SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO09830  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA013134
Annotation
cell_division_cycle_2_[Bombyx_mori]
Full name
Cyclin-dependent kinase 1      
Alternative Name
Cell division control protein 2 homolog
Cell division protein kinase 1
p34 protein kinase
Location in the cell
Cytoplasmic   Reliability : 2.477
 

Sequence

CDS
ATGGATGATTTCTTAAAGATAGAAAAGATCGGCGAAGGTACTTACGGTGTCGTTTACAAAGGAAAAAACAAAATAACTGGTCAATTTGTAGCCATGAAAAAAATTCGCTTGGAGTCCGAAGACGAAGGCATACCATCCACGGCAATAAGAGAAATATCTCTACTTAAAGAACTGAACCACCCTAATATTGTCAAGTTGGAGGATGTCCTGATGGAAGAGTCGCGACTTTACTTAATCTTCGAATTCCTCTCTATGGACTTGAAGAAATATATGGACTCCCTTGGTTCTGGAAAGTTCATGGACCCATCTGTAGTTAAGAGCTATCTATATCAAATCAACAATGCCATCTTGTACTGTCACCAACGACGGATCCTGCATCGAGATCTCAAACCACAGAACCTACTCATCGACAAGACTGGAATCATTAAAGTTGCAGATTTTGGTCTTGGTCGAGCATTCGGTGTTCCAGTGCGGGTCTACACACATGAAGTTGTCACATTGTGGTACAGGGCTCCTGAGGTCTTACTAGGAAGTCAAAGATACTCTTGTCCAATTGATATATGGTCAGTTGGCTGTATATTCTCTGAGATGTCATCAAAGAAGCCACTGTTTCAAGGAGACTCTGAAATTGATCAACTCTTCCGCATTTTCAGAATGCTAAGAACGCCAACAGAAGAGATATGGCCTGGTGTTTCTCTCCTACCAGACTACAAGCCAACCTTCCCGAACTGGAACACGTACAATCTGCACAATCATGTACAAAACCTAGACGAAGTGGGCATGGATTTGTTACAAAAGATGTTAGTCTACGATCCGGTTAAAAGAATATCCGCGAAGGACGCGCGACGACACAAGTACTTTAGAGACGTGAAACTACCTCCCGGACTGACAGTGCACGACGCTTACATCAGAGTGACGCCAGAATACCCATACGACACGGATTCTGTTCAAAGTGTATAG
Protein
MDDFLKIEKIGEGTYGVVYKGKNKITGQFVAMKKIRLESEDEGIPSTAIREISLLKELNHPNIVKLEDVLMEESRLYLIFEFLSMDLKKYMDSLGSGKFMDPSVVKSYLYQINNAILYCHQRRILHRDLKPQNLLIDKTGIIKVADFGLGRAFGVPVRVYTHEVVTLWYRAPEVLLGSQRYSCPIDIWSVGCIFSEMSSKKPLFQGDSEIDQLFRIFRMLRTPTEEIWPGVSLLPDYKPTFPNWNTYNLHNHVQNLDEVGMDLLQKMLVYDPVKRISAKDARRHKYFRDVKLPPGLTVHDAYIRVTPEYPYDTDSVQSV

Summary

Description
Plays a key role in the control of the eukaryotic cell cycle (PubMed:2120044, PubMed:15581871). It is required in higher cells for entry into S-phase and mitosis (PubMed:2120044, PubMed:15581871, PubMed:29746464). In embryos, promotes the release of Rif1 from chromatin during mid-blastula transition (PubMed:29746464). p34 is a component of the kinase complex that phosphorylates the repetitive C-terminus of RNA polymerase II (PubMed:2120044).
Catalytic Activity
ATP + L-seryl-[protein] = ADP + H(+) + O-phospho-L-seryl-[protein]
ATP + L-threonyl-[protein] = ADP + H(+) + O-phospho-L-threonyl-[protein]
[DNA-directed RNA polymerase] + ATP = ADP + H(+) + phospho-[DNA-directed RNA polymerase]
Subunit
Forms a stable but non-covalent complex with a regulatory subunit and with a cyclin. Component of the Frs-CycA-Cdk1 complex composed of Cdk1, CycA and Z600 (PubMed:17431409).
Similarity
Belongs to the protein kinase superfamily.
Belongs to the protein kinase superfamily. CMGC Ser/Thr protein kinase family. CDC2/CDKX subfamily.
Keywords
ATP-binding   Cell cycle   Cell division   Complete proteome   Kinase   Mitosis   Nucleotide-binding   Nucleus   Phosphoprotein   Reference proteome   Transferase  
Feature
chain  Cyclin-dependent kinase 1
EMBL
BABH01038541    D85134    BAA21483.1    NWSH01000035    PCG80443.1    KQ461178    + More
KPJ07774.1    RSAL01000051    RVE50217.1    FJ157364    ACH95804.1    AGBW02010783    OWR47795.1    GAIX01006309    JAA86251.1    PCG80444.1    KK853042    KDR12146.1    FX985780    BBA93667.1    NNAY01001030    OXU25419.1    NEVH01009070    PNF33917.1    PNF33916.1    KQ760801    OAD58957.1    KZ288315    PBC28324.1    GECZ01012673    JAS57096.1    GECU01019094    GECU01014922    JAS88612.1    JAS92784.1    JXJN01020906    GDHF01025580    JAI26734.1    GAKP01006114    JAC52838.1    CCAG010011279    LBMM01000393    KMQ98492.1    KK107182    QOIP01000003    EZA56012.1    RLU24703.1    GAMC01016742    GAMC01016739    JAB89816.1    ATLV01015028    KE524999    KFB39955.1    GL765434    EFZ16248.1    CVRI01000020    CRK90881.1    DS231825    EDS28189.1    JRES01000469    KNC30995.1    GDIP01025071    GDIQ01019885    GDIQ01006945    JAM78644.1    JAN74852.1    GFDL01015409    JAV19636.1    KQ971344    EFA05799.2    GDIQ01192866    JAK58859.1    CH940671    EDW58181.1    GL449898    EFN81850.1    JXUM01001773    KQ560128    KXJ84300.1    GL732601    EFX72219.1    CH477522    EAT39587.1    CH902620    EDV32331.1    CH916372    EDV99454.1    GDIQ01243660    JAK08065.1    GDIQ01028216    JAN66521.1    GEDC01000532    GEDC01000299    JAS36766.1    JAS36999.1    CH954177    EDV58529.1    CP012523    ALC39191.1    GDIP01022267    JAM81448.1    CM002910    KMY89515.1    CM000157    EDW88814.1    CH480818    EDW52424.1    FM245388    FM245389    FM245390    FM245391    FM245392    FM245393    FM245394    FM245395    FM245396    FM245397    FM245398    CAR93314.1    CAR93315.1    CAR93316.1    CAR93317.1    CAR93318.1    CAR93319.1    CAR93320.1    CAR93321.1    CAR93322.1    CAR93323.1    CAR93324.1    X57485    X57496    S66801    S66804    S66805    S66807    S66810    AM294319    AM294320    AM294321    AM294322    AM294323    AM294324    AM294325    AM294326    AM294327    AM294328    AM294329    AE014134    AY061450    KQ982717    KYQ51727.1    ADTU01004932    AM294330    CAL26260.1    ADMH02002093    ETN59296.1    KQ976511    KYM82589.1    CH479180    EDW28352.1    MF432981    ATL75332.1    HQ656803    AEJ91557.1    GL888175    EGI66007.1    KQ981856    KYN34686.1    GBBI01002612    JAC16100.1    ACPB03004679    KQ980791    KYN13117.1    CH933807    EDW13559.1    HQ457439    ADZ23998.1    PNF33918.1    KQ434999    KZC13377.1    AXCM01007160    KU866455    KY484157    AMP81926.1    AUZ97322.1    AXCN02000852    BT126967    AEE61929.1    GDRN01055977    GDRN01055976    JAI65892.1    FJ210468    ACI43009.1    AAAB01008797    EAA03621.4    APCN01004111    KQ977580    KYN01800.1    FJ015041    ACH88358.1    NEDP02002059    OWF51798.1   
Pfam
PF00069   Pkinase        + More
PF15477   SMAP
Interpro
IPR017441   Protein_kinase_ATP_BS        + More
IPR011009   Kinase-like_dom_sf       
IPR008271   Ser/Thr_kinase_AS       
IPR000719   Prot_kinase_dom       
IPR028124   SMAP_dom       
SUPFAM
SSF56112   SSF56112       

Ontologies

Topology

Subcellular location
Nucleus  
Length:
319
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00353
Exp number, first 60 AAs:
0
Total prob of N-in:
0.01544
outside
1  -  319
 
 

Population Genetic Test Statistics

Pi
241.660259
Theta
194.339088
Tajima's D
0.441669
CLR
1.030029
CSRT
0.499675016249188
Interpretation
Uncertain

Multiple alignment of Orthologues

 
 

Gene Tree

 
 
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