SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO09884  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA013160
Annotation
3-dehydroecdysone_3alpha-reductase_[Bombyx_mori]
Location in the cell
Cytoplasmic   Reliability : 1.152
 

Sequence

CDS
ATGAGTTTCACAAATAAAGTGGTTCTCGTCACCGGGGGCAGCTCGGGTATCGGTGCCTCTGCCGCCGTACACTTCGCTAAGGAAGGTGCGGACGTGGCCATAGTAGGTCGAAACGTTACGAAACTGGACAACGTGGCCCGGGAATGTGCGCAAGTCGGCAAAAAGCCGGTCATCATTAAAGCTGACATTTCAAAAGACGAAGAAGCGAAGACCATCGTTCAACAAACCATTGAAGCCTTCGGGAAGCTAGATGTGCTCATTAACAACGCTGGAATGAACAAATCCGGGTCCCTGCTCGCTGGCAACCTCCTTGAATCGTACGACGCAGTCACAGCGACTAATCTGAGAGCGGTCATTTTGATAACGAGCCTCGCTGCTCCGCACCTCATCGAGACGAAGGGAAACATCATAAACGTATCCAGTATCGGCGGAACCATGGTACCAATGCCAGGGTTTCTGGCATACTGCATGGGGAAAGCTAGTTTGAATCATTTTACGCGTGGTATTGCCTTGGAATTAGCACCTCATGGTGTCAGAGCAAACATCATCAGTCCAGGTCTTGTTTTAACTGATATCATTGAGAACTCTGATAATCAGATTAGCTGGGACATTTTTAGGGCTGCCACGGCGTTGAAGAAATTAGGAGAACCGTCAGAAATTGCCGAGTTGATGTTGTTCCTGGCAAGTGACAAAGCTAGAAGCATAACTGGCTCGAACTACGTCTCCGACAATGGAATGCTGCTGCTCAGATGA
Protein
MSFTNKVVLVTGGSSGIGASAAVHFAKEGADVAIVGRNVTKLDNVARECAQVGKKPVIIKADISKDEEAKTIVQQTIEAFGKLDVLINNAGMNKSGSLLAGNLLESYDAVTATNLRAVILITSLAAPHLIETKGNIINVSSIGGTMVPMPGFLAYCMGKASLNHFTRGIALELAPHGVRANIISPGLVLTDIIENSDNQISWDIFRAATALKKLGEPSEIAELMLFLASDKARSITGSNYVSDNGMLLLR

Summary

Similarity
Belongs to the short-chain dehydrogenases/reductases (SDR) family.
EMBL
JF433973    AEM17060.1    BABH01022835    BABH01022833    BABH01022834    KQ461178    + More
KPJ07784.1    KPJ07786.1    KPJ07785.1    AK405443    BAM20756.1    KQ460655    KPJ12939.1    KQ459602    KPI93179.1    KPI93176.1    KQ459595    KPI95966.1    KPJ12938.1    KQ459579    KPI99448.1    KPJ12937.1    KQ460650    KPJ13113.1    KQ460571    KPJ13957.1    KPI93178.1    JTDY01006084    KOB66312.1    JTDY01000942    KOB75350.1    NWSH01001398    PCG71373.1    ODYU01013212    SOQ59906.1    KPI95964.1    NWSH01004416    PCG65151.1    AGBW02014512    OWR41545.1    ODYU01001522    SOQ37852.1    KPI93177.1    KQ459580    KPI99297.1    BABH01022634    SOQ37854.1    AGBW02013539    OWR43254.1    OWR41546.1    BABH01012981    NWSH01006959    PCG63175.1    PCG71375.1    ODYU01000551    SOQ35503.1    KPI95965.1    JTDY01009080    KOB64125.1    AK401409    BAM18031.1    AK404043    BAM20116.1    BABH01022635    BABH01022636    LADJ01004337    KPJ20878.1    PCG71374.1    NWSH01001353    PCG71567.1    AF255341    AAF70499.1    PCG71376.1    PCG65150.1    SOQ37853.1    JTDY01004206    KOB68460.1    PCG65149.1    ODYU01010994    SOQ56451.1    NWSH01003146    PCG66863.1    AGBW02010783    OWR47824.1    KOB66313.1    ODYU01009744    SOQ54378.1    ODYU01002398    SOQ39832.1    PCG65148.1    ODYU01008068    SOQ51354.1    KQ459717    KPJ20326.1    ODYU01011234    SOQ56848.1    PCG71569.1    KZ149910    PZC78149.1    JTDY01008777    KOB64404.1    JTDY01001151    KOB74729.1    OWR43255.1    ODYU01010604    SOQ55826.1    PZC78150.1    EZ407245    ACX53802.1    PZC78151.1    AGBW02010784    OWR47781.1    KQ459596    KPI95296.1    JTDY01000816    KOB75772.1    KQ460317    KPJ16010.1    AGBW02012537    OWR44869.1    KOB64405.1    KQ460643    KPJ13319.1    PCG71568.1    OWR47820.1    ODYU01005275    SOQ45968.1    NWSH01001143    PCG72417.1    ODYU01012735    SOQ59194.1    JTDY01007623    KOB65070.1    NWSH01000090    PCG79695.1    ODYU01010177    SOQ55120.1    ODYU01006626    SOQ48636.1    JTDY01004127    KOB68555.1    BT126415    KB632402    AEE61379.1    ERL94969.1    CAEY01000740    NWSH01005813    PCG63919.1    NWSH01000134    PCG79206.1    KQ971312    EEZ97890.1    KQ459604    KPI92523.1    KQ982320    KYQ57786.1    KK854833    PTY19106.1    GL888128    EGI66781.1    ADTU01003750   
Pfam
PF00106   adh_short        + More
PF00650   CRAL_TRIO
PF00292   PAX
Interpro
IPR036291   NAD(P)-bd_dom_sf        + More
IPR020904   Sc_DH/Rdtase_CS       
IPR002347   SDR_fam       
IPR036865   CRAL-TRIO_dom_sf       
IPR001251   CRAL-TRIO_dom       
IPR036388   WH-like_DNA-bd_sf       
IPR009057   Homeobox-like_sf       
IPR001523   Paired_dom       
SUPFAM
SSF51735   SSF51735        + More
SSF52087   SSF52087       
SSF46689   SSF46689       
Gene 3D
PDB
1SPX     E-value=3.81894e-33,     Score=351

Ontologies

Topology

Subcellular location
Nucleus  
Length:
250
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
6.05448999999999
Exp number, first 60 AAs:
3.82522
Total prob of N-in:
0.25122
outside
1  -  250
 
 

Population Genetic Test Statistics

Pi
238.654829
Theta
162.307843
Tajima's D
1.597254
CLR
0
CSRT
0.807759612019399
Interpretation
Uncertain

Multiple alignment of Orthologues

 
 

Gene Tree

 
 
Peptides ×
Source Sequence Identity Evalue
28556443 GIALELAPR 95.45 2e-07
28556443 SGLAAYIFTK 95.45 2e-07
28556443 NIVQQTIDAFGK 100.00 2e-04
28556443 EGADVAIVGR 100.00 2e-04
Copyright@ 2018-2023    Any Comments and suggestions mail to:zhuzl@cqu.edu.cn   渝ICP备19006517号

渝公网安备 50010602502065号