SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO09871  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA013275
Annotation
PREDICTED:_LOW_QUALITY_PROTEIN:_carboxypeptidase_B-like_[Bombyx_mori]
Location in the cell
Cytoplasmic   Reliability : 1.055 Extracellular   Reliability : 1.109
 

Sequence

CDS
ATGGATGCGAGTTTTTTTGTTATTCTCGCTTTAATAAGCTCCGTGTTCGCCGGTAAACACGATATTTACTCCAGACATGCTGTCTACGGTGTTGAGCTTCGAGACCAGGATGATGTGGCGACTCTCTTCAATCTCCAGCAAAAACTGAACGTCGATATCTGGCAGCATGGTATGGCCAGAGTCAGAGACGCTGAAGTCATGGTTTCACCGGAACAGTCCAAGGAGTTCTTCGAGACTTTAGATAATAACGGCTTGAAGTATTATTTGAAAATAGAAGATGTTTCTAAAGTTCTGAAGGAGCACGAAGAGGATCTGGCGAAATGGAGGAGAAACAGAAGTAACAGAATGATCTTTCAAGATTATCCGCGTTACGCTGAGGTAAACCAATACATGGAAGAAATTGCCGCTAGATATCCGAATTTGGTGACCCTAGTCAACGCTGGGAAAAGCTTCGAGGGACGCGACATCAAATATTTGAAGATATCGACAACAAACTTCGAGGATCCCCGCAAACCAGTATACTTTATGGACGCCATGATGCACGCTCGTGAATGGGTAACGACACCAGTGACGATATACTCAGTCTTCAGACTCGTAGAGAACTTGAGAGATGATGAGAGGGATCTGCTTGAAGACATCGATTGGATCATTTTGCCTATTGTCAATCCCGATGGCTATGAGTTCAGTCACACTGACGATCGTCTTTGGCGTCGCACCCGTTCCGTCAACCTAGAAGTCAGTACTACCTGCTTTGGAGTCGACCCGAATAGGAACTTTGACGTCGACTTCAATACCTTAGGGGTCTCCAGCGACCCGTGCTCCCAAACATATCCAGGGGTAGCGCCGTTCTCCGAAGCAGAAACGAGGATTATCAGGGATATCTTCTTGAAGTACTTGCCGCGTATACAGCTGTACAATGATATTCATAGCCATGGAAACTATGTTCTGTTCGGTTTTGGAAACAACACTTTGACGCCTAATGTGGCACAGCTGCATCATGTGGCTGCCGCGATGGGCGCGGCCATGGACGCTGTCAAATTACCCGAAGCCGGATATTATCTGATCGGTAACAGCGGTCTGGTGCTATACAAAACTTCTGGATGCGGCCAGGATTACGGTCAGGTGAGAGCATACATTAGATAA
Protein
MDASFFVILALISSVFAGKHDIYSRHAVYGVELRDQDDVATLFNLQQKLNVDIWQHGMARVRDAEVMVSPEQSKEFFETLDNNGLKYYLKIEDVSKVLKEHEEDLAKWRRNRSNRMIFQDYPRYAEVNQYMEEIAARYPNLVTLVNAGKSFEGRDIKYLKISTTNFEDPRKPVYFMDAMMHAREWVTTPVTIYSVFRLVENLRDDERDLLEDIDWIILPIVNPDGYEFSHTDDRLWRRTRSVNLEVSTTCFGVDPNRNFDVDFNTLGVSSDPCSQTYPGVAPFSEAETRIIRDIFLKYLPRIQLYNDIHSHGNYVLFGFGNNTLTPNVAQLHHVAAAMGAAMDAVKLPEAGYYLIGNSGLVLYKTSGCGQDYGQVRAYIR

Summary

Similarity
Belongs to the G-protein coupled receptor 1 family.
EMBL
BABH01022852    BABH01022853    BABH01022854    BABH01022855    BABH01022856    ODYU01000433    + More
SOQ35191.1    KQ461189    KPJ07296.1    KQ459595    KPI95994.1    GDQN01001497    JAT89557.1    KPJ07295.1    AGBW02007655    OWR54814.1    GDQN01003319    JAT87735.1    GDQN01005910    JAT85144.1    KQ460778    KPJ12425.1    GU325786    ADB96010.1    EF600060    ABU98625.1    NWSH01002977    PCG67157.1    KQ459585    KPI98270.1    AJ626863    CAF25190.1    AY512674    AAS82583.1    KPI98271.1    AJ005177    CAA06418.1    AJ005178    CAA06419.1    BABH01022994    GU323795    ADA83700.1    BABH01022992    ODYU01007689    SOQ50701.1    RSAL01000278    RVE43076.1    NWSH01002042    PCG69323.1    KPI98273.1    AGBW02009192    OWR51432.1    BABH01022995    AY512675    AAS82584.1    RSAL01000517    RVE41479.1    BABH01024959    BABH01024960    AM085495    CAJ30028.1    JX865781    AGL42356.1    BABH01022991    SOQ50698.1    KPJ12423.1    ODYU01005225    SOQ45875.1    KQ459604    KPI92215.1    AJ005176    CAA06417.1    AJ626862    CAF25189.2    KPJ12422.1    RVE43075.1    FJ210817    ACN69214.1    KQ460045    KPJ18276.1    ODYU01006127    SOQ47708.1    AGBW02010665    OWR48083.1    PCG67156.1    EU924507    ACH82086.1    GDQN01002013    JAT89041.1    AY512678    AAS82587.1    ODYU01003862    SOQ43155.1    AY512677    AAS82586.1    OWR51430.1    ODYU01009870    SOQ54577.1    GALX01003006    JAB65460.1    JXJN01026429    BT127444    KB631870    AEE62406.1    ERL86847.1    JTDY01004612    KOB67948.1    JRES01000080    KNC34299.1    CCAG010004976    EZ422848    ADD19124.1    AY590494    AY593982    AAT36735.1    CH477229    EAT46987.1    CH480817    EDW50838.1    CM000363    CM002912    EDX09570.1    KMY98094.1    AE014296    AY051552    AAF50560.2    AAK92976.1    GAPW01001697    JAC11901.1    JXUM01000712    FX985400    BAX07413.1    OWR51431.1    OUUW01000002    SPP77183.1    AJWK01003990    HM543508    AEI58659.1    UFQS01000637    UFQT01000637    SSX05638.1    SSX25997.1    CH379069    EAL30738.1    CH963847    EDW73136.1    UFQT01000127    SSX20529.1    AY593983    AAT36736.1    CH954178    EDV50474.1    CM000159    EDW93756.1    GFDF01005234    JAV08850.1    HM543495    AEI58646.1    HM543506    AEI58657.1    HM543497    AEI58648.1    HM543496    AEI58647.1    HM543512    AEI58663.1    HM543493    AEI58644.1    GFDF01005765    JAV08319.1   
Pfam
PF02244   Propep_M14        + More
PF00246   Peptidase_M14
PF00001   7tm_1
Interpro
IPR000834   Peptidase_M14        + More
IPR036990   M14A-like_propep       
IPR003146   M14A_act_pep       
IPR034223   IGCP-like_CPD       
IPR017452   GPCR_Rhodpsn_7TM       
IPR000276   GPCR_Rhodpsn       
Gene 3D
PDB
1JQG     E-value=2.35007e-67,     Score=649

Ontologies

Topology

SignalP
Position:   1 - 17,         Likelihood:  0.963013
 
 
Length:
380
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.43345
Exp number, first 60 AAs:
0.37712
Total prob of N-in:
0.02029
outside
1  -  380
 
 

Population Genetic Test Statistics

Pi
290.429803
Theta
200.843928
Tajima's D
1.486643
CLR
0.048591
CSRT
0.781110944452777
Interpretation
Uncertain

Multiple alignment of Orthologues

 
 

Gene Tree

 
 
Peptides ×
Source Sequence Identity Evalue
28556443 LPEAGYYLIGNSGLVLYK 100.00 2e-06
28556443 ISTTNFEDPR 100.00 2e-06
28556443 ISTTNFEDPR 100.00 2e-06
28556443 VAQLHHVAAAMGAAMDAVK 100.00 0.003
28556443 YNIMAVR 100.00 0.009
28556443 VSLENDEKEYHLFR 100.00 0.018
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