SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO09869  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA013276
Annotation
PREDICTED:_LOW_QUALITY_PROTEIN:_carboxypeptidase_B-like_[Bombyx_mori]
Location in the cell
Cytoplasmic   Reliability : 1.153
 

Sequence

CDS
ATGGATACGAGCTTTTTTGTTATTCTCGCTTTAGTAAGCTCCGTGTTCGCCGGTAAACACGATATTTACTCGAGACATGCTGTCTACGGTGTTGAGCTTCGAGACCAGGATGATGTGGCGACTCTCTTCAATCTCCAGCAAAAACTGAACGTCGATATCTGGGAGCACGGTATGGCCAGAGTCAGAGACGCTGAAGTCATGGTCTCACCGGAGCAGTCCAAGGAGTTCTTCGAGACTTTAGATAATAACGGTTTGAAGTATTATTTGAAAATAGAAGATGTTTCTAAAGTTCTGAAGGAGCACGAAGAGGATCTGGCGAAATGGAGGAGAAACAGAAATAACAGAATGATCTTTCAAGATTATCCGCGTTACGCTGAGGTAAACCAATACATGGAAGAAATTGCCGCTAGATATCCAAATTTGGTGACCCTAGTCAACGCAGGGAAAAGCTTCGAGGGGCGAGACATCAAATATTTGAAGATATCGACTACAAACTTCGAGGATCCTCGCAAACCAGTTTACTTCATGGATGGCATGATGCACGCTCGTGAATGGGTCACGACTCCAGTCACGATGTACTCAATCTTCAGGCTCGTAGAGAACTTGAGAGATAATGAGAGGGATCTGCTTGAGGACATCGATTGGATCATTTTGCCTATCGTCAATCCTGATGGCTATGAGTTTAGCCATACCGACGACCGTCTTTGGCGTCGCACCCGTTCCGTCAACCTAGAAGTCAGTACTACCTGCTTTGGAGTCGACGCGAATAGGAACTTTGATGTCGACTTCAATACCCTAGGGGTATCCAGCGACCCGTGCTCCCAGACGTACCCAGGGGTCGCGCCGTTCTCCGAACCAGAAACAAGAATAGTCCGGGACATCCTCTCGAAGTACTTGCCACGTATACAGCTTTACAATAACATTCATAGCCATGGAAACTATGTTTTGTTCGGTTTTGGAAACAACACTTTGACACCTAATGTGGCGCAGCTGCATCATGTGGCTGCCGCGATGGGCGCTGCCATGGACGCTGTCAAATTACCCGAAGCCGGATATTATCTGATCGGTAACAGCGGTCTGGTGCTATACAGAACTTCTGGAAGCGCCCAGGATTACGGTCAGCATGTTGGTGTCCCCTTCTCGTACACGCTGGAGCTGCCTGGATACGGCTACGACTTCAGGGTACCGCCTTCTTTCATCGATCACATCAACGAGGAGACCTGGAAGGGAATCGCCATCACTGCTCGCCTTTCAAAGATTCACTACCGCAGCAGAACTAGTCGACAATGA
Protein
MDTSFFVILALVSSVFAGKHDIYSRHAVYGVELRDQDDVATLFNLQQKLNVDIWEHGMARVRDAEVMVSPEQSKEFFETLDNNGLKYYLKIEDVSKVLKEHEEDLAKWRRNRNNRMIFQDYPRYAEVNQYMEEIAARYPNLVTLVNAGKSFEGRDIKYLKISTTNFEDPRKPVYFMDGMMHAREWVTTPVTMYSIFRLVENLRDNERDLLEDIDWIILPIVNPDGYEFSHTDDRLWRRTRSVNLEVSTTCFGVDANRNFDVDFNTLGVSSDPCSQTYPGVAPFSEPETRIVRDILSKYLPRIQLYNNIHSHGNYVLFGFGNNTLTPNVAQLHHVAAAMGAAMDAVKLPEAGYYLIGNSGLVLYRTSGSAQDYGQHVGVPFSYTLELPGYGYDFRVPPSFIDHINEETWKGIAITARLSKIHYRSRTSRQ

Summary

Similarity
Belongs to the G-protein coupled receptor 1 family.
EMBL
BABH01022854    BABH01022855    BABH01022856    BABH01022852    BABH01022853    ODYU01000433    + More
SOQ35191.1    KQ461189    KPJ07296.1    KQ459595    KPI95994.1    GDQN01001497    JAT89557.1    KPJ07295.1    AGBW02007655    OWR54814.1    ODYU01003089    SOQ41402.1    GDQN01003319    JAT87735.1    GDQN01005910    JAT85144.1    NWSH01002977    PCG67157.1    GU325786    ADB96010.1    EF600060    ABU98625.1    BABH01022994    KQ460778    KPJ12425.1    AJ626863    CAF25190.1    AY512674    AAS82583.1    KQ459585    KPI98270.1    RSAL01000517    RVE41479.1    AM085495    CAJ30028.1    KPI98273.1    BABH01022992    AJ005177    CAA06418.1    GU323795    ADA83700.1    ODYU01005225    SOQ45875.1    AJ005178    CAA06419.1    BABH01024959    BABH01024960    KPJ12423.1    BABH01022991    AY512675    AAS82584.1    RSAL01000278    RVE43076.1    KPJ12422.1    ODYU01007689    SOQ50701.1    KQ459604    KPI92215.1    FJ210817    ACN69214.1    BABH01022995    NWSH01002042    PCG69323.1    KPI98271.1    JX865781    AGL42356.1    KQ460045    KPJ18276.1    AGBW02009192    OWR51432.1    AJ626862    CAF25189.2    PCG67156.1    RVE43075.1    AJ005176    CAA06417.1    AGBW02010665    OWR48083.1    JTDY01005092    KOB67379.1    ODYU01006127    SOQ47708.1    SOQ50698.1    SOQ45873.1    EU924507    ACH82086.1    AY512678    AAS82587.1    AY512677    AAS82586.1    JTDY01004612    KOB67948.1    OWR51430.1    ODYU01003862    SOQ43155.1    GDQN01002013    JAT89041.1    JXJN01026429    KA646464    AFP61093.1    KPJ12424.1    GANO01000996    JAB58875.1    AY593983    AAT36736.1    CCAG010004976    EZ422848    ADD19124.1    AE014296    AY051552    AAF50560.2    AAK92976.1    OWR51431.1    JRES01000080    KNC34299.1    CH480817    EDW50838.1    CM000363    CM002912    EDX09570.1    KMY98094.1    CH916366    EDV97049.1    KPI98272.1    CH954178    EDV50474.1    GFDG01001145    JAV17654.1    CM000159    EDW93756.1    CH963847    EDW73136.1    GALX01003006    JAB65460.1    CH379069    EAL30738.1    CH902618    EDV40704.1    UFQS01000637    UFQT01000637    SSX05638.1    SSX25997.1    UFQT01000127    SSX20529.1    CH940647    EDW68999.1    CP012525    ALC43322.1    ATLV01024091    KF707634    KE525349    AHC32036.1    KFB50550.1    CH933809    EDW17770.1   
Pfam
PF00246   Peptidase_M14        + More
PF02244   Propep_M14
PF00001   7tm_1
Interpro
IPR036990   M14A-like_propep        + More
IPR003146   M14A_act_pep       
IPR000834   Peptidase_M14       
IPR034223   IGCP-like_CPD       
IPR017452   GPCR_Rhodpsn_7TM       
IPR000276   GPCR_Rhodpsn       
Gene 3D
PDB
1JQG     E-value=3.22672e-89,     Score=838

Ontologies

Topology

SignalP
Position:   1 - 17,         Likelihood:  0.958436
 
 
Length:
429
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.31975
Exp number, first 60 AAs:
0.2953
Total prob of N-in:
0.01647
outside
1  -  429
 
 

Population Genetic Test Statistics

Pi
329.858106
Theta
199.845829
Tajima's D
2.209471
CLR
0.027047
CSRT
0.913604319784011
Interpretation
Uncertain

Multiple alignment of Orthologues

 
 

Gene Tree

 
 
Peptides ×
Source Sequence Identity Evalue
28556443 VPPSFIDHINEETWK 100.00 5e-05
28556443 VAQLHHVAAAMGAAMDAVK 100.00 5e-05
28556443 LPEAGYYLIGNSGLVLYK 100.00 5e-05
28556443 KPVYFMDAMMHAR 100.00 5e-05
28556443 YNIMAVR 100.00 0.008
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