Gene

KWMTBOMO09890  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA013163

Annotation

cuticular_protein_RR-1_motif_56_precursor_[Bombyx_mori]

Location

Bomo_Chr16(+):11296004-11303209      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 1.845

CDS

ATGCTGTGCCACACACTCATTCTGGTGCTGGCTGCAGGCCTGACCAGTTGCGACGTGTCTCACCTCGAGACGACCACGCCTGACCCTCCACCGAAGCCCTACGTGTTCTCCTATACTGCTGGACGATTCCCCGGACACGTTGACAGGGAACACACCGAAGTCAGTGACGGCAGCGGAGTCGTGAGAGGAAAATTCGCGTACGTCGACCCACGTCACAAGGTTCGGACAGTGGACTACGTGGCTGACAAGGAAGGCTTCCATCCGATACTGAGCGACGTGCCTCCAGAGCACCCAGCTGACTCTGAATCCGTTGCCTTGGCTAAAGACAGGCACTTCCAGCTATACTCCAAGATTGCTGAAGAGCACGCCCAACATCCACATCCTTATGAAACCAGCGTTCCTCGTCAATCAGCCGCCGTCGCCGAAGCCACCTTGAAGCACTCTGAGCTTTTCCGCGTTATCGCCGAGCAGCACGCGAGGATCGCGGCGGAGAGAGAGGCTCTCATCAGGGAGGAAGAAGAGAAACAGCACCTGCAGGAACTTGAACAGTAG

Protein

MLCHTLILVLAAGLTSCDVSHLETTTPDPPPKPYVFSYTAGRFPGHVDREHTEVSDGSGVVRGKFAYVDPRHKVRTVDYVADKEGFHPILSDVPPEHPADSESVALAKDRHFQLYSKIAEEHAQHPHPYETSVPRQSAAVAEATLKHSELFRVIAEQHARIAAEREALIREEEEKQHLQELEQ

Uniprot

C0H6P8   A0A212F263   A0A1E1WDE9   A0A2A4JKS2   A0A2A4ITW2   S4NX94   + More
A0A3S2TRV4   A0A2H1VIH9   A0A194PSP2   I4DLH1   A0A0L7KWH7   A0A1W4VGV0   B4KPJ7   A0A1W4XMT9   A0A1S4EVS6   A0A182G447   B4LKY5   B3NJQ1   A0A1B0CKB3   B3MHJ1   Q17P76   A0A1L8E3Q2   A0A1L8E414   B0W6Q8   B4QF16   Q7K5J8   B4HQ88   A0A1A9VE42   A0A1B0GBJ4   A0A1A9ZBI0   W5JKA1   T1P9U6   B4PA54   A0A1A9XEC6   A0A1B0BXB8   A0A151WMP9   A0A1I8PSC1   A0A1A9W0T3   A0A1Q3FP48   B4J5J7   A0A1I8JW10   A0A1Q3FP23   A0A0L0CKS9   B4MKE3   B4MKE7   A0A0M4EE10   J3JTD3   N6TTS8   A0A026W2E9   U4UMX9   A0A1J1IIT9   A0A182FQY4   W8BLP8   A0A0J7KNM8   A0A182R445   A0A182M0W2   E9IA69   A0A182NZ50   A0A3S7SJP5   A0A3B0IYH9   A0A151JTN1   A0A0A1XEL4   A0A158NIG2   A0A195EDZ7   A0A0T6B0Z9   A0A084VRI6   A0A1B6CQP1   D2A4U4   A0A034WI94   A0A0K8WE54   A0A182J8H7   A0A0N0U664   F5HKN8   A0A336M846   K7ITY8   E0VJ89   A0A310S4T2   A0A0L7R9K3   A0A232EEQ1  

Pubmed

19121390    19280704    22118469    23622113    26354079    22651552    + More
26227816    17994087    26483478    17510324    22936249    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    20920257    23761445    25315136    17550304    26108605    22516182    23537049    24508170    24495485    21282665    25830018    21347285    24438588    18362917    19820115    25348373    12364791    20075255    20566863    28648823   

EMBL

BABH01022825    BR000557    FAA00559.1    AGBW02010783    OWR47827.1    GDQN01009806    + More
GDQN01006051    JAT81248.1    JAT85003.1    NWSH01001157    PCG72318.1    NWSH01008397    PCG62573.1    GAIX01009159    JAA83401.1    RSAL01000013    RVE53443.1    ODYU01002753    SOQ40638.1    KQ459595    KPI95988.1    AK402139    BAM18761.1    JTDY01005053    KOB67421.1    CH933808    EDW10193.2    JXUM01041995    KQ561306    KXJ79051.1    CH940648    EDW60789.1    CH954179    EDV55320.1    AJWK01015960    AJWK01015961    CH902619    EDV35827.1    CH477193    EAT48557.1    GFDF01000726    JAV13358.1    GFDF01000725    JAV13359.1    DS231849    EDS36889.1    CM000362    CM002911    EDX07927.1    KMY95280.1    AE013599    AY047580    AAF57459.1    AAK77312.1    ACL83175.1    CH480816    EDW48713.1    CCAG010014017    ADMH02001265    ETN63315.1    KA645492    AFP60121.1    CM000158    EDW91385.1    JXJN01022165    KQ982934    KYQ49136.1    GFDL01005674    JAV29371.1    CH916367    EDW00760.1    GFDL01005728    JAV29317.1    JRES01000264    KNC32852.1    CH963846    EDW72582.2    EDW72586.2    CP012524    ALC42240.1    BT126489    AEE61453.1    APGK01019132    KB740092    ENN81453.1    KK107536    EZA49209.1    KB632429    ERL95439.1    CVRI01000054    CRL00159.1    GAMC01006823    JAB99732.1    LBMM01005052    KMQ91856.1    AXCM01000144    GL761987    EFZ22549.1    MG601591    AYA49916.1    OUUW01000001    SPP72895.1    KQ981875    KYN34014.1    GBXI01004885    JAD09407.1    ADTU01016490    KQ979074    KYN23069.1    LJIG01016383    KRT80766.1    ATLV01015682    KE525027    KFB40580.1    GEDC01021528    JAS15770.1    KQ971344    EFA05174.1    GAKP01003681    JAC55271.1    GDHF01002947    JAI49367.1    KQ435735    KOX77178.1    AAAB01008859    EGK96790.1    UFQT01000679    SSX26494.1    DS235221    EEB13445.1    KQ774368    OAD52322.1    KQ414624    KOC67555.1    NNAY01005263    OXU16808.1   

Proteomes

UP000005204    UP000007151    UP000218220    UP000283053    UP000053268    UP000037510    + More
UP000192221    UP000009192    UP000192223    UP000069940    UP000249989    UP000008792    UP000008711    UP000092461    UP000007801    UP000008820    UP000002320    UP000000304    UP000000803    UP000001292    UP000078200    UP000092444    UP000092445    UP000000673    UP000095301    UP000002282    UP000092443    UP000092460    UP000075809    UP000095300    UP000091820    UP000001070    UP000076407    UP000037069    UP000007798    UP000092553    UP000019118    UP000053097    UP000030742    UP000183832    UP000069272    UP000036403    UP000075900    UP000075883    UP000075884    UP000268350    UP000078541    UP000005205    UP000078492    UP000030765    UP000007266    UP000075880    UP000053105    UP000007062    UP000002358    UP000009046    UP000053825    UP000215335   

PRIDE

C0H6P8    Q7K5J8   

Pfam

PF00379   Chitin_bind_4

Interpro

IPR000618   Insect_cuticle       

ProteinModelPortal

C0H6P8   A0A212F263   A0A1E1WDE9   A0A2A4JKS2   A0A2A4ITW2   S4NX94   + More
A0A3S2TRV4   A0A2H1VIH9   A0A194PSP2   I4DLH1   A0A0L7KWH7   A0A1W4VGV0   B4KPJ7   A0A1W4XMT9   A0A1S4EVS6   A0A182G447   B4LKY5   B3NJQ1   A0A1B0CKB3   B3MHJ1   Q17P76   A0A1L8E3Q2   A0A1L8E414   B0W6Q8   B4QF16   Q7K5J8   B4HQ88   A0A1A9VE42   A0A1B0GBJ4   A0A1A9ZBI0   W5JKA1   T1P9U6   B4PA54   A0A1A9XEC6   A0A1B0BXB8   A0A151WMP9   A0A1I8PSC1   A0A1A9W0T3   A0A1Q3FP48   B4J5J7   A0A1I8JW10   A0A1Q3FP23   A0A0L0CKS9   B4MKE3   B4MKE7   A0A0M4EE10   J3JTD3   N6TTS8   A0A026W2E9   U4UMX9   A0A1J1IIT9   A0A182FQY4   W8BLP8   A0A0J7KNM8   A0A182R445   A0A182M0W2   E9IA69   A0A182NZ50   A0A3S7SJP5   A0A3B0IYH9   A0A151JTN1   A0A0A1XEL4   A0A158NIG2   A0A195EDZ7   A0A0T6B0Z9   A0A084VRI6   A0A1B6CQP1   D2A4U4   A0A034WI94   A0A0K8WE54   A0A182J8H7   A0A0N0U664   F5HKN8   A0A336M846   K7ITY8   E0VJ89   A0A310S4T2   A0A0L7R9K3   A0A232EEQ1  

KEGG

100379415    no KO assigned | (RefSeq) CPR56, BmorCPR56; cuticular protein RR-1 motif 56

GO

GO:0042302   GO:0040003   GO:0031012   GO:0008010   GO:0016021   GO:0005622   GO:0006810   GO:0006412   GO:0006414   GO:0004816   GO:0005737   GO:0006421   GO:0016155   GO:0003824  

SignalP

Position:   1 - 17,         Likelihood:  0.996393

 

 

Length:

183

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.01755

Exp number, first 60 AAs:

0.01755

Total prob of N-in:

0.02028

outside

1  -  183

 

 

Pi

281.160389

Theta

168.778395

Tajima's D

2.234918

CLR

0.074313

CSRT

0.91630418479076

Interpretation

Uncertain