1    KNC25042.1    EDW98968.1    CCAG010019892   
Pfam
PF01400   Astacin        + More
PF07202   Tcp10_C
PF13181   TPR_8
Interpro
IPR024079   MetalloPept_cat_dom_sf        + More
IPR006026   Peptidase_Metallo       
IPR001506   Peptidase_M12A       
IPR034035   Astacin-like_dom       
IPR010916   TonB_box_CS       
IPR009852   Tcp10_C_dom       
IPR002160   Prot_inh_Kunz-lg       
IPR013026   TPR-contain_dom       
IPR019734   TPR_repeat       
IPR011990   TPR-like_helical_dom_sf       
SUPFAM
SSF48452   SSF48452       
Gene 3D
PDB
3LQB     E-value=3.56867e-40,     Score=412

Ontologies

Topology

Length:
264
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00219
Exp number, first 60 AAs:
0.00045
Total prob of N-in:
0.05235
outside
1  -  264
 
 

Population Genetic Test Statistics

Pi
122.945569
Theta
132.289547
Tajima's D
-0.365378
CLR
0.121349
CSRT
0.276386180690965
Interpretation
Uncertain
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