SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO09881  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA013271
Annotation
3-dehydroecdysone_3alpha-reductase_[Bombyx_mori]
Location in the cell
Cytoplasmic   Reliability : 1.338
 

Sequence

CDS
ATGAGTTTCATAAATAAAGTGGTTCTCGTCACCGGCGGCAGCTCGGGTATCGGTGCCTCGGCCGCCAAACACTTCGCTAAAGTAGGTGCGGACGTGGCCATAGTAGGTCGAAACGTTACAAAACTGGACAACGTGGCCCGGGAATGTGCGCAAGTCGGCAAAAAACCGCTCGTCATAAGAACTGACATTTCAAAAGACGACGACGCGAAGACCATCGTCCAGCAAACCGTTGACGCCTTCGGAAAGCTAGATGTGCTCATTAACAACGCTGCAATGAACAAAGCCGGATCCCTGCTCGCTGGCAACCTCCTTGAATCGTACGACGCAGTCACAGCGGCTAATTTGAGAGCGGTCATTTTGATAACGAGCCTCGCGGCTCCGCACCTCATCAAGACAAAGGGAAACATCATAAACGTATCCAGTATCGGTGGAATCATGGTACCGTTGCCAGGATTACTGGTATATGGCATGGGGAAAGCTAGTTTGAATCATTTTACACGTGGCATTGCCTTGGAGTTAGCTCCTCATGGTGTCAGAGCTAACATCATCAGTCCAGGTCCTGTTTTAACTGATATCCTTGAGAATTCTGATACTCCAATTAGCTGGGAAATTTTTAAGGCTGCCACGGCATTAAAGAGACTAGGAGAACCATCGGAAATAGCCGAATTGATGTTATTCCTGGCAAGTGACAAAGCTAGAAGCATAACCGGCTCGAACTACGTCTCCGACAATGGAATGTTGCTGCTCAGATGA
Protein
MSFINKVVLVTGGSSGIGASAAKHFAKVGADVAIVGRNVTKLDNVARECAQVGKKPLVIRTDISKDDDAKTIVQQTVDAFGKLDVLINNAAMNKAGSLLAGNLLESYDAVTAANLRAVILITSLAAPHLIKTKGNIINVSSIGGIMVPLPGLLVYGMGKASLNHFTRGIALELAPHGVRANIISPGPVLTDILENSDTPISWEIFKAATALKRLGEPSEIAELMLFLASDKARSITGSNYVSDNGMLLLR

Summary

Similarity
Belongs to the short-chain dehydrogenases/reductases (SDR) family.
EMBL
BABH01022835    JF433973    AEM17060.1    BABH01022833    BABH01022834    KQ461178    + More
KPJ07784.1    KQ459595    KPI95966.1    AK405443    BAM20756.1    KQ460655    KPJ12939.1    KPJ07785.1    KPJ12938.1    KPJ12937.1    KQ459602    KPI93179.1    KQ460650    KPJ13113.1    KQ459579    KPI99448.1    KPJ07786.1    KPI93177.1    ODYU01001522    SOQ37854.1    AGBW02014512    OWR41545.1    OWR41546.1    JTDY01009080    KOB64125.1    JTDY01000942    KOB75350.1    ODYU01013212    SOQ59906.1    NWSH01001398    PCG71373.1    NWSH01004416    PCG65151.1    KPI93176.1    BABH01022634    AK404043    BAM20116.1    BABH01012981    SOQ37852.1    AGBW02013539    OWR43254.1    KPI93178.1    KQ460571    KPJ13957.1    AK401409    BAM18031.1    JTDY01006084    KOB66312.1    PCG71375.1    NWSH01006959    PCG63175.1    NWSH01001353    PCG71567.1    KPI95965.1    SOQ37853.1    PCG71374.1    KQ459717    KPJ20326.1    AF255341    AAF70499.1    BABH01022635    BABH01022636    KQ459596    KPI95296.1    KQ459580    KPI99297.1    LADJ01004337    KPJ20878.1    PCG65149.1    KPI95964.1    ODYU01000551    SOQ35503.1    ODYU01011234    SOQ56848.1    AGBW02010783    OWR47824.1    PCG65150.1    NWSH01003146    PCG66863.1    PCG71376.1    ODYU01005275    SOQ45968.1    OWR43255.1    JTDY01000816    KOB75772.1    ODYU01002398    SOQ39832.1    PCG65148.1    ODYU01009744    SOQ54378.1    JTDY01004206    KOB68460.1    PCG71569.1    ODYU01008068    SOQ51354.1    AGBW02010784    OWR47781.1    JTDY01001151    KOB74729.1    KOB66313.1    EZ407245    ACX53802.1    ODYU01010994    SOQ56451.1    KZ149910    PZC78150.1    PZC78151.1    JTDY01008777    KOB64405.1    KOB64404.1    PZC78149.1    OWR47820.1    PCG71568.1    ODYU01010604    SOQ55826.1    KQ460643    KPJ13319.1    KQ460317    KPJ16010.1    AGBW02012537    OWR44869.1    ODYU01010177    SOQ55120.1    ODYU01012735    SOQ59194.1    NWSH01001143    PCG72417.1    NWSH01000090    PCG79695.1    ODYU01006626    SOQ48636.1    GL888223    EGI64444.1    JTDY01004127    KOB68555.1    ADTU01003750    ADTU01025890    CAEY01000740    KQ982320    KYQ57786.1    GEDC01013050    GEDC01009962    GEDC01006526    JAS24248.1    JAS27336.1    JAS30772.1    BT126415    KB632402    AEE61379.1    ERL94969.1    KQ976720    KYM76703.1    NWSH01005813    PCG63919.1    GFDL01006355    JAV28690.1    GEYN01000194    JAV44795.1    GL888128    EGI66781.1   
Pfam
PF00106   adh_short        + More
PF00292   PAX
PF00650   CRAL_TRIO
Interpro
IPR036291   NAD(P)-bd_dom_sf        + More
IPR002347   SDR_fam       
IPR020904   Sc_DH/Rdtase_CS       
IPR036388   WH-like_DNA-bd_sf       
IPR009057   Homeobox-like_sf       
IPR001523   Paired_dom       
IPR036865   CRAL-TRIO_dom_sf       
IPR001251   CRAL-TRIO_dom       
SUPFAM
SSF51735   SSF51735        + More
SSF46689   SSF46689       
SSF52087   SSF52087       
Gene 3D
PDB
1SPX     E-value=4.33815e-25,     Score=282

Ontologies

Topology

Subcellular location
Nucleus  
Length:
250
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
17.69201
Exp number, first 60 AAs:
0.38732
Total prob of N-in:
0.44360
outside
1  -  250
 
 

Population Genetic Test Statistics

Pi
318.1057
Theta
210.221129
Tajima's D
1.616566
CLR
0.001069
CSRT
0.808809559522024
Interpretation
Uncertain

Multiple alignment of Orthologues

 
 

Gene Tree

 
 
Peptides ×
Source Sequence Identity Evalue
28556443 GIALELAPR 95.45 3e-07
28556443 SGLAAYIFTK 95.45 3e-07
28556443 NIVQQTIDAFGK 100.00 1e-04
Copyright@ 2018-2023    Any Comments and suggestions mail to:zhuzl@cqu.edu.cn   渝ICP备19006517号

渝公网安备 50010602502065号