Gene

KWMTBOMO09817  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA013140

Annotation

short-chain_specific_acyl-CoA_dehydrogenase_[Agrotis_segetum]

Location

Bomo_Chr16(-):9792240-9795198      View in EpiBrowser

Location in the cell

Mitochondrial   Reliability : 2.715

CDS

ATGTTTATGCCTTTCTCTAAAACCATTCAAGCTTTAGGTCAATCAGTCACTAGACATACAAGATGCATCGCTTCTTTATCAGCATTATCTGAAGATTATCAGATGTTGCAAAAAACATGCCGTGATTTTGCGGAAGGCGAACTTAAGCCCAATGCTGCTAAATACGATCGAGATCATTTATATCCCGGAGAAGCAATTAAAAAATTAGGAGAACTAGGCTTAATGGCTATAGCGGTACCGGAAAAATGGGGAGGTGCAGGCTTAGACTATTTAGCATACGCTATAGCTCTCGAAGAGATATCCAGAGGTTGTGCTTCAGCTGGTGTTATAATGTCAGTGAATAACTCCTTATATCTTGGACCGCTGTCTCATTGGGGCACTGACAAACAAAAAGAACAGTTTGTAACTCCTTTTTGTACTGGTGATCCTGTGGGCTGCTTTGCTCTATCAGAACCCGGTAATGGATCAGATGCAGGAGCCGCCTCCACTACAGCAAAAGATGCGGGTGACAAGTGGATTCTGAATGGAACTAAATGTTGGATTACCAATGGATACGAGAGCAAAGCATCAGTAGTTTTTGCTACAACTGATAAGAGTTTAAAACATAAAGGTATTTCAGCATTTGTAGTTCCAAAACCTATAAAGGGTCTTGAATTAGGGAAAAAAGAAGATAAACTAGGTATAAGGGGGAGTTCAACTTGCTCCCTGATATATGAAGACTGTGAAATTCCCAAAGAGAACATCCTGGGTGAACCGGGGTTTGGATTCAAGATAGCTATGATGACTCTAGATGCGGGGAGAATTGGTATTGCTTCACAAGCTTTAGGTATAGCTCAGGCTTCACTGGATGTGGCAATAGAATATGCTTCGAAACGCATTGCTTTTGGCAAACCAATATTGAAATTGCAAGCTATTCAAAATAAATTAGCTGAAATGGCGCTCCGTCTTGAATCTGCACGCTTGCTTACATGGCGAGCGGCCTGGCTGAAGGACAACAAAAATCCCTATACTAAGGAGGCAGCAATGGCCAAGTTGGCTGCATCAGAGGCTGCTACGTTTTTATCACACCAATGTATCCAGATTCTTGGAGGAATGGGTTATGTATCAGATATGCCAGCAGAACGACATTACCGCGACGCTCGCATCACTGAGATTTACGAGGGCACCAGCGAAATACAAAGACTGGTTATAGCAGGACAACTGATCAAGGAATACGGACTGAATTAG

Protein

MFMPFSKTIQALGQSVTRHTRCIASLSALSEDYQMLQKTCRDFAEGELKPNAAKYDRDHLYPGEAIKKLGELGLMAIAVPEKWGGAGLDYLAYAIALEEISRGCASAGVIMSVNNSLYLGPLSHWGTDKQKEQFVTPFCTGDPVGCFALSEPGNGSDAGAASTTAKDAGDKWILNGTKCWITNGYESKASVVFATTDKSLKHKGISAFVVPKPIKGLELGKKEDKLGIRGSSTCSLIYEDCEIPKENILGEPGFGFKIAMMTLDAGRIGIASQALGIAQASLDVAIEYASKRIAFGKPILKLQAIQNKLAEMALRLESARLLTWRAAWLKDNKNPYTKEAAMAKLAASEAATFLSHQCIQILGGMGYVSDMPAERHYRDARITEIYEGTSEIQRLVIAGQLIKEYGLN

Cofactor

FAD

Similarity

Belongs to the acyl-CoA dehydrogenase family.

Uniprot

H9JUC7   A0A068FL57   A0A2A4K8V0   A0A2H1V0Y7   A0A3S2LN21   A0A0N1IPD1   + More
S4P5F9   A0A212F271   A0A194QI36   V5I817   D2A4V5   A0A182XBG8   A0A182I0A8   A0A182MPT9   A0A182VKN3   N6TTA1   A0A182TPS4   Q7PYI1   A0A182JR73   A0A182KLX6   Q17DJ8   A0A182RXK0   A0A182PQV0   A0A182F884   A0A2M4AVD0   A0A1B6FF77   A0A1S4F6S3   A0A182Q2T6   A0A0L0CPT7   W5JE72   A0A182GT73   B0WWP9   A0A182VR31   A0A1I8N4U0   A0A182JK17   A0A1I8P8R5   A0A336MX34   A0A182YG93   A0A2M4BR67   A0A1Y9H2B2   A0A336MN59   B4NGE2   A0A1Q3F8Y5   Q8I184   A0A0A9XD73   A0A3B0K6K4   A0A084VS48   A0A0K8TFV8   B4M4S1   T1PP05   A0A1B0D978   B4IHR3   Q294T1   B4GMN1   A0A0M4F5W0   A0A182S8A9   A0A1W4W979   Q9VDT1   B4QST3   J9K8V9   B3P075   U5ERH0   A0A1A9Z6I1   A0A1J1J5M8   A0A2J7R9D2   A0A2J7R9F2   D3TNL8   B4PNK9   U4TRD2   A0A1A9V0D8   A0A1B6DC32   Q8I157   A0A1A9YI27   A0A1B0C4K6   B4K4S0   A0A182GCL6   T1HJ19   B3LXS8   B4JT09   A0A1L8E2B4   A0A1L8E378   A0A0P4VP28   A0A1Y1M7X6   E9IJI1   A0A0P5GEL1   A0A0P5WLT9   A0A0P6BFB1   A0A1D2NJT3   A0A0P5WRD3   A0A0P6GUT6   A0A164XQW5   A0A1B0GIU4   A0A3L8DUZ4   A0A026W460   E9GLS5   A0A0N7ZAQ3   A0A195FCJ9   F4X889   A0A195DR28   A0A195BF30  

Pubmed

19121390    26385554    26354079    23622113    22118469    18362917    + More
19820115    23537049    12364791    14747013    17210077    20966253    17510324    26108605    20920257    23761445    26483478    25315136    25244985    17994087    25401762    26823975    24438588    15632085    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    20353571    17550304    12537575    27129103    28004739    21282665    27289101    30249741    24508170    21292972    21719571   

EMBL

BABH01038556    KJ622078    AID66668.1    NWSH01000035    PCG80426.1    ODYU01000178    + More
SOQ34523.1    RSAL01000051    RVE50229.1    KQ460426    KPJ14794.1    GAIX01005569    JAA86991.1    AGBW02010783    OWR47848.1    KQ458756    KPJ05223.1    GALX01005465    JAB63001.1    KQ971344    EFA05271.2    APCN01002058    AXCM01003378    APGK01055160    KB741261    ENN71561.1    AAAB01008987    EAA01272.5    CH477293    EAT44503.1    GGFK01011351    MBW44672.1    GECZ01020922    GECZ01006541    JAS48847.1    JAS63228.1    AXCN02000031    JRES01000091    KNC34207.1    ADMH02001488    ETN62356.1    JXUM01086406    JXUM01086407    KQ563565    KXJ73655.1    DS232151    EDS36141.1    UFQS01002855    UFQT01002855    SSX14769.1    SSX34161.1    GGFJ01006353    MBW55494.1    UFQS01001439    UFQT01001439    SSX10901.1    SSX30579.1    CH964251    EDW83359.1    GFDL01011015    JAV24030.1    AY190957    AAO01087.1    GBHO01034606    GBHO01025680    GBHO01025675    GBHO01025655    GBHO01025636    GBHO01005625    GDHC01019463    JAG08998.1    JAG17924.1    JAG17929.1    JAG17949.1    JAG17968.1    JAG37979.1    JAP99165.1    OUUW01000008    SPP83700.1    ATLV01015810    KE525036    KFB40792.1    GBRD01001832    GBRD01001831    JAG63990.1    CH940652    EDW59632.1    KA649723    AFP64352.1    AJVK01004271    CH480840    EDW49430.1    CM000070    EAL28883.2    CH479185    EDW38105.1    CP012526    ALC47337.1    AE014297    AY119269    AAF55709.1    AAM51129.1    CM000364    EDX12293.1    ABLF02025276    CH954181    EDV48449.1    GANO01002811    JAB57060.1    CVRI01000070    CRL07274.1    NEVH01006596    PNF37450.1    PNF37453.1    EZ423020    ADD19296.1    CM000160    EDW96072.1    KB631024    KB631053    ERL84019.1    ERL84047.1    GEDC01023714    GEDC01023145    GEDC01014059    GEDC01006095    JAS13584.1    JAS14153.1    JAS23239.1    JAS31203.1    AY190960    AAO01112.1    JXJN01025526    CH933806    EDW16073.1    JXUM01009662    KQ560288    KXJ83246.1    ACPB03006494    CH902617    EDV41735.1    CH916373    EDV94899.1    GFDF01001201    JAV12883.1    GFDF01001139    JAV12945.1    GDKW01001847    JAI54748.1    GEZM01039896    JAV81108.1    GL763802    EFZ19288.1    GDIQ01249301    JAK02424.1    GDIP01084396    JAM19319.1    GDIP01015571    JAM88144.1    LJIJ01000022    ODN05497.1    GDIP01082593    JAM21122.1    GDIQ01028522    JAN66215.1    LRGB01000944    KZS14477.1    AJWK01017657    QOIP01000004    RLU23709.1    KK107459    EZA50391.1    GL732551    EFX79557.1    GDRN01095577    JAI59488.1    KQ981673    KYN38365.1    GL888932    EGI57190.1    KQ980581    KYN15267.1    KQ976500    KYM83186.1   

Proteomes

UP000005204    UP000218220    UP000283053    UP000053240    UP000007151    UP000053268    + More
UP000007266    UP000076407    UP000075840    UP000075883    UP000075903    UP000019118    UP000075902    UP000007062    UP000075881    UP000075882    UP000008820    UP000075900    UP000075885    UP000069272    UP000075886    UP000037069    UP000000673    UP000069940    UP000249989    UP000002320    UP000075920    UP000095301    UP000075880    UP000095300    UP000076408    UP000075884    UP000007798    UP000268350    UP000030765    UP000008792    UP000092462    UP000001292    UP000001819    UP000008744    UP000092553    UP000075901    UP000192221    UP000000803    UP000000304    UP000007819    UP000008711    UP000092445    UP000183832    UP000235965    UP000002282    UP000030742    UP000078200    UP000092443    UP000092460    UP000009192    UP000015103    UP000007801    UP000001070    UP000094527    UP000076858    UP000092461    UP000279307    UP000053097    UP000000305    UP000078541    UP000007755    UP000078492    UP000078540   

PRIDE

H9JUC7    Q9VDT1   

Pfam

PF02770   Acyl-CoA_dh_M        + More
PF00441   Acyl-CoA_dh_1
PF02771   Acyl-CoA_dh_N
PF08028   Acyl-CoA_dh_2
PF00883   Peptidase_M17
PF02789   Peptidase_M17_N

Interpro

IPR006091   Acyl-CoA_Oxase/DH_cen-dom        + More
IPR009100   AcylCoA_DH/oxidase_NM_dom       
IPR009075   AcylCo_DH/oxidase_C       
IPR006089   Acyl-CoA_DH_CS       
IPR013786   AcylCoA_DH/ox_N       
IPR037069   AcylCoA_DH/ox_N_sf       
IPR036250   AcylCo_DH-like_C       
IPR013107   Acyl-CoA_DH_C_dom       
IPR000819   Peptidase_M17_C       
IPR008283   Peptidase_M17_N       
IPR011356   Leucine_aapep/pepB       

SUPFAM

SSF56645   SSF56645        + More
SSF47203   SSF47203       

Gene 3D

1.10.540.10    

CDD

cd00433  Peptidase_M17

ProteinModelPortal

H9JUC7   A0A068FL57   A0A2A4K8V0   A0A2H1V0Y7   A0A3S2LN21   A0A0N1IPD1   + More
S4P5F9   A0A212F271   A0A194QI36   V5I817   D2A4V5   A0A182XBG8   A0A182I0A8   A0A182MPT9   A0A182VKN3   N6TTA1   A0A182TPS4   Q7PYI1   A0A182JR73   A0A182KLX6   Q17DJ8   A0A182RXK0   A0A182PQV0   A0A182F884   A0A2M4AVD0   A0A1B6FF77   A0A1S4F6S3   A0A182Q2T6   A0A0L0CPT7   W5JE72   A0A182GT73   B0WWP9   A0A182VR31   A0A1I8N4U0   A0A182JK17   A0A1I8P8R5   A0A336MX34   A0A182YG93   A0A2M4BR67   A0A1Y9H2B2   A0A336MN59   B4NGE2   A0A1Q3F8Y5   Q8I184   A0A0A9XD73   A0A3B0K6K4   A0A084VS48   A0A0K8TFV8   B4M4S1   T1PP05   A0A1B0D978   B4IHR3   Q294T1   B4GMN1   A0A0M4F5W0   A0A182S8A9   A0A1W4W979   Q9VDT1   B4QST3   J9K8V9   B3P075   U5ERH0   A0A1A9Z6I1   A0A1J1J5M8   A0A2J7R9D2   A0A2J7R9F2   D3TNL8   B4PNK9   U4TRD2   A0A1A9V0D8   A0A1B6DC32   Q8I157   A0A1A9YI27   A0A1B0C4K6   B4K4S0   A0A182GCL6   T1HJ19   B3LXS8   B4JT09   A0A1L8E2B4   A0A1L8E378   A0A0P4VP28   A0A1Y1M7X6   E9IJI1   A0A0P5GEL1   A0A0P5WLT9   A0A0P6BFB1   A0A1D2NJT3   A0A0P5WRD3   A0A0P6GUT6   A0A164XQW5   A0A1B0GIU4   A0A3L8DUZ4   A0A026W460   E9GLS5   A0A0N7ZAQ3   A0A195FCJ9   F4X889   A0A195DR28   A0A195BF30  

PDB

1JQI     E-value=8.47208e-150,     Score=1360

KEGG

101743734    K00248 butyryl-CoA dehydrogenase [EC:1.3.8.1] | (RefSeq) short-chain specific acyl-CoA dehydrogenase

PATHWAY

00071    Fatty acid degradation - Bombyx mori (domestic silkworm)
00280    Valine, leucine and isoleucine degradation - Bombyx mori (domestic silkworm)
00410    beta-Alanine metabolism - Bombyx mori (domestic silkworm)
00640    Propanoate metabolism - Bombyx mori (domestic silkworm)
00650    Butanoate metabolism - Bombyx mori (domestic silkworm)
01100    Metabolic pathways - Bombyx mori (domestic silkworm)
01200    Carbon metabolism - Bombyx mori (domestic silkworm)
01212    Fatty acid metabolism - Bombyx mori (domestic silkworm)

GO

GO:0050660   GO:0003995   GO:0016491   GO:0046359   GO:0004085   GO:0005739   GO:0030145   GO:0005737   GO:0008235   GO:0004177   GO:0016627   GO:0008152   GO:0005488   GO:0008565   GO:0015031   GO:0009258   GO:0016155   GO:0003824   GO:0055114  

PANTHER

PTHR11963  

Length:

408

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.04216

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00387

outside

1  -  408

 

 

Pi

213.795328

Theta

177.542506

Tajima's D

0.577513

CLR

0.122552

CSRT

0.539023048847558

Interpretation

Uncertain