SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO09900  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA013260
Annotation
PREDICTED:_phosphatidylethanolamine_binding_protein_isoform_X1_[Bombyx_mori]
Location
Bomo_Chr16(-):11505051-11530643      View in EpiBrowser
Location in the cell
Cytoplasmic   Reliability : 2.019
 

Sequence

CDS
ATGGTCAATTTTAGGGTCTTGACCAGAGCGATGTCTACCGTAGCGAAGTCCTTCGAGGCCAGCCAAGTGGTGCCTGATGTTATACCAAAAGCGCCGGCCGCTTTATTGCAGGTGAAATACCCAAGCGGAGTCGAAGTTAAAGAAGGTAATGAGCTGACTCCAACTCAGGTGAAAGACGAGCCTTCAGTGAAATGGGACGCGGAGCCAGGACAGTACTACACTCTGGCCATGACCGACCCTGATGCGCCGTCCCGTAAAGAACCCACATTTCGCGAATGGCACCACTGGCTGGTTGGCAACATCCAGGGCAACGAGGTAAACTCCGGCGAAACTTTGTCCCAGTACGTGGGCTCTGGACCTCCGGAAAAGACAGGCCTGCACAGATACGTGTTCCTCTTGTACAAACAACCATCGAAGCTCACATTCGACGAGCCGAGACTCACTAACACTTCGAGCGACAAACGTGCCAATTTCAAAATTGCCGAGTTCGCCAAGAAGTACAACCTAGGGGATCCGATTGCGGGCAACTTCTACGAAGCGCAGTATGACGACTACGTCCCTATTCTGTACAAGCAGCTCGATGCACGTCGCTCTGGTCGCCCTATTACGGATAAAATGGATGCCATTTATGAAAAAGTGGAGCAAGATCGGCATATCGGTAGTTACGATGTAGCTGAAGAACTGGGAATTGAGCACAAAACAATTTTGGCACATTTGAAAAAAACTGGATGTGCGATTGTTTTGTTAACAGTCGCCACTATAGTCGATTTTAGGGTCTTGACCAGAGCGATGTCTACCGTAGCGAGGTCCTTCGAGGCCAGCCAAGTGGTGCCTGATGTTATACCAAAAGCGCCGGCCGCTTTGTTGCAGGTGAAATACCCAAGCGGAGTTGAAGTTGAAGAAGGCAATGAGCTGACTCCAACTCAGGTGAAAGACGAGCCTTCAGTGAAATGGGACGCGGAGCCAGGGCAGTACTACACTCTGGCCATGGTCGACCCTGACGTGCCGTCCCGTAAGCTGCCCATAAATCGTGAATTGCAACACTGGCTGGTTGGCAACATCCAGGGCAATGAGGTATGCTCCGGCGAAACTCTGTCCCAATACCTGGGCGCCGCACCTCCGATAGCGACTGGCCTGCACAGATACGTGTTCCTCTTGTACAAACAACCATCGAAGCTCACATTTGACGAGCCGAGACTCCCTAACATTTCGACCGTCAAACGAATCAATTTCAAAATTGCCGAGTTCGCCATGAAGTACAACCTAGGGGTTCCGATTGCGGGCAACTTCTTCGTGGCCCAGTTTGACGTCCCTATTCTGAACAACCAACTCGGTGTTTAA
Protein
MVNFRVLTRAMSTVAKSFEASQVVPDVIPKAPAALLQVKYPSGVEVKEGNELTPTQVKDEPSVKWDAEPGQYYTLAMTDPDAPSRKEPTFREWHHWLVGNIQGNEVNSGETLSQYVGSGPPEKTGLHRYVFLLYKQPSKLTFDEPRLTNTSSDKRANFKIAEFAKKYNLGDPIAGNFYEAQYDDYVPILYKQLDARRSGRPITDKMDAIYEKVEQDRHIGSYDVAEELGIEHKTILAHLKKTGCAIVLLTVATIVDFRVLTRAMSTVARSFEASQVVPDVIPKAPAALLQVKYPSGVEVEEGNELTPTQVKDEPSVKWDAEPGQYYTLAMVDPDVPSRKLPINRELQHWLVGNIQGNEVCSGETLSQYLGAAPPIATGLHRYVFLLYKQPSKLTFDEPRLPNISTVKRINFKIAEFAMKYNLGVPIAGNFFVAQFDVPILNNQLGV

Summary

Uniprot
A0A2H1VKW9   A0A2H1X2U3   E9IP20   A0A195E421   A0A151ILZ8   A0A151I2A4   + More
A0A151WMQ1   A0A195FTR5  
Pubmed
21282665   
EMBL
ODYU01003120    SOQ41480.1    ODYU01013000    SOQ59597.1    GL764397    EFZ17714.1    + More
KQ979701    KYN19652.1    KQ977085    KYN05899.1    KQ976551    KYM80881.1    KQ982937    KYQ49113.1    KQ981281    KYN43284.1   
Proteomes
UP000078492    UP000078542    UP000078540    UP000075809    UP000078541   
Pfam
PF01161   PBP
Interpro
IPR036610   PEBP-like_sf        + More
IPR035810   PEBP_euk       
IPR008914   PEBP       
IPR001858   Phosphatidylethanolamine-bd_CS       
SUPFAM
SSF49777   SSF49777       
Gene 3D
3.90.280.10    
CDD
cd00866  PEBP_euk
ProteinModelPortal
A0A2H1VKW9   A0A2H1X2U3   E9IP20   A0A195E421   A0A151ILZ8   A0A151I2A4   + More
A0A151WMQ1   A0A195FTR5  
PDB
5TVD     E-value=2.3353e-60,     Score=589

Ontologies

KEGG
101745023    no KO assigned | (RefSeq) protein D2-like
GO
PANTHER
PTHR11362  

Topology

Length:
446
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
1.32526
Exp number, first 60 AAs:
0.00018
Total prob of N-in:
0.04092
outside
1  -  446
 
 

Population Genetic Test Statistics

Pi
229.444079
Theta
158.020221
Tajima's D
1.8224
CLR
0.122129
CSRT
0.855907204639768
Interpretation
Uncertain

Multiple alignment of Orthologues

 
 

Gene Tree

 
 
Peptides ×
Source Sequence Identity Evalue
28556443 APAALLQVK 100.00 2e-18
26822097 IPNISTVK 96.00 6e-10
25860555 SEAQSVIEQCKDK 96.00 6e-10
24093152 YPSGVEVEEGNEITPTQVK 96.00 6e-10
27102218 WDAEPGQYYTIAMVDPDVPSR 96.00 6e-10
29197581 YPSGVEVEEGNEITPTQVK 96.00 6e-10
28556443 LTFDEPR 100.00 8e-10
25044914 WDAEPGQYYTIAMTDPDAPSR 95.45 2e-09
26822097 EIQHWIVGNIQGNEVCSGETISQYIGAAPPIATGIHR 95.45 2e-09
25860555 RGDIIDTYSQK 95.45 2e-09
24093152 WDAEPGQYYTIAMVDPDVPSR 95.45 2e-09
27102218 ITFDEPRIPNISTVK 95.45 2e-09
26822097 AGGGGGWSR 95.24 8e-09
26280517 WAVIHPACGGR 95.24 8e-09
25044914 WCVVGDENYGEGSSR 95.24 8e-09
28467696 WCVVGDENYGEGSSR 95.24 8e-09
26822097 YPSGVEVEEGNEITPTQVK 95.24 9e-09
25860555 SSSSSQGQSASSSSSDEK 95.24 9e-09
24093152 WADIAVDIAIDAVNTVTVNDNGR 95.24 9e-09
27102218 EIQHWIVGNIQGNEVCSGETISQYIGAAPPIATGIHR 95.24 9e-09
29197581 SFEASQVVPDVIPK 95.24 9e-09
28556443 EGNELTPTQVK 100.00 7e-05
28556443 EGNELTPTQVK 100.00 7e-05
28556443 SFEASQVVPDVIPK 100.00 7e-05
28556443 SFEASQVVPDVIPK 100.00 7e-05
26822097 ITFDEPR 100.00 0.013
26822097 ITFDEPR 100.00 0.013
25860555 HCYDIGK 100.00 0.013
25860555 HCYDIGK 100.00 0.013
26280517 SFDVPPPAMEK 100.00 0.013
26280517 SFDVPPPAMEK 100.00 0.013
25044914 SFDWIYEMR 100.00 0.013
25044914 SFDWIYEMR 100.00 0.013
24093152 SFDDEIDVFSVAQK 100.00 0.013
24093152 SFDDEIDVFSVAQK 100.00 0.013
27102218 APAAIIQVK 100.00 0.013
27102218 APAAIIQVK 100.00 0.013
28467696 SFEAPIK 100.00 0.013
28467696 SFEAPIK 100.00 0.013
29197581 IPNISTVK 100.00 0.013
29197581 IPNISTVK 100.00 0.013
28556443 SFEASQVVPDVIPK 100.00 0.013
28556443 SFEASQVVPDVIPK 100.00 0.013
28556443 SFEASQVVPDVIPK 100.00 0.013
28556443 SFEASQVVPDVIPK 100.00 0.013
28556443 EGNELTPTQVKDEPSVK 100.00 0.013
28556443 EGNELTPTQVKDEPSVK 100.00 0.013
28556443 EWHHWLVGNIQGNEVNSGETLSQYVGSGPPEK 100.00 0.013
28556443 EWHHWLVGNIQGNEVNSGETLSQYVGSGPPEK 100.00 0.013
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