Gene

KWMTBOMO09891

Pre Gene Modal

BGIBMGA013268

Annotation

CRAL-TRIO_domain-containing_protein?_partial_[Manduca_sexta]

Location

Bomo_Chr16(-):11308956-11321623      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 3.827

CDS

ATGGCGGTCAAGCCTATGTCAATTCAGAAGGAGTACGAGAAGCATCCGGACATCACTCCTGAGGACATAAAGAACCTTCGAGAATGGCTCAACAATCAGCCCCATTTACCGGGAGATTTGATATCAGATGTTGATCTGCTTATCGCGTACCATTGCTGTGAGAAGAGCATGGAGGTTTCGAAGCAAGTTATAGACTTGCACTACACTTTGAAGTCCCTCATCTTCAGTGACCGATTGTTTGACAAGAAAGTCGAGTTCTCATTGGACATTGCACTCTTCTATCAAATCCCAGTGTTTACAACAAGAGGTTACAGAGCGATTTACTTGCGGCTCCTAGATTTTAGCCCTAAGAATTTCTTTCTAGAAGAAGTGGTAAAGAGTTTCGTCTTGATTTACGATCTGTGGCAGTATGAAGAAGGAACGTGGCCTGGTTTCGTGGTGATCATAGATTTGGACGGAGTTGTCCTGGGACACCTGTCGCGGCTGGATCTAATGATGTTAAAGAAACTGCTGTATTTTGTACAAGAATGTATGCTGATTAAATTAAAGGAGGTCAACTTTATAAACGCGCCATCCTTCATGGATAAACTGATGTTAATGCTGAAACCGTTCCTCAATAAGCCGCTACTGGAGATCATCAGGATCCATTCGGTCGGAAGCGAAAAAATATACGAGACGATACCGAAAAAATATTTTCCCATCGAATCCGGAGGGGAGTTTAAAGATATGAATACTATCAAAGAGGAATTGTGTCAGCGGCTCAAGGCAAACCAAGATTACTTCATCAGAGAGAACAAGCGGAAAGTGAACGAAAGCTTGAGACCTGGGGGCAAAGCGGTCGCCGTGGAAAGCCTCTTCGGGATCCAAGGGAGCTTCAAGAAATTAGATATAGACTAA

Protein

MAVKPMSIQKEYEKHPDITPEDIKNLREWLNNQPHLPGDLISDVDLLIAYHCCEKSMEVSKQVIDLHYTLKSLIFSDRLFDKKVEFSLDIALFYQIPVFTTRGYRAIYLRLLDFSPKNFFLEEVVKSFVLIYDLWQYEEGTWPGFVVIIDLDGVVLGHLSRLDLMMLKKLLYFVQECMLIKLKEVNFINAPSFMDKLMLMLKPFLNKPLLEIIRIHSVGSEKIYETIPKKYFPIESGGEFKDMNTIKEELCQRLKANQDYFIRENKRKVNESLRPGGKAVAVESLFGIQGSFKKLDID

Uniprot

H9JUQ5   A0A0S2Z313   A0A2A4JLN7   A0A3S2L272   I4DLH3   A0A212F242   + More
A0A2H4RMW0   A0A2H1V703   A0A2H4RMR0   A0A2A4ISL2   A0A212F272   A0A0S2Z3U0   A0A212F251   A0A437BSJ4   A0A2A4JBJ3   A0A2H4RMR3   A0A2H1VNR9   A0A212F255   A0A2H4RMT6   A0A2H1VNP8   A0A194PT99   H9IUL0   A0A437B632   A0A2A4IZQ3   A0A2A4J9W6   H9JUR0   A0A194PRP9   A0A0N0PCB2   H9JUE6   H9JUQ9   A0A2H4RMP1   A0A1W4X5F9   A0A1B0FV49   W8C0A2   A0A1Y1JXE4   A0A034W6D9   A0A310SB26   A0A1B0D1Y1   B4JH73   B3P519   A0A151IIH9   B4QT82   Q297R5   Q9V9V4   A0A0S2Z3V6   A0A1I8MR30   Q4V5F0   A0A0K8UII7   B4G2X4   F4WLR1   B4M0Y7   B3MSY3   B4IJ16   A0A3B0JFB2   A0A0C9RRA5   A0A151HZ83   B4PNG2   A0A026W2F4   A0A151JTJ2   A0A158NIC6   E2BL70   A0A158NIC8   E2BL75   E2A8R3   K7J0H5   A0A1W4VVX1   A0A026VZY9   A0A151IIJ3   A0A151WMU4   A0A0L0CK65   A0A1Q3FQZ8   A0A151WMV5   A0A195ECZ2   K7ITY6   V9IMD6   B4N8S4   B4KCH5   A0A0L7R9P5   A0A0A1WPJ7   A0A0C9RRB1   A0A195ECX6   A0A1A9ZXR9   A0A0L7R9L5   A0A151WMV2   A0A151JTJ8   A0A1I8Q2Q3   A0A154PLP4   A0A2S2Q3J3   A0A1B6KMT6   E2A8R1   E9IA70   K7J0H8   A0A151JTT8   E2A8Q9   A0A310SFZ3  

Pubmed

19121390    25684408    22651552    26354079    22118469    29136137    + More
24495485    28004739    25348373    17994087    15632085    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    25315136    21719571    17550304    24508170    30249741    21347285    20798317    20075255    26108605    25830018    21282665   

EMBL

BABH01022824    KT943538    ALQ33296.1    NWSH01001157    PCG72320.1    RSAL01000223    + More
RVE44001.1    AK402141    KQ459595    BAM18763.1    KPI95986.1    AGBW02010783    OWR47818.1    MG434659    ATY51965.1    ODYU01000988    SOQ36579.1    MG434609    ATY51915.1    NWSH01007421    PCG62977.1    OWR47826.1    KT943550    ALQ33308.1    OWR47817.1    RSAL01000013    RVE53444.1    NWSH01002010    PCG69445.1    MG434617    ATY51923.1    ODYU01003540    SOQ42448.1    OWR47825.1    MG434644    ATY51950.1    ODYU01003541    SOQ42450.1    KPI95989.1    BABH01000888    RSAL01000144    RVE45960.1    NWSH01004847    PCG64660.1    NWSH01002262    PCG68761.1    BABH01022842    BABH01022843    BABH01022844    KPI95987.1    KQ460643    KPJ13319.1    BABH01022838    BABH01022835    BABH01022836    MG434601    ATY51907.1    AJWK01010375    GAMC01011526    JAB95029.1    GEZM01098136    JAV53982.1    GAKP01008688    JAC50264.1    KQ774368    OAD52321.1    AJVK01022454    AJVK01022455    AJVK01022456    CH916369    EDV92764.1    CH954182    EDV52933.1    KQ977477    KYN02476.1    CM000364    EDX15144.1    CM000070    EAL28140.1    AE014297    AAF57178.1    KT943566    ALQ33324.1    BT022706    AAY55122.1    GDHF01025961    JAI26353.1    CH479179    EDW24169.1    GL888213    EGI64859.1    CH940650    EDW67398.1    CH902623    EDV30373.1    CH480846    EDW50969.1    OUUW01000005    SPP81017.1    GBYB01009841    JAG79608.1    KQ976695    KYM77582.1    CM000160    EDW99244.2    KK107536    QOIP01000008    EZA49214.1    RLU19830.1    KQ981875    KYN34006.1    ADTU01016468    GL448949    EFN83556.1    ADTU01016481    ADTU01016482    ADTU01016483    ADTU01016484    EFN83561.1    GL437663    EFN70142.1    EZA49210.1    KYN02478.1    KQ982934    KYQ49140.1    JRES01000266    KNC32793.1    GFDL01005015    JAV30030.1    KYQ49137.1    KQ979074    KYN23073.1    JR052704    AEY61761.1    CH964232    EDW81525.1    CH933806    EDW14794.1    KQ414624    KOC67554.1    GBXI01013323    JAD00969.1    GBYB01009851    JAG79618.1    KYN23070.1    KOC67553.1    KYQ49138.1    KYN34015.1    KQ434973    KZC12772.1    GGMS01003091    MBY72294.1    GEBQ01027209    JAT12768.1    EFN70140.1    GL761987    EFZ22528.1    KYN34011.1    EFN70138.1    OAD52320.1   

Proteomes

UP000005204    UP000218220    UP000283053    UP000053268    UP000007151    UP000053240    + More
UP000192223    UP000092461    UP000092462    UP000001070    UP000008711    UP000078542    UP000000304    UP000001819    UP000000803    UP000095301    UP000008744    UP000007755    UP000008792    UP000007801    UP000001292    UP000268350    UP000078540    UP000002282    UP000053097    UP000279307    UP000078541    UP000005205    UP000008237    UP000000311    UP000002358    UP000192221    UP000075809    UP000037069    UP000078492    UP000007798    UP000009192    UP000053825    UP000092445    UP000095300    UP000076502   

PRIDE

H9JUQ5    H9IUL0    H9JUR0    H9JUE6    H9JUQ9    Q9V9V4    + More
Q4V5F0   

Pfam

PF00650   CRAL_TRIO

Interpro

IPR036865   CRAL-TRIO_dom_sf        + More
IPR001251   CRAL-TRIO_dom       
IPR036273   CRAL/TRIO_N_dom_sf       
IPR036291   NAD(P)-bd_dom_sf       
IPR020904   Sc_DH/Rdtase_CS       
IPR002347   SDR_fam       

SUPFAM

SSF52087   SSF52087        + More
SSF46938   SSF46938       
SSF51735   SSF51735       

Gene 3D

3.40.525.10    

CDD

cd00170  SEC14

ProteinModelPortal

H9JUQ5   A0A0S2Z313   A0A2A4JLN7   A0A3S2L272   I4DLH3   A0A212F242   + More
A0A2H4RMW0   A0A2H1V703   A0A2H4RMR0   A0A2A4ISL2   A0A212F272   A0A0S2Z3U0   A0A212F251   A0A437BSJ4   A0A2A4JBJ3   A0A2H4RMR3   A0A2H1VNR9   A0A212F255   A0A2H4RMT6   A0A2H1VNP8   A0A194PT99   H9IUL0   A0A437B632   A0A2A4IZQ3   A0A2A4J9W6   H9JUR0   A0A194PRP9   A0A0N0PCB2   H9JUE6   H9JUQ9   A0A2H4RMP1   A0A1W4X5F9   A0A1B0FV49   W8C0A2   A0A1Y1JXE4   A0A034W6D9   A0A310SB26   A0A1B0D1Y1   B4JH73   B3P519   A0A151IIH9   B4QT82   Q297R5   Q9V9V4   A0A0S2Z3V6   A0A1I8MR30   Q4V5F0   A0A0K8UII7   B4G2X4   F4WLR1   B4M0Y7   B3MSY3   B4IJ16   A0A3B0JFB2   A0A0C9RRA5   A0A151HZ83   B4PNG2   A0A026W2F4   A0A151JTJ2   A0A158NIC6   E2BL70   A0A158NIC8   E2BL75   E2A8R3   K7J0H5   A0A1W4VVX1   A0A026VZY9   A0A151IIJ3   A0A151WMU4   A0A0L0CK65   A0A1Q3FQZ8   A0A151WMV5   A0A195ECZ2   K7ITY6   V9IMD6   B4N8S4   B4KCH5   A0A0L7R9P5   A0A0A1WPJ7   A0A0C9RRB1   A0A195ECX6   A0A1A9ZXR9   A0A0L7R9L5   A0A151WMV2   A0A151JTJ8   A0A1I8Q2Q3   A0A154PLP4   A0A2S2Q3J3   A0A1B6KMT6   E2A8R1   E9IA70   K7J0H8   A0A151JTT8   E2A8Q9   A0A310SFZ3  

PDB

1OIZ     E-value=3.46852e-07,     Score=128

KEGG

101746033    no KO assigned | (RefSeq) clavesin-1-like

GO

GO:0016491  

Length:

298

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.714259999999999

Exp number, first 60 AAs:

0

Total prob of N-in:

0.06952

outside

1  -  298

 

 

Pi

243.656353

Theta

171.812634

Tajima's D

1.855385

CLR

0.251183

CSRT

0.855307234638268

Interpretation

Uncertain