Gene

KWMTBOMO09912  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA013168

Annotation

PREDICTED:_putative_tricarboxylate_transport_protein?_mitochondrial_[Papilio_xuthus]

Location

Bomo_Chr16(+):11962964-11981798      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 1.888

CDS

ATGTCTTCACGGCAAGGAACATTCAAAAACCCATTCTCCAGACCGTGGATGTCGGAGACAGGTGCAGCGGCTGCGGCTGGTGGTTCGGGTTCAGTAGGCTTAAAGGGAGTTGTAGCCGGCGGAATTACAGGAGGCATTGAAATTTGTATTACATTCCCAACAGAATATGTAAAAACACAACTGCAATTGGATGAAAAAGGTGGTACCAGAAAGTATAACGGTATAGCGGACTGCGTCAAGAAGACAGTGAAAGGACATGGTTTCTTCGGGCTCTATAGAGGTCTCAGCGTGTTGCTATACGGATCGATACCAAAATCTGCCGTCAGATTCGGTGTGTTCGAACAAGCCAAACTGTACATGGTTACCGACAACGGTACCCTGACGACCACCGGTAAGCTGGCCTGCGGGCTGGCTGCCGGAGTGGCCGAGGCGATCTTCGCCGTCACGCCCATGGAGACTGTGAAGGTGAAGTTTATAAACGACATGCGCCTAGAGAAGCCCAGGTTCAAAGGTTTCTTCCACGGCGTCAGGACTATTGTTAGGGAGGAAGGTGTCGGAGGTGTATACAAGGGTGTCTCGGCGACGATCATGAAGCAGGGCAGCAACCAAGCCATCAGGTTCTTCGTTATGGAGTCTCTGAGGGACTGGTACAAGGGCGGAGACAGAGATAAGCACGTCCCTAAGTACATTGTTGGACTGTTCGGTGGTATAGCTGGAGCTGCCTCGGTGTTCGGTAACACGCCCATAGATGTCGTTAAAACGCGCATGCAAGGCCTGGAGGCGGCCAAGTACAAGAACACCATTGACTGCTTCGTGAAGACCTGGAAGCACGAGGGTCCGCTCGCGTTCTACAAGGGCACCGTGCCGCGCCTCAGCAGGGTCGTGTTCGACGTGGCCATCACCTTCACCATCTACGACAGCATCATGGACGTCTTCAACTACGTGTGGAAGTAG

Protein

MSSRQGTFKNPFSRPWMSETGAAAAAGGSGSVGLKGVVAGGITGGIEICITFPTEYVKTQLQLDEKGGTRKYNGIADCVKKTVKGHGFFGLYRGLSVLLYGSIPKSAVRFGVFEQAKLYMVTDNGTLTTTGKLACGLAAGVAEAIFAVTPMETVKVKFINDMRLEKPRFKGFFHGVRTIVREEGVGGVYKGVSATIMKQGSNQAIRFFVMESLRDWYKGGDRDKHVPKYIVGLFGGIAGAASVFGNTPIDVVKTRMQGLEAAKYKNTIDCFVKTWKHEGPLAFYKGTVPRLSRVVFDVAITFTIYDSIMDVFNYVWK

Similarity

Belongs to the mitochondrial carrier (TC 2.A.29) family.

Uniprot

H9JUF5   A0A194PIM5   A0A0N0PBU9   A0A1E1W7D1   A0A212F253   A0A2A4IXA2   + More
A0A3S2PFV7   A0A2H1V868   A0A2W1BKP1   D2A623   A0A0P4W9Q4   A0A023F8E4   A0A1B2M4Y9   A0A224XTT6   A0A0P4VSU5   R4G8Q9   A0A1B0DIW7   A0A069DYM1   N6T3V2   J3JVQ9   T1I0P4   A0A1D2NMJ6   A0A1B6BX60   A0A0Q9WCK1   B0X308   B4M5D6   A0A1B6FNZ3   A0A1Q3FQS5   A0A1Q3FQV5   A0A2S2Q7N2   A0A1L8E0J1   A0A1B0BF38   A0A1Y1LQC3   A0A1B6MIE5   E0W3R0   A0A1A9X996   A0A023ENH4   A0A1Q3FQZ2   E9G4Z8   A0A1A9V644   A0A1Q3FQN7   A0A3S3S7K7   Q177Y5   J9K2V5   B4JUP8   A0A0P8Y018   A0A2P2I0B8   A0A0N7ZKV5   A0A084WE58   A0A0K8TPQ9   A0A1B6JE07   U5ERD5   B3M0Y1   A0A0P6FKT7   A0A1B6GPJ7   A0A2H8TEG7   A0A2J7QH06   V5HJN9   A0A0P6HDN9   A0A0P6ALZ4   A0A0K8TVN0   A0A182IJB6   A0A2S2NNY6   E2BIE5   A0A1E1XRL6   A0A182QN55   A0A034WPN0   T1PI73   A0A1I8MRS7   A0A132A549   A0A2M4BTN9   A0A2M4AFQ8   A0A2M4AGY5   A0A2M3Z3C2   A0A2A2KD19   T1DFJ2   D3TQR4   A0A182UX14   A0A182KWP6   A0A182UG73   A0A182HJJ6   A0A1J1ICZ7   A0A182F9E3   A0A182PUC2   W5J629   A0A182NFT9   A0A182RJ83   X1ZVF3   A0A0P4ZS12   A0A1I8Q2D6   A0A3P7ZGM2   A0A182XXA7   A0A0C9RD97   A0A182XKE8   A0A1E1XFU6   A0A2R5L7C5   B4HI14   G3MMD5   A0A2C9JI96   A0A182VXR4  

Pubmed

19121390    26354079    22118469    28756777    18362917    19820115    + More
25474469    27129103    26334808    23537049    22516182    27289101    17994087    18057021    28004739    20566863    24945155    26483478    21292972    17510324    24438588    26369729    25765539    20798317    29209593    25348373    25315136    26555130    20353571    20966253    20920257    23761445    23254933    25244985    28503490    22216098    15562597   

EMBL

BABH01022761    BABH01022762    KQ459602    KPI93172.1    KQ460773    KPJ12434.1    + More
GDQN01008154    JAT82900.1    AGBW02010783    OWR47809.1    NWSH01005088    PCG64445.1    RSAL01000051    RVE50215.1    ODYU01001161    SOQ36986.1    KZ150106    PZC73416.1    KQ971346    EFA04991.1    GDRN01060825    JAI65297.1    GBBI01001130    JAC17582.1    KX467780    AOA60276.1    GFTR01005055    JAW11371.1    GDKW01001543    JAI55052.1    GAHY01000542    JAA76968.1    AJVK01015616    AJVK01015617    AJVK01015618    GBGD01002150    JAC86739.1    APGK01053515    APGK01053516    KB741224    KB631749    ENN72303.1    ERL85764.1    BT127327    AEE62289.1    ACPB03016940    LJIJ01000004    ODN06482.1    GEDC01031426    JAS05872.1    CH940652    KRF79108.1    KRF79109.1    DS232304    EDS39510.1    EDW59847.2    GECZ01017834    JAS51935.1    GFDL01005199    JAV29846.1    GFDL01005222    JAV29823.1    GGMS01004543    MBY73746.1    GFDF01001834    JAV12250.1    JXJN01013279    GEZM01049800    JAV75843.1    GEBQ01004283    JAT35694.1    DS235882    EEB20266.1    JXUM01012312    JXUM01012313    JXUM01012314    JXUM01012315    GAPW01002641    JAC10957.1    GFDL01005182    JAV29863.1    GL732532    EFX85387.1    GFDL01005227    JAV29818.1    NCKU01002145    RWS10284.1    CH477369    EAT42472.1    ABLF02020915    CH916374    EDV91218.1    CH902617    KPU80140.1    KPU80141.1    IACF01001770    LAB67452.1    GDIP01235497    JAI87904.1    ATLV01023154    KE525341    KFB48502.1    GDAI01001497    JAI16106.1    GECU01010262    JAS97444.1    GANO01002851    JAB57020.1    EDV43210.2    GDIQ01062969    LRGB01000008    JAN31768.1    KZS21867.1    GECZ01032285    GECZ01005430    JAS37484.1    JAS64339.1    GFXV01000674    MBW12479.1    NEVH01014358    PNF27868.1    GANP01008986    JAB75482.1    GDIQ01020787    JAN73950.1    GDIP01027467    JAM76248.1    GDHF01033998    GDHF01029788    GDHF01011945    GDHF01003387    JAI18316.1    JAI22526.1    JAI40369.1    JAI48927.1    GGMR01006228    MBY18847.1    GL448504    EFN84533.1    GFAA01001486    JAU01949.1    AXCN02000244    GAKP01002353    GAKP01002351    JAC56599.1    KA647613    AFP62242.1    JXLN01010354    KPM05560.1    GGFJ01007221    MBW56362.1    GGFK01006298    MBW39619.1    GGFK01006732    MBW40053.1    GGFM01002265    MBW23016.1    LIAE01008919    PAV71773.1    GAMD01003121    JAA98469.1    EZ423766    ADD20042.1    APCN01002170    CVRI01000047    CRK98112.1    ADMH02002112    ETN58853.1    AMQN01000480    GDIP01209446    JAJ13956.1    UZAH01027194    VDO89469.1    GBYB01004916    JAG74683.1    GFAC01001217    JAT97971.1    GGLE01001234    MBY05360.1    CH480815    EDW42596.1    JO843036    AEO34653.1   

Proteomes

UP000005204    UP000053268    UP000053240    UP000007151    UP000218220    UP000283053    + More
UP000007266    UP000092462    UP000019118    UP000030742    UP000015103    UP000094527    UP000008792    UP000002320    UP000092460    UP000009046    UP000092443    UP000069940    UP000000305    UP000078200    UP000285301    UP000008820    UP000007819    UP000001070    UP000007801    UP000030765    UP000076858    UP000235965    UP000075880    UP000008237    UP000075886    UP000095301    UP000218231    UP000075903    UP000075882    UP000075902    UP000075840    UP000183832    UP000069272    UP000075885    UP000000673    UP000075884    UP000075900    UP000095300    UP000076408    UP000076407    UP000001292    UP000076420    UP000075920   

PRIDE

H9JUF5   

Pfam

PF00153   Mito_carr        + More
PF00061   Lipocalin

Interpro

IPR023395   Mt_carrier_dom_sf        + More
IPR018108   Mitochondrial_sb/sol_carrier       
IPR002067   Mit_carrier       
IPR012674   Calycin       
IPR000463   Fatty_acid-bd       
IPR000566   Lipocln_cytosolic_FA-bd_dom       

SUPFAM

SSF103506   SSF103506        + More
SSF50814   SSF50814       

Gene 3D

1.50.40.10     2.40.128.20    

ProteinModelPortal

H9JUF5   A0A194PIM5   A0A0N0PBU9   A0A1E1W7D1   A0A212F253   A0A2A4IXA2   + More
A0A3S2PFV7   A0A2H1V868   A0A2W1BKP1   D2A623   A0A0P4W9Q4   A0A023F8E4   A0A1B2M4Y9   A0A224XTT6   A0A0P4VSU5   R4G8Q9   A0A1B0DIW7   A0A069DYM1   N6T3V2   J3JVQ9   T1I0P4   A0A1D2NMJ6   A0A1B6BX60   A0A0Q9WCK1   B0X308   B4M5D6   A0A1B6FNZ3   A0A1Q3FQS5   A0A1Q3FQV5   A0A2S2Q7N2   A0A1L8E0J1   A0A1B0BF38   A0A1Y1LQC3   A0A1B6MIE5   E0W3R0   A0A1A9X996   A0A023ENH4   A0A1Q3FQZ2   E9G4Z8   A0A1A9V644   A0A1Q3FQN7   A0A3S3S7K7   Q177Y5   J9K2V5   B4JUP8   A0A0P8Y018   A0A2P2I0B8   A0A0N7ZKV5   A0A084WE58   A0A0K8TPQ9   A0A1B6JE07   U5ERD5   B3M0Y1   A0A0P6FKT7   A0A1B6GPJ7   A0A2H8TEG7   A0A2J7QH06   V5HJN9   A0A0P6HDN9   A0A0P6ALZ4   A0A0K8TVN0   A0A182IJB6   A0A2S2NNY6   E2BIE5   A0A1E1XRL6   A0A182QN55   A0A034WPN0   T1PI73   A0A1I8MRS7   A0A132A549   A0A2M4BTN9   A0A2M4AFQ8   A0A2M4AGY5   A0A2M3Z3C2   A0A2A2KD19   T1DFJ2   D3TQR4   A0A182UX14   A0A182KWP6   A0A182UG73   A0A182HJJ6   A0A1J1ICZ7   A0A182F9E3   A0A182PUC2   W5J629   A0A182NFT9   A0A182RJ83   X1ZVF3   A0A0P4ZS12   A0A1I8Q2D6   A0A3P7ZGM2   A0A182XXA7   A0A0C9RD97   A0A182XKE8   A0A1E1XFU6   A0A2R5L7C5   B4HI14   G3MMD5   A0A2C9JI96   A0A182VXR4  

PDB

2LCK     E-value=2.36376e-18,     Score=225

KEGG

101744210    K15100 solute carrier family 25 (mitochondrial citrate transporter), member 1 | (RefSeq) putative tr

GO

GO:0016021   GO:0022857   GO:0006843   GO:0008289   GO:0016006  

Length:

317

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

57.99626

Exp number, first 60 AAs:

3.6055

Total prob of N-in:

0.72891

outside

1  -  317

 

 

Pi

19.671425

Theta

23.148596

Tajima's D

-1.261722

CLR

1.698077

CSRT

0.0944452777361132

Interpretation

Uncertain