Gene

KWMTBOMO09878

Pre Gene Modal

BGIBMGA013158

Annotation

PREDICTED:_clavesin-1-like_[Bombyx_mori]

Location

Bomo_Chr16(+):11151894-11153148      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 1.492

CDS

ATGGGCTTACTGTCCAAATTGGATATACGGAATATACAACAGTTCGTAGCTTATTTCTCTGATTCGTTATTGGCCAAATTCAATGGTCTGCACTTCATAAATACGCCCTCGTTCATGGGACGCTTGAACGCACTCACAAAAGCTTTCGACAAAAATGAGTTTATGCAGAAAGTTATCGTCCATCAAAACGGTAGCAACACATTAGAGCAGATTATTGATATTGACATCTTGCCTAAGGAAGCTGGCGGCAAGTTTAAGAGCTTGGTAGAGTGTCAACAGGAAACATTAGAAAAAATACGAACTAACGAAGATTATTTCGAAGAGGAGAACAAGAAGAGGATCGTTGAAGCACTAAGACCTGGAAAACCGAAAACCATAGCCGATTTCTTTGATAGCGTTGAGGGATCCTTCAAGAAACTGGAAATCGATTAG

Protein

MGLLSKLDIRNIQQFVAYFSDSLLAKFNGLHFINTPSFMGRLNALTKAFDKNEFMQKVIVHQNGSNTLEQIIDIDILPKEAGGKFKSLVECQQETLEKIRTNEDYFEEENKKRIVEALRPGKPKTIADFFDSVEGSFKKLEID

Uniprot

H9JUE5   H9JUQ9   H9JUE6   A0A2H1V703   A0A2A4IZQ3   A0A2H4RMT6   + More
A0A212F272   A0A437BSJ4   A0A194PT99   A0A0S2Z3U0   A0A2H4RMR3   A0A212F255   A0A2H1VNR9   A0A2H1VNP8   A0A2A4JBJ3   A0A2H4RMP1   A0A194PRP9   A0A3S2L272   A0A0N0PCB2   H9IUL0   I4DLH3   A0A0S2Z3V6   H9JUR0   A0A437B632   A0A2H1X4A9   A0A2H4RMW0   A0A2H1V2S1   A0A1W4X5F9   A0A212F242   A0A2A4J9W6   A0A310SB26   A0A139WDA0   A0A0S2Z313   A0A2H4RMR0   A0A2A4JKH3   A0A088AC27   A0A310SFZ3   A0A088AC26   A0A0C9RRA5   A0A0L7LI44   A0A0L7R9P5   A0A2S2Q3J3   A0A2A4JLN7   A0A2A3EJJ4   V9IMD6   E2A8Q9   A0A2A3EI39   A0A0C9RAD9   A0A0L7R9L5   V9IER4   A0A2A4ISL2   K7ITY7   E2BL75   A0A2S2NTT1   T1PH86   A0A1B0D1Y0   A0A2H8TCY2   A0A0J7NH54   A0A0C9RRB1   J9JNK6   A0A232EEM7   E9IA70   E2BL70   A0A0M9A4P5   H9JUQ5   A0A195CB81   A0A0L7LLE7   A0A2H8TII4   A0A2S2N8X6   A0A139WD97   A0A151WMV2   A0A212F251   A0A195ECZ2   F4WLR1   K7ITY6   A0A212F264   A0A1I8PTI0   A0A1A9X1J5   A0A1Y1L4D8   A0A026VZY9   A0A158NIC6   A0A151HZ83   A0A151JTJ8   A0A1B0B368   A0A151IIH9   K7J0H8   A0A151HZF6   A0A1B0FV49   A0A158NIC8   A0A151WMV5   W8C0A2   K7J0H5   A0A1Y1JXE4   A0A1A9XZ66   A0A1I8N3L8   A0A151JTT8   A0A151JTJ2   F4WEQ5   A0A232F895  

Pubmed

19121390    29136137    22118469    26354079    25684408    22651552    + More
18362917    19820115    26227816    20798317    20075255    28648823    21282665    21719571    28004739    24508170    21347285    24495485    25315136   

EMBL

BABH01022839    BABH01022835    BABH01022836    BABH01022838    ODYU01000988    SOQ36579.1    + More
NWSH01004847    PCG64660.1    MG434644    ATY51950.1    AGBW02010783    OWR47826.1    RSAL01000013    RVE53444.1    KQ459595    KPI95989.1    KT943550    ALQ33308.1    MG434617    ATY51923.1    OWR47825.1    ODYU01003540    SOQ42448.1    ODYU01003541    SOQ42450.1    NWSH01002010    PCG69445.1    MG434601    ATY51907.1    KPI95987.1    RSAL01000223    RVE44001.1    KQ460643    KPJ13319.1    BABH01000888    AK402141    BAM18763.1    KPI95986.1    KT943566    ALQ33324.1    BABH01022842    BABH01022843    BABH01022844    RSAL01000144    RVE45960.1    ODYU01012922    SOQ59464.1    MG434659    ATY51965.1    ODYU01000408    SOQ35137.1    OWR47818.1    NWSH01002262    PCG68761.1    KQ774368    OAD52321.1    KQ971361    KYB25884.1    KT943538    ALQ33296.1    MG434609    ATY51915.1    NWSH01001157    PCG72319.1    OAD52320.1    GBYB01009841    JAG79608.1    JTDY01001042    KOB75034.1    KQ414624    KOC67554.1    GGMS01003091    MBY72294.1    PCG72320.1    KZ288238    PBC31369.1    JR052704    AEY61761.1    GL437663    EFN70138.1    PBC31368.1    GBYB01010039    GBYB01010040    GBYB01010042    JAG79806.1    JAG79807.1    JAG79809.1    KOC67553.1    JR042329    AEY59598.1    NWSH01007421    PCG62977.1    GL448949    EFN83561.1    GGMR01007537    MBY20156.1    KA648187    AFP62816.1    AJVK01022454    GFXV01000171    MBW11976.1    LBMM01005052    KMQ91855.1    GBYB01009851    JAG79618.1    ABLF02013760    NNAY01005263    OXU16810.1    GL761987    EFZ22528.1    EFN83556.1    KQ435735    KOX77180.1    BABH01022824    KQ978009    KYM98124.1    JTDY01000701    KOB76164.1    GFXV01002129    MBW13934.1    GGMR01000597    MBY13216.1    KYB25882.1    KQ982934    KYQ49138.1    OWR47817.1    KQ979074    KYN23073.1    GL888213    EGI64859.1    OWR47816.1    GEZM01068032    JAV67250.1    KK107536    EZA49210.1    ADTU01016468    KQ976695    KYM77582.1    KQ981875    KYN34015.1    JXJN01007778    KQ977477    KYN02476.1    KYM77580.1    AJWK01010375    ADTU01016481    ADTU01016482    ADTU01016483    ADTU01016484    KYQ49137.1    GAMC01011526    JAB95029.1    GEZM01098136    JAV53982.1    KYN34011.1    KYN34006.1    GL888105    EGI67317.1    NNAY01000747    OXU26710.1   

Proteomes

UP000005204    UP000218220    UP000007151    UP000283053    UP000053268    UP000053240    + More
UP000192223    UP000007266    UP000005203    UP000037510    UP000053825    UP000242457    UP000000311    UP000002358    UP000008237    UP000092462    UP000036403    UP000007819    UP000215335    UP000053105    UP000078542    UP000075809    UP000078492    UP000007755    UP000095300    UP000091820    UP000053097    UP000005205    UP000078540    UP000078541    UP000092460    UP000092461    UP000092443    UP000095301   

PRIDE

H9JUE5    H9JUQ9    H9JUE6    H9IUL0    H9JUR0    H9JUQ5    + More

Pfam

PF00650   CRAL_TRIO        + More
PF10390   ELL

Interpro

IPR036865   CRAL-TRIO_dom_sf        + More
IPR001251   CRAL-TRIO_dom       
IPR036273   CRAL/TRIO_N_dom_sf       
IPR036291   NAD(P)-bd_dom_sf       
IPR020904   Sc_DH/Rdtase_CS       
IPR002347   SDR_fam       
IPR019464   ELL_N       

SUPFAM

SSF52087   SSF52087        + More
SSF46938   SSF46938       
SSF51735   SSF51735       

Gene 3D

3.40.525.10    

CDD

cd00170  SEC14

ProteinModelPortal

H9JUE5   H9JUQ9   H9JUE6   A0A2H1V703   A0A2A4IZQ3   A0A2H4RMT6   + More
A0A212F272   A0A437BSJ4   A0A194PT99   A0A0S2Z3U0   A0A2H4RMR3   A0A212F255   A0A2H1VNR9   A0A2H1VNP8   A0A2A4JBJ3   A0A2H4RMP1   A0A194PRP9   A0A3S2L272   A0A0N0PCB2   H9IUL0   I4DLH3   A0A0S2Z3V6   H9JUR0   A0A437B632   A0A2H1X4A9   A0A2H4RMW0   A0A2H1V2S1   A0A1W4X5F9   A0A212F242   A0A2A4J9W6   A0A310SB26   A0A139WDA0   A0A0S2Z313   A0A2H4RMR0   A0A2A4JKH3   A0A088AC27   A0A310SFZ3   A0A088AC26   A0A0C9RRA5   A0A0L7LI44   A0A0L7R9P5   A0A2S2Q3J3   A0A2A4JLN7   A0A2A3EJJ4   V9IMD6   E2A8Q9   A0A2A3EI39   A0A0C9RAD9   A0A0L7R9L5   V9IER4   A0A2A4ISL2   K7ITY7   E2BL75   A0A2S2NTT1   T1PH86   A0A1B0D1Y0   A0A2H8TCY2   A0A0J7NH54   A0A0C9RRB1   J9JNK6   A0A232EEM7   E9IA70   E2BL70   A0A0M9A4P5   H9JUQ5   A0A195CB81   A0A0L7LLE7   A0A2H8TII4   A0A2S2N8X6   A0A139WD97   A0A151WMV2   A0A212F251   A0A195ECZ2   F4WLR1   K7ITY6   A0A212F264   A0A1I8PTI0   A0A1A9X1J5   A0A1Y1L4D8   A0A026VZY9   A0A158NIC6   A0A151HZ83   A0A151JTJ8   A0A1B0B368   A0A151IIH9   K7J0H8   A0A151HZF6   A0A1B0FV49   A0A158NIC8   A0A151WMV5   W8C0A2   K7J0H5   A0A1Y1JXE4   A0A1A9XZ66   A0A1I8N3L8   A0A151JTT8   A0A151JTJ2   F4WEQ5   A0A232F895  

PDB

4CIZ     E-value=9.40066e-06,     Score=111

KEGG

101741338    no KO assigned | (RefSeq) clavesin-1-like

GO

GO:0016491   GO:0006368   GO:0008023   GO:0005215   GO:0005622   GO:0006810   GO:0006412   GO:0006414   GO:0004816   GO:0005737   GO:0006421   GO:0016155   GO:0003824  

Length:

143

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.1417

Exp number, first 60 AAs:

0.1417

Total prob of N-in:

0.06407

outside

1  -  143

 

 

Pi

309.082549

Theta

210.063674

Tajima's D

1.529813

CLR

0.599889

CSRT

0.793660316984151

Interpretation

Uncertain