Gene

KWMTBOMO09825

Pre Gene Modal

BGIBMGA013138

Annotation

PREDICTED:_armadillo_repeat-containing_protein_2_[Bombyx_mori]

Location

Bomo_Chr16(-):9882821-9888018      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 1.269 Extracellular   Reliability : 1.89

CDS

ATGAGTCTCCTGGAGCTCTCCGAAGCGTTATCCAATCGCGGATGTGGCACGAGTCGCACACTCGCTCTCATTGAAGCGGTACAGAAACTGGTGGATATCAATGTACCTGCAAGTAGTCTACGGGAATTAGTGCTGCGCTCACTGTATACTCATATCGATAGTGAAGATGAACAGGTTCTTGTGGCGATCGCTAGAGCTATGCTCACGATGCGTGTAACTGGAAGTCATTTGGCGGCCGCTTGCAAATTGGTCTTCAAGATAGCGAAGAACGATAATAACGATCACTTCTTTCACGACACTAATTTACTCGAGCTGTGCGTTGAGGGGTGGGGTCGAGCGGAGCCGGTCCGCGAGGCGGAGTGCTGTGTGTACGGGGCGGGGGCGCTGCGGGTGCTCTCGCTGGTGCCGACGCTCGCGACGCGCGCTCTGCGGGCCGGAGCCCTACATCTAGCTGCCCTACATCTGAAGATACTGAACAATGCTAAATCTGAGAGTCCGCGGTCGCTGTCTGATCAGTCCACGCACGCACTGTTCCAAGTGACAGGAGCGCTGCGTAACCTCGCGGCGGCCGGCGAGCGCGAATTCGTCCCGAGCGGCGCGCTCGCCGAACTGCTCGCTGCCCTGCTACTGCACACCGACAGAGACGTGCTCACGAATGTGGCTCGTTGTCTCAGGTAA

Protein

MSLLELSEALSNRGCGTSRTLALIEAVQKLVDINVPASSLRELVLRSLYTHIDSEDEQVLVAIARAMLTMRVTGSHLAAACKLVFKIAKNDNNDHFFHDTNLLELCVEGWGRAEPVREAECCVYGAGALRVLSLVPTLATRALRAGALHLAALHLKILNNAKSESPRSLSDQSTHALFQVTGALRNLAAAGEREFVPSGALAELLAALLLHTDRDVLTNVARCLR

Uniprot

A0A437BIH0   A0A2H1WFQ5   A0A194PPZ6   A0A0N1PGM9   A0A212F298   A0A2H1VM48   + More
A0A2J7RJD9   A0A1B6GDQ4   A0A1B6HE50   A0A067RFM5   U4UP76   N6UIL1   A0A1B6LEU6   A0A1B6LFA0   A0A139WKZ2   A0A139WKC3   A0A1B6CHS7   A0A1Y1L9N7   A0A1Y1L9N3   A0A1W4XD46   A0A1W4XCS2   A0A1W4XN67   T1IC84   A0A146LPT6   A0A182NN80   A0A182M076   A0A182WAT0   Q7Q2N0   A0A084VZV1   A0A182KHK2   A0A182TBU1   A0A182QIB9   A0A182R2T2   A0A1S4EV61   A0A182LI98   Q17Q03   A0A182YI58   A0A182P618   A0A182HX04   A0A182FLT3   A0A2H8TMG1   A0A2R7W2R5   J9JYM2   C3YX73   A0A2S2PP42   A0A1J1J0R2   A0A444SSP7   A0A401P583   A0A401SCR7   V4B172   B3RWE8   A0A3R7MJ59   A0A369S4R0   A0A3Q2H7V0   G3SX90   F6SDW7   A0A3S1BWZ9   A0A286ZL72   A0A287B4H9   G1KEZ1   A0A1L8G980  

Pubmed

26354079    22118469    24845553    23537049    18362917    19820115    + More
28004739    26823975    12364791    24438588    17510324    20966253    25244985    18563158    30297745    23254933    18719581    30042472    19892987    27762356   

EMBL

RSAL01000051    RVE50221.1    ODYU01008377    SOQ51915.1    KQ459602    KPI93205.1    + More
KQ461178    KPJ07758.1    AGBW02010783    OWR47841.1    ODYU01003041    SOQ41324.1    NEVH01002992    PNF40949.1    GECZ01009223    JAS60546.1    GECU01034743    JAS72963.1    KK852716    KDR17838.1    KB632303    ERL91825.1    APGK01018912    APGK01018913    KB740085    ENN81560.1    GEBQ01017762    JAT22215.1    GEBQ01017612    JAT22365.1    KQ971326    KYB28497.1    KYB28498.1    GEDC01024282    GEDC01020040    JAS13016.1    JAS17258.1    GEZM01061557    JAV70373.1    GEZM01061558    JAV70372.1    ACPB03017885    GDHC01009867    JAQ08762.1    AXCM01011722    AAAB01008968    EAA13310.4    ATLV01018966    KE525256    KFB43495.1    AXCN02001897    CH477188    EAT48791.1    APCN01006859    GFXV01002663    MBW14468.1    KK854272    PTY14043.1    ABLF02023650    GG666562    EEN55091.1    GGMR01018538    MBY31157.1    CVRI01000064    CRL05014.1    SAUD01024491    RXG56427.1    BFAA01005868    GCB68305.1    BEZZ01000195    GCC28206.1    KB200559    ESP01061.1    DS985245    EDV25124.1    QCYY01003495    ROT63090.1    NOWV01000065    RDD41898.1    RQTK01000023    RUS90870.1    AEMK02000001    CM004474    OCT80393.1   

Proteomes

UP000283053    UP000053268    UP000053240    UP000007151    UP000235965    UP000027135    + More
UP000030742    UP000019118    UP000007266    UP000192223    UP000015103    UP000075884    UP000075883    UP000075920    UP000007062    UP000030765    UP000075881    UP000075901    UP000075886    UP000075900    UP000075882    UP000008820    UP000076408    UP000075885    UP000075840    UP000069272    UP000007819    UP000001554    UP000183832    UP000288706    UP000288216    UP000287033    UP000030746    UP000009022    UP000283509    UP000253843    UP000002281    UP000007646    UP000271974    UP000008227    UP000001646    UP000186698   

Pfam

PF00514   Arm        + More
PF09995   DUF2236
PF07776   zf-AD
PF00181   Ribosomal_L2
PF03947   Ribosomal_L2_C
PF00096   zf-C2H2

Interpro

IPR016024   ARM-type_fold        + More
IPR011989   ARM-like       
IPR038905   ARMC2       
IPR000225   Armadillo       
IPR018713   DUF2236       
IPR012340   NA-bd_OB-fold       
IPR022669   Ribosomal_L2_C       
IPR012934   Znf_AD       
IPR014722   Rib_L2_dom2       
IPR013087   Znf_C2H2_type       
IPR002171   Ribosomal_L2       
IPR022666   Rbsml_prot_L2_RNA-bd_dom       
IPR036236   Znf_C2H2_sf       
IPR008991   Translation_prot_SH3-like_sf       

SUPFAM

SSF48371   SSF48371        + More
SSF50104   SSF50104       
SSF57667   SSF57667       
SSF50249   SSF50249       

Gene 3D

1.25.10.10     2.30.30.30    

ProteinModelPortal

A0A437BIH0   A0A2H1WFQ5   A0A194PPZ6   A0A0N1PGM9   A0A212F298   A0A2H1VM48   + More
A0A2J7RJD9   A0A1B6GDQ4   A0A1B6HE50   A0A067RFM5   U4UP76   N6UIL1   A0A1B6LEU6   A0A1B6LFA0   A0A139WKZ2   A0A139WKC3   A0A1B6CHS7   A0A1Y1L9N7   A0A1Y1L9N3   A0A1W4XD46   A0A1W4XCS2   A0A1W4XN67   T1IC84   A0A146LPT6   A0A182NN80   A0A182M076   A0A182WAT0   Q7Q2N0   A0A084VZV1   A0A182KHK2   A0A182TBU1   A0A182QIB9   A0A182R2T2   A0A1S4EV61   A0A182LI98   Q17Q03   A0A182YI58   A0A182P618   A0A182HX04   A0A182FLT3   A0A2H8TMG1   A0A2R7W2R5   J9JYM2   C3YX73   A0A2S2PP42   A0A1J1J0R2   A0A444SSP7   A0A401P583   A0A401SCR7   V4B172   B3RWE8   A0A3R7MJ59   A0A369S4R0   A0A3Q2H7V0   G3SX90   F6SDW7   A0A3S1BWZ9   A0A286ZL72   A0A287B4H9   G1KEZ1   A0A1L8G980  

KEGG

101746625    no KO assigned | (RefSeq) armadillo repeat-containing protein 2

GO

GO:0016021   GO:0003735   GO:0005634   GO:0006412   GO:0008270   GO:0005840   GO:0003676   GO:0005488   GO:0046872   GO:0006468   GO:0003995   GO:0008565   GO:0015031   GO:0009258   GO:0016155   GO:0003824  

PANTHER

PTHR21356  

Length:

225

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.05147

Exp number, first 60 AAs:

0.00093

Total prob of N-in:

0.00693

outside

1  -  225

 

 

Pi

340.848915

Theta

241.654505

Tajima's D

1.63291

CLR

0.210279

CSRT

0.811009449527524

Interpretation

Uncertain