Silkworm Genome Informatics Database

Gene

KWMTBOMO09918 Validated by peptides from experiments

Pre Gene Modal

BGIBMGA013250

Annotation

PREDICTED:_myotubularin-related_protein_3_[Bombyx_mori]

Location

Bomo_Chr16(-):12040443-12086463 View in EpiBrowser

Location in the cell

Nuclear Reliability : 2.314

CDS

ATGCTGATCAATACGTTTTTGGACACGGAGGATTTCGTGCACCTGTATTACGCCGAGGATGAGGGTACAGCGCAGGGGTGCGGGGCCGGGGCGCGTATGGCCTCCAAGTACCCTGCAGCCAGGCCGCCTTCTCCAGAATATTCACAGGTGACAGCGTCGTCGAGCGAGATGGGTGAGCGGGAGCGTTACCGCGCCCCGCCGGAGCCTCCGCCGCGACGAGCCGCCGACCTCTTCCCGCGGCACCGCACGCACTACGACGAGCCCGACCTCGACGCCGGCTTCTCGCCCATCCCCGGCGAGTTCGTGCAGTGGGTCAGTAGAACGGCAGATGGCGGCACTATCGCCATGTCGAACTACAGATTACACGCTCAGCCGAGACGCCGACACGGACCCGGCTCGTCCGTTCCCTTGCGTCTCATCGATGCTTTGGAGATTCGGGATATACAGCATCTGATCATTCTTTGCAAGAATGGTGGCCAATTGAAATGTACGTTCAACACCGGTGATCAGTGTCTGGAGTGGTGGCGCCGGCTGTCAACAGCCGCACTCTCGCCCCTGACTTCCATCCAGGACACTTTCGCTGCTGCTTACGCCGCCTGGGCTAAGGAGCAGCCCAAGTCGTCCGTGCACCGAGCTTTGATCGACGATTCCATGGCAACCCAGCGACACTGGTTCACGATCGAAATGGAACGTTTAGGCTTCACAGAAAAGGGTGCTTGGCGCGTAACATCTGTCAACTCCGAGTTCAAGCTCTGCCCCTCGTATCCGCCTTTACTCGTGGTGCCTGCGTCCATCGGTGATGAAGATTTGGACTCTGTCGCTAGGTTCCGTGCGATGCGTCGCATCCCGGCCGTGGTGTGGCGGCACGCGGGCACGGGCGCGGTGATCGCGCGCTCGTCGCAGCCCGAGGTGGGCTGGCTGGGCTGGCGCTCGGCGGAGGACGAGCGGCTGCTGGCGGCCTTCGTGTCCTCGTGCGCGGCCGACCGCGGCGCCACCAAGCTCAACAACCTGCTCATCGTCGACGCCAGGTCCTACGCCTCCGCCGTCACCAACAGAGCGCGCGGCGGCGGCTGCGAGTGCGCCCAGTACTACCCGCTGGCGGACATACAGTTCATGTGCCTGCCCAACATACACCACGTGCGGAGGAGCTTCCAACAGCTTCGGGCGCTGGCCGCCGAGCCCGCGGACCCGGCCAACTGGCACAGCGGCGTGGAGCGCACGCTGTGGCTGCAGTACCTGGCGGGGCTGGGGCGCGCGGCGGCGGGCGTGTGCCGCGCGGTGGCGGCGGGCCGGCCCGTGCTGGTGCACTGCTCGGACGGCTGGGACCGCACGCCGCAGATCGTCGCCACCGCGCAGATCATGCTGGACCCCTTCTACCGCACCATCGACGGCTTCCGGGTTCTGGTGGAGCGCGAGTGGCTGGACTTCGGGCACAAGTTCTCTGAGCGCTGCGGCCACCAGTTCGGACCCGAGGACCCCAACGAGCGCTCGCCGGTGTTCCTGCAGTGGCTCGACCTCGTGCACCAGCTGCAGCGGCAGTTCCCCTGCAGCTTCCAGTTCAACGAAGCCTTCCTGATAAAGCTGGCGACGCACGTGCACTCGTGCATGTTCGGCACGTTCCTGTGCGCCAGCGCGCGGGAGCGGCGCGCGGCGGGGCGGGGCGCGGCGTGCGTGTGGAGCCTGCTGCGCGCGCCCGCCTACTGCAACCCGCTGTACGCGCCCGCGCCGCGCCCCGACCTGTGGCCCGACTACACCGTGCGCTCGCTGCGCCTGTGGGAGGGCGTGTTCGGCGCGCCCGCCCCGCCGCCCCCCGCGCCGCCCGCCGCGCCCCATGTGGTGCCGGCCACCATGACGAAGACCCGCTCGTGCGACGACCTGCTGGGCGAGTGCGAGAAGCGGACGGCGCAGCGCCGCTGCAGCGACCCCAGCCTCGCGCCCGACCTCATGAAACTATCTCGGGTCGTCAAAGAGAACAGCGCCCTGACCGACAGCTGTGTGGAGAGACTGGCTGACCTGGACGACGCCGCCCAGCAGCACGACCAGGTGGACGGCGCGCCAGACGAAGAGCCGGCGCGGGGGATTGGCGCCGGGCGAGGGGACGGCGCCGGGCTCGCGGTCGGCACGGTAACGTCACTTAGTACAATCCAGCCCAATGTTCATCTGTGCTACGGGTGGGAGGTGGGAGGGGGACCATCGCGGGGGGGCGCGTGGGGGGGGTCGCACGCGCAGGCGCATGCTCGTGAGTTGACGGAGGTGGTGGTGCAGGTGACGGCGTGCGCGGGCGCGGAGGCGGAGGCGGAGGCGGCGGCGGGCTCCCCGGAGGAGGCGCCGGTGTTCCTGTGCGACAACTACAGCGACGTGCTGGCGCTCGGAGACGCGAGCCGCGAGGGGGGCCGCACCCGCCACATCAGCATCACGTGGCGCTCCGTGTCCGAGTCCAGCACGCACTCCTCCAGCCCCACCGACACCGCGCCCTCTGCCGCGCTACCGGCTGACCTCAACGTCGACCTCAATGCAGACCTCAATGTCGACCTCAATGCAGACATCAACAGCGATCTCAATGTAGACCTCAACGCTGATGTCGATCCTGCTCACAATGTACAGGAAGTCACCGCCAAATTTCTCGAAGTCGAACTTAACGGCGGCGCGGCGTGGAGCAGCGGCAGCTCGTCCAGCTCGTGCGAGGGGGAGAGGCGCGGCGCCTCGCAGGCCACGCTGTGTCCCCGCCCGCGCCGGCCCCCCACCGATTGTTCAGGCGCGTCGACGTCCTGGTGGGACGCGGCGGAGCCCCCGGACGGGCTGCCCCTCGCGCTCGACCCGCTGCAGGAGCGGCTGCACCAGATCATTACACATCAAAAGAAAGTGGTTGAGGACTTGACGGGGCAGCTCCGCGAGTGTCGCGAGGCGCTGCGCCGCGCCTCCCCGCCGCCCGCGCCCCCCGCGCCACGCCCCCCACCGCCCGTCGCGCCGCCGTCGTCGAGCAGCAGCCGCAGCAGCCGGAGCAGCGGCAGCGGGTCGGCGTCCGAGGTGGAGGTGGGTGAGGAAGCGCGCGGCGTCACGTGGCTGCCCGACAGTGCGGCGCCGCGCTGCCAGCACTGCCACCACCACTTCTGGCTCGCTAGGAGGCGCCACCACTGCAGACGGTGCGGTGGGATATTCTGCGGGTCGTGTGCCGAGCTGAGCCCGTGGGGGTCGCGGGGGCACGTGCGCATGTGCGCCCCCTGCCGCGCCCGGTGA

Protein

MLINTFLDTEDFVHLYYAEDEGTAQGCGAGARMASKYPAARPPSPEYSQVTASSSEMGERERYRAPPEPPPRRAADLFPRHRTHYDEPDLDAGFSPIPGEFVQWVSRTADGGTIAMSNYRLHAQPRRRHGPGSSVPLRLIDALEIRDIQHLIILCKNGGQLKCTFNTGDQCLEWWRRLSTAALSPLTSIQDTFAAAYAAWAKEQPKSSVHRALIDDSMATQRHWFTIEMERLGFTEKGAWRVTSVNSEFKLCPSYPPLLVVPASIGDEDLDSVARFRAMRRIPAVVWRHAGTGAVIARSSQPEVGWLGWRSAEDERLLAAFVSSCAADRGATKLNNLLIVDARSYASAVTNRARGGGCECAQYYPLADIQFMCLPNIHHVRRSFQQLRALAAEPADPANWHSGVERTLWLQYLAGLGRAAAGVCRAVAAGRPVLVHCSDGWDRTPQIVATAQIMLDPFYRTIDGFRVLVEREWLDFGHKFSERCGHQFGPEDPNERSPVFLQWLDLVHQLQRQFPCSFQFNEAFLIKLATHVHSCMFGTFLCASARERRAAGRGAACVWSLLRAPAYCNPLYAPAPRPDLWPDYTVRSLRLWEGVFGAPAPPPPAPPAAPHVVPATMTKTRSCDDLLGECEKRTAQRRCSDPSLAPDLMKLSRVVKENSALTDSCVERLADLDDAAQQHDQVDGAPDEEPARGIGAGRGDGAGLAVGTVTSLSTIQPNVHLCYGWEVGGGPSRGGAWGGSHAQAHARELTEVVVQVTACAGAEAEAEAAAGSPEEAPVFLCDNYSDVLALGDASREGGRTRHISITWRSVSESSTHSSSPTDTAPSAALPADLNVDLNADLNVDLNADINSDLNVDLNADVDPAHNVQEVTAKFLEVELNGGAAWSSGSSSSSCEGERRGASQATLCPRPRRPPTDCSGASTSWWDAAEPPDGLPLALDPLQERLHQIITHQKKVVEDLTGQLRECREALRRASPPPAPPAPRPPPPVAPPSSSSSRSSRSSGSGSASEVEVGEEARGVTWLPDSAAPRCQHCHHHFWLARRRHHCRRCGGIFCGSCAELSPWGSRGHVRMCAPCRAR

Uniprot

NA

ProteinModelPortal

NA

PDB

1ZVR E-value=1.04353e-76, Score=734

KEGG

101740354 K18082 myotubularin-related protein 3/4 [EC:3.1.3.48 3.1.3.64 3.1.3.95] | (RefSeq) myotubularin-rela

PATHWAY

00562    Inositol phosphate metabolism - Bombyx mori (domestic silkworm)
01100    Metabolic pathways - Bombyx mori (domestic silkworm)
04070    Phosphatidylinositol signaling system - Bombyx mori (domestic silkworm)
04140    Autophagy - animal - Bombyx mori (domestic silkworm)

GO

GO:0046872 GO:0004725 GO:0016311 GO:0016791 GO:0006364 GO:0006379 GO:0008033 GO:0030677 GO:0016155 GO:0003824

Length:

1078

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00436

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00005

outside

1 - 1078

Pi

240.970866

Theta

171.815415

Tajima's D

0.448694

CLR

0.702606

CSRT

0.498025098745063

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics