SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO09917  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA013170
Annotation
PREDICTED:_WSCD_family_member_AAEL009094_isoform_X1_[Bombyx_mori]
Full name
WSCD family member AAEL009094       + More
WSCD family member AGAP003962      
WSCD family member GA21586      
WSCD family member CG9164      
Sulfotransferase      
Location in the cell
Mitochondrial   Reliability : 1.915 PlasmaMembrane   Reliability : 1.788
 

Sequence

CDS
ATGTCTCGTCGTACGATATTCTTGTTCGCGGCGGCTGTCGTCATGCTGTATTTTTCAATAATCTTGTTTATGTTGAGTCCTCTACACGGTACGAAAAGTGCCTATTACGGCAACAACTATATGAATCATTTCGGCTTTCGACAAATACCCAGCGTTAACTGGTGTCATGAGTTGCGTTGGCAGTCGCCGCCTTCACCGCACGTTGTTGCCCTGGCCTCCTACCCTGGAAGCGGCAATACATGGTTCAGATATCTTCTACAGCAGGCCACAGGTATAGTCACGGGCTCTGTGTACATGGATTATGGACTTCGAGTCCATGGGTTCCCAGCTGAGAATGTGACAGATGGTTCAGTGCTGGTAGTTAAAACTCATGAAGCTCCACCTGCTCATTCTGACAAGTTTAAATCTGCAATATTACTGATAAGAAACCCAAGAGATGCGATATTGGCGGATTTTAACAGACTTCACAAGGGTCACATCGGCACTGCTCCTAAGTCGGCATTCAAACGAATATCGCACGACAAAAAAACCGAGTGGTGGTGGCACGTGCGCCGCGAGGTGGTGTCGTGGGAGGCGCTGCACAGGGCCTGGCTGGCGGGGTTCCGCGGCGCGCTGCTGGTGCTGCGCTACGAGCAGCTGGCGGAGGACCCCGGGCCGCCGCTGCAGGCCGCGCTGGCCTTCCTCAACCGCACCGTCCCGCAGGAAAGCTTGGAGTGCGCGCTGGCGAACAAGGAGGGCATTTACCGACGCCGAAACAAGCATCAGAACTTCGATCCCTTCACTCCGCAGATGTACGAGCTGCTGGACGCGGCGCAGGCCAGGGTCGCGGGGCTGGTGGCGCGCCGCACGCGTGACGTCACCACGCGCCCACCCACCCGGGCTTAA
Protein
MSRRTIFLFAAAVVMLYFSIILFMLSPLHGTKSAYYGNNYMNHFGFRQIPSVNWCHELRWQSPPSPHVVALASYPGSGNTWFRYLLQQATGIVTGSVYMDYGLRVHGFPAENVTDGSVLVVKTHEAPPAHSDKFKSAILLIRNPRDAILADFNRLHKGHIGTAPKSAFKRISHDKKTEWWWHVRREVVSWEALHRAWLAGFRGALLVLRYEQLAEDPGPPLQAALAFLNRTVPQESLECALANKEGIYRRRNKHQNFDPFTPQMYELLDAAQARVAGLVARRTRDVTTRPPTRA

Summary

Similarity
Belongs to the WSCD family.
Belongs to the sulfotransferase 1 family.
Keywords
Complete proteome   Glycoprotein   Membrane   Reference proteome   Transmembrane   Transmembrane helix   Alternative splicing  
Feature
chain  WSCD family member AAEL009094
splice variant  In isoform B.
EC Number
2.8.2.-
EMBL
BABH01022753    RSAL01000008    RVE53976.1    ODYU01001161    SOQ36983.1    KZ150106    + More
PZC73412.1    KQ460773    KPJ12441.1    NWSH01001290    PCG71836.1    KQ459602    KPI93164.1    AGBW02010783    OWR47792.1    KPJ12439.1    KPI93167.1    CH477554    GDHF01011684    GDHF01002065    JAI40630.1    JAI50249.1    GDHF01028014    GDHF01004945    JAI24300.1    JAI47369.1    GDHF01020888    JAI31426.1    KPI93166.1    ADMH02002183    ETN58003.1    DS235882    EEB20243.1    AAAB01008978    UFQS01002343    UFQT01002343    SSX13821.1    SSX33242.1    KQ971344    EFA05808.2    NEVH01003757    PNF40015.1    AXCN02000066    AXCM01003268    ATLV01012845    KE524818    KFB37029.1    JXUM01038488    KQ561167    KXJ79491.1    CH940653    EDW62868.1    CH933810    EDW06862.1    APCN01002703    GAMC01005729    JAC00827.1    AJWK01013184    CVRI01000057    CRL01941.1    KK852680    KDR18632.1    SAUD01037289    RXG52620.1    EZ423776    ADD20052.1    GEDC01014507    JAS22791.1    UFQT01002352    SSX33265.1    JRES01001702    KNC20787.1    CCAG010022534    BT126601    AEE61565.1    OUUW01000003    SPP78312.1    SPP78311.1    CH902622    EDV34298.1    KPU75063.1    CP012528    ALC49746.1    CH379064    KRT07084.1    CH479193    EDW26829.1    KB632191    ERL89847.1    CH954180    EDV47022.1    FM246434    FM246435    FM246436    FM246438    FM246439    FM246440    FM246441    FM246442    CAR94360.1    CAR94361.1    CAR94362.1    CAR94364.1    CAR94365.1    CAR94366.1    CAR94367.1    CAR94368.1    FM246433    CAR94359.1    AE014298    AY069087    AM999314    AM999315    AM999316    AM999317    AM999318    AM999319    AM999320    AM999321    AM999322    CM000162    EDX01768.1    CM000366    EDX17972.1    CH480871    EDW53833.1    FM246437    CAR94363.1    FM246431    CAR94357.1    FM246432    CAR94358.1    GECU01006713    JAT00994.1    LJIJ01000315    ODM98863.1    GDHF01021019    GDHF01013560    JAI31295.1    JAI38754.1    KB199652    ESP04709.1    NEDP02003450    OWF48649.1    AL929310    RAZU01001831    RLQ54741.1   
Pfam
PF00685   Sulfotransfer_1        + More
PF01822   WSC
Interpro
IPR000863   Sulfotransferase_dom        + More
IPR027417   P-loop_NTPase       
IPR039740   CNOT10       
IPR011990   TPR-like_helical_dom_sf       
IPR002889   WSC_carb-bd       
SUPFAM
SSF52540   SSF52540        + More
SSF48452   SSF48452       
PDB
3NIB     E-value=0.000215629,     Score=104

Ontologies

Topology

Subcellular location
Membrane  
Length:
294
Number of predicted TMHs:
1
Exp number of AAs in TMHs:
22.1329199999999
Exp number, first 60 AAs:
21.63144
Total prob of N-in:
0.98559
POSSIBLE N-term signal
sequence
inside
1  -  6
TMhelix
7  -  29
outside
30  -  294
 
 

Population Genetic Test Statistics

Pi
164.457221
Theta
196.661237
Tajima's D
-0.855147
CLR
1.691271
CSRT
0.171541422928854
Interpretation
Uncertain
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