Gene

KWMTBOMO09886

Pre Gene Modal

BGIBMGA013269

Annotation

CRAL-TRIO_domain-containing_protein?_partial_[Manduca_sexta]

Location

Bomo_Chr16(-):11229296-11254293      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 3.205

CDS

ATGTCACAGGCTGTGAAGGCAATTACTTTAGAAGATGAATACAAGAAGAAGACAGGTATCACACCGGAAGACGTTAGGAAGATGAGGCAGTGGCTTCAGACTCAACCCCATTTGCCAAGAGATCATTTAACTGATTTGGACCTCATTCTCGTCTACCACTGCTGCCACAGAAGCATGGAGGTCTCCAAGCAGGTCCTTGACCTCAACTGCACGTTGCGTACGCTGTTCACAAATTTGTTCAAGGATAGACTTCCTGATGGGAGGACTTTGGTCAGCATGAAAGTTCCTTTGGTGTTACCGTTAGAGGTTCGAGCGTATGATGACTCGGCAGTTATATATTGCAGGCTCCTCGACTATAACACCAAAAACTTCATATTCCAGGAGGCTATCAAGATAGTATTAATGGTGATTGACCTCTGGCAATACCAGTCGGGGACTTGGCCAGGGCTGGTCATAGTTATTGACTTGGACAAGGTCACTCTATCCCATCTTGCCAGACTTGATATTCAGACCGTACAGCAGTTTCTATTTTATTTGCAGGAGGCGATGTTCGTCAAACTCCAAGGCCTACATTTCATGAATGCGCCATCATTCATGGACCGTTTGTTGATGATTCTGAAGCCGTTTATGAAGAAAGAACTCATTGACATGATGGTTATCCACCAGATAGGTTCCAAGACGATCGGCAAATATCTTCCGATTGAGGGACTGCCTAAACAAGCAGGAGGAGAGTACAAGCCGTTTGAGGAAGCTCAAGCGGACGTCATTGCTAATGCCAAAGCGAATTACGATTATTTTGCTGAGGAGAATAAGAAGAGGGTGGTGGAATCACTGAGGCCCGGAAAACCGAAGACAATCACAGACATATTCGGAGGGATAGAGGGATCGTTTAAAAAATTAGAAATAGATTAA

Protein

MSQAVKAITLEDEYKKKTGITPEDVRKMRQWLQTQPHLPRDHLTDLDLILVYHCCHRSMEVSKQVLDLNCTLRTLFTNLFKDRLPDGRTLVSMKVPLVLPLEVRAYDDSAVIYCRLLDYNTKNFIFQEAIKIVLMVIDLWQYQSGTWPGLVIVIDLDKVTLSHLARLDIQTVQQFLFYLQEAMFVKLQGLHFMNAPSFMDRLLMILKPFMKKELIDMMVIHQIGSKTIGKYLPIEGLPKQAGGEYKPFEEAQADVIANAKANYDYFAEENKKRVVESLRPGKPKTITDIFGGIEGSFKKLEID

Uniprot

A0A0S2Z3U0   A0A2H1VNR9   A0A2H1VNP8   A0A437BSJ4   A0A2A4JBJ3   A0A2H1V703   + More
A0A2H4RMR3   A0A212F272   A0A2H4RMT6   A0A194PT99   A0A2A4IZQ3   A0A212F255   A0A3S2L272   A0A212F242   H9JUE6   H9JUQ9   A0A2A4JLN7   I4DLH3   A0A2H4RMW0   A0A194PRP9   A0A2H4RMR0   A0A0S2Z313   H9JUR0   H9JUQ5   A0A2H4RMP1   A0A437B632   A0A0N0PCB2   H9IUL0   A0A2A4J9W6   A0A212F251   A0A2A4ISL2   A0A0L7LLE7   E2BL75   K7J0H5   A0A151HZ83   A0A0L7R9P5   A0A158NIC6   A0A026W2F4   A0A310SB26   F4WLR1   E2BL70   V9IMD6   K7J0H8   A0A151WMV2   A0A151IIH9   E2A8Q9   A0A0S2Z3V6   A0A0J7NH54   A0A1W4X5F9   A0A151WMV5   A0A1Y1JXE4   K7ITY7   K7ITY6   A0A151JTJ8   A0A195ECZ2   A0A026VZY9   W8C0A2   A0A151WMU4   A0A158NIC8   E9IA70   A0A2A3EJJ4   A0A151JTT8   A0A195ECX6   Q297R5   B4G2X4   A0A1W4VVX1   A0A151HZE1   A0A1Q3FQZ8   A0A158NIC7   A0A151JTJ2   A0A3B0JFB2   A0A1I8PTI0   A0A154PLR6   F4WEQ5   A0A0L7LI44   A0A034W6D9   Q4V5F0   B4QT82   B4IJ16   A0A151IIJ3   B4N8S4   A0A1B0FV49   Q9V9V4   A0A0K8UII7   A0A1Y1L4D8   A0A232F895   B4PNG2   A0A0L0CK65   A0A1I8Q2Q3   B3P519   B4JH73   E2A8R3   B3MSY3   A0A1I8MR30   A0A158NA70   A0A195BKL4   B4KCH5  

Pubmed

25684408    29136137    22118469    26354079    19121390    22651552    + More
26227816    20798317    20075255    21347285    24508170    30249741    21719571    28004739    24495485    21282665    15632085    17994087    25348373    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    28648823    17550304    26108605    25315136   

EMBL

KT943550    ALQ33308.1    ODYU01003540    SOQ42448.1    ODYU01003541    SOQ42450.1    + More
RSAL01000013    RVE53444.1    NWSH01002010    PCG69445.1    ODYU01000988    SOQ36579.1    MG434617    ATY51923.1    AGBW02010783    OWR47826.1    MG434644    ATY51950.1    KQ459595    KPI95989.1    NWSH01004847    PCG64660.1    OWR47825.1    RSAL01000223    RVE44001.1    OWR47818.1    BABH01022838    BABH01022835    BABH01022836    NWSH01001157    PCG72320.1    AK402141    BAM18763.1    KPI95986.1    MG434659    ATY51965.1    KPI95987.1    MG434609    ATY51915.1    KT943538    ALQ33296.1    BABH01022842    BABH01022843    BABH01022844    BABH01022824    MG434601    ATY51907.1    RSAL01000144    RVE45960.1    KQ460643    KPJ13319.1    BABH01000888    NWSH01002262    PCG68761.1    OWR47817.1    NWSH01007421    PCG62977.1    JTDY01000701    KOB76164.1    GL448949    EFN83561.1    KQ976695    KYM77582.1    KQ414624    KOC67554.1    ADTU01016468    KK107536    QOIP01000008    EZA49214.1    RLU19830.1    KQ774368    OAD52321.1    GL888213    EGI64859.1    EFN83556.1    JR052704    AEY61761.1    KQ982934    KYQ49138.1    KQ977477    KYN02476.1    GL437663    EFN70138.1    KT943566    ALQ33324.1    LBMM01005052    KMQ91855.1    KYQ49137.1    GEZM01098136    JAV53982.1    KQ981875    KYN34015.1    KQ979074    KYN23073.1    EZA49210.1    GAMC01011526    JAB95029.1    KYQ49140.1    ADTU01016481    ADTU01016482    ADTU01016483    ADTU01016484    GL761987    EFZ22528.1    KZ288238    PBC31369.1    KYN34011.1    KYN23070.1    CM000070    EAL28140.1    CH479179    EDW24169.1    KYM77581.1    GFDL01005015    JAV30030.1    ADTU01016476    ADTU01016477    KYN34006.1    OUUW01000005    SPP81017.1    KQ434973    KZC12773.1    GL888105    EGI67317.1    JTDY01001042    KOB75034.1    GAKP01008688    JAC50264.1    BT022706    AAY55122.1    CM000364    EDX15144.1    CH480846    EDW50969.1    KYN02478.1    CH964232    EDW81525.1    AJWK01010375    AE014297    AAF57178.1    GDHF01025961    JAI26353.1    GEZM01068032    JAV67250.1    NNAY01000747    OXU26710.1    CM000160    EDW99244.2    JRES01000266    KNC32793.1    CH954182    EDV52933.1    CH916369    EDV92764.1    EFN70142.1    CH902623    EDV30373.1    ADTU01010052    KQ976455    KYM85150.1    CH933806    EDW14794.1   

Proteomes

UP000283053    UP000218220    UP000007151    UP000053268    UP000005204    UP000053240    + More
UP000037510    UP000008237    UP000002358    UP000078540    UP000053825    UP000005205    UP000053097    UP000279307    UP000007755    UP000075809    UP000078542    UP000000311    UP000036403    UP000192223    UP000078541    UP000078492    UP000242457    UP000001819    UP000008744    UP000192221    UP000268350    UP000095300    UP000076502    UP000000304    UP000001292    UP000007798    UP000092461    UP000000803    UP000215335    UP000002282    UP000037069    UP000008711    UP000001070    UP000007801    UP000095301    UP000009192   

PRIDE

H9JUE6    H9JUQ9    H9JUR0    H9JUQ5    H9IUL0    Q4V5F0    + More
Q9V9V4   

Pfam

PF00650   CRAL_TRIO        + More
PF00046   Homeodomain
PF00412   LIM

Interpro

IPR001251   CRAL-TRIO_dom        + More
IPR036865   CRAL-TRIO_dom_sf       
IPR036273   CRAL/TRIO_N_dom_sf       
IPR036291   NAD(P)-bd_dom_sf       
IPR020904   Sc_DH/Rdtase_CS       
IPR002347   SDR_fam       
IPR001356   Homeobox_dom       
IPR001781   Znf_LIM       
IPR009057   Homeobox-like_sf       

SUPFAM

SSF52087   SSF52087        + More
SSF46938   SSF46938       
SSF51735   SSF51735       
SSF46689   SSF46689       

Gene 3D

3.40.525.10    

CDD

cd00170  SEC14
cd00086  homeodomain

ProteinModelPortal

A0A0S2Z3U0   A0A2H1VNR9   A0A2H1VNP8   A0A437BSJ4   A0A2A4JBJ3   A0A2H1V703   + More
A0A2H4RMR3   A0A212F272   A0A2H4RMT6   A0A194PT99   A0A2A4IZQ3   A0A212F255   A0A3S2L272   A0A212F242   H9JUE6   H9JUQ9   A0A2A4JLN7   I4DLH3   A0A2H4RMW0   A0A194PRP9   A0A2H4RMR0   A0A0S2Z313   H9JUR0   H9JUQ5   A0A2H4RMP1   A0A437B632   A0A0N0PCB2   H9IUL0   A0A2A4J9W6   A0A212F251   A0A2A4ISL2   A0A0L7LLE7   E2BL75   K7J0H5   A0A151HZ83   A0A0L7R9P5   A0A158NIC6   A0A026W2F4   A0A310SB26   F4WLR1   E2BL70   V9IMD6   K7J0H8   A0A151WMV2   A0A151IIH9   E2A8Q9   A0A0S2Z3V6   A0A0J7NH54   A0A1W4X5F9   A0A151WMV5   A0A1Y1JXE4   K7ITY7   K7ITY6   A0A151JTJ8   A0A195ECZ2   A0A026VZY9   W8C0A2   A0A151WMU4   A0A158NIC8   E9IA70   A0A2A3EJJ4   A0A151JTT8   A0A195ECX6   Q297R5   B4G2X4   A0A1W4VVX1   A0A151HZE1   A0A1Q3FQZ8   A0A158NIC7   A0A151JTJ2   A0A3B0JFB2   A0A1I8PTI0   A0A154PLR6   F4WEQ5   A0A0L7LI44   A0A034W6D9   Q4V5F0   B4QT82   B4IJ16   A0A151IIJ3   B4N8S4   A0A1B0FV49   Q9V9V4   A0A0K8UII7   A0A1Y1L4D8   A0A232F895   B4PNG2   A0A0L0CK65   A0A1I8Q2Q3   B3P519   B4JH73   E2A8R3   B3MSY3   A0A1I8MR30   A0A158NA70   A0A195BKL4   B4KCH5  

PDB

3HY5     E-value=0.000121437,     Score=107

KEGG

101746275    no KO assigned | (RefSeq) alpha-tocopherol transfer protein-like

GO

GO:0016491   GO:0003677   GO:0005634   GO:0046872  

Subcellular location

Nucleus  

Length:

303

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.17012

Exp number, first 60 AAs:

0

Total prob of N-in:

0.04314

outside

1  -  303

 

 

Pi

219.025902

Theta

170.23708

Tajima's D

0.916182

CLR

0.396411

CSRT

0.635268236588171

Interpretation

Uncertain