SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO09892  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA013267
Annotation
PREDICTED:_phosphatidylethanolamine-binding_protein_homolog_F40A3.3-like_[Plutella_xylostella]
Location in the cell
Cytoplasmic   Reliability : 1.211 Extracellular   Reliability : 1.045
 

Sequence

CDS
ATGTCTTTGGTAGCACAAGCATTCGAAGCTAGCAAAATAGTGCCGGATGTTATTCCCGTCGCTCCAACTAAGAACATTGAGCTTAAATACCCGAGCGGTGCTATAGCGTCTCAAGGAAATGAGCTGACTCCGACACAAGTGAAGGATCAGCCTTCTGTCACTTTTGAGGCCGAGGCTGATGCTTTTTATACGCTCGTGTTCACGGACCCTGATAACTACGATGGACCTGAGCTGGTCTACCGTGAATGGCACCACTGGCTCGTAGGAAACATTCCTGGTGGTGACGTTTCTGCTGGAGAGACTCTATCGGGATACATCGGCTCCGGACCACCCCAGGGTACTGGGATCCATCGTTATGTCTACATCCTTTATAAACAACCAGGAAAATTGGACTTCGACGAGAAAAGGCTAACGAACACGTCTATTGATGGTCGCGCCTCGTTCTCCACGAAGAAGTTCGCTGAAAAGTACAACCTGGGGGCGCCTGTCGCCGGCAACTTCTACAGAGCGCAGTTCGACGACTATGTCCCACAGCTTTACAAAAGCTTGGGCGCCTAA
Protein
MSLVAQAFEASKIVPDVIPVAPTKNIELKYPSGAIASQGNELTPTQVKDQPSVTFEAEADAFYTLVFTDPDNYDGPELVYREWHHWLVGNIPGGDVSAGETLSGYIGSGPPQGTGIHRYVYILYKQPGKLDFDEKRLTNTSIDGRASFSTKKFAEKYNLGAPVAGNFYRAQFDDYVPQLYKSLGA

Summary

EMBL
BABH01022822    BABH01022823    BABH01022824    ODYU01003120    SOQ41480.1    ODYU01013000    + More
SOQ59597.1    RSAL01000008    RVE53995.1    AGBW02010783    OWR47803.1    KQ459602    KPI93183.1    AK402894    BAM19453.1    GGFF01000085    MBW20552.1    GGFM01003767    MBW24518.1    ADMH02002157    ETN58218.1    GGFK01004015    MBW37336.1    DQ443265    ABF51354.1    BABH01022813    DQ443264    ABF51353.1    GAMD01003235    JAA98355.1    GGFM01004393    MBW25144.1    DQ440356    CH477447    ABF18389.1    EAT40755.1    CH477908    EAT35142.1    GGFJ01009406    MBW58547.1    AK402412    BAM19034.1    ATLV01014395    KE524970    KFB38652.1    GAIX01003650    JAA88910.1    AK401244    BAM17866.1    KPI93182.1    JXUM01159252    GAPW01004355    KQ573291    JAC09243.1    KXJ67942.1    GAPW01004354    GAPW01004353    JAC09244.1    JAC09245.1    GDAI01000602    JAI17001.1    GAPW01004493    JAC09105.1    GFXV01002586    MBW14391.1    GGMS01007629    MBY76832.1    DS232058    EDS33457.1    ABLF02039519    AK340578    BAH71163.1    GANO01003484    JAB56387.1    KA645031    AFP59660.1    AK340577    BAH71162.1    SOQ59596.1    KB632130    ERL88969.1    OWR47804.1    APGK01024357    APGK01024358    KB740544    ENN80418.1    GFDL01009191    JAV25854.1    GFDF01005172    JAV08912.1    GEZM01006615    GEZM01006614    JAV95684.1    KZ150072    PZC74021.1    GGMR01009076    MBY21695.1    GFDF01005173    JAV08911.1    ABLF02039514    GFDF01005174    JAV08910.1    NWSH01000876    PCG73758.1    AJVK01060758    ABLF02039511    ABLF02039515    ABLF02039538    AK341032    BAH71516.1    GALA01000821    JAA94031.1    GBXI01012537    JAD01755.1    GEZM01006616    JAV95682.1    GFDG01002568    JAV16231.1    GFDG01002571    JAV16228.1    GFDG01002974    JAV15825.1    GFDG01002570    JAV16229.1    GFDG01002569    JAV16230.1    AXCN02002069    GAMC01004142    JAC02414.1    APCN01003375    KX270974    AQT33307.1    JTDY01005653    KOB66777.1    KX270975    AQT33309.1    MH366181    QBB01990.1    GDHF01023526    JAI28788.1    NNAY01000752    OXU26688.1    AAAB01008984    EAA14862.4    GAKP01006331    JAC52621.1    GALX01002873    JAB65593.1    KX270976    AQT33308.1    GAKP01006330    JAC52622.1    GBYB01012698    JAG82465.1    AXCM01000345    RSAL01000212    RVE44175.1    GL764397    EFZ17714.1    GL888048    EGI68836.1    GFXV01007777    MBW19582.1    KQ435710    KOX79734.1    ADTU01018970    UFQT01001398    SSX30377.1    GL438248    EFN69213.1   
Pfam
PF01161   PBP
Interpro
IPR035810   PEBP_euk        + More
IPR036610   PEBP-like_sf       
IPR008914   PEBP       
IPR001858   Phosphatidylethanolamine-bd_CS       
SUPFAM
SSF49777   SSF49777       
Gene 3D
PDB
5TVD     E-value=1.6246e-52,     Score=516

Ontologies

GO

Topology

Length:
185
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.0014
Exp number, first 60 AAs:
0
Total prob of N-in:
0.04338
outside
1  -  185
 
 

Population Genetic Test Statistics

Pi
246.942003
Theta
156.188245
Tajima's D
2.548037
CLR
0.167744
CSRT
0.948952552372381
Interpretation
Uncertain

Multiple alignment of Orthologues

 
 

Gene Tree

 
 
Peptides ×
Source Sequence Identity Evalue
28556443 AQFDDYVPQLYK 100.00 5e-22
28556443 AQFDDYVPQLYK 100.00 5e-22
26280517 SISTEMIMK 95.65 2e-08
28556443 YNLGAPVAGNFYR 100.00 8e-07
28556443 YNLGAPVAGNFYR 100.00 8e-07
28556443 QGNELTPTQVK 100.00 0.005
28556443 IVPDVIPVAPTK 100.00 0.005
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