SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO09816  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA013120
Annotation
Arp2/3_complex_subunit_[Bombyx_mori]
Full name
Actin-related protein 2/3 complex subunit 3      
Location in the cell
Nuclear   Reliability : 2.449
 

Sequence

CDS
ATGCCTGCCTACCATTCAACGTTAACTGACTACAGTCAAACAGTTGGGAATCTTGCAATCTTACCACTTCGAACTTCGTTCAGAGGCCCCGCCCCAACGAGCTCCGATATTGAGTTGGATATAATAGATGAAGCGCTGAACTATTTTAAAGCAAATGTATTTTTTAGATTTTATGAAATAAAGTCTGATGCTGACAGAGTTTTAATTTACCTAACATTATATGTATCGGAATGTCTCAAAAGACTGCAGAAGTGTTCCAGCAAAAATCAAGGTCAACAAGAGATGTACATGTTGGCTATATCCAAGTTTGACATTCCTGGGGAACCAGGTTTCCCGCTCAACTCCGTATATGCCAGGCCTACCAGTCAGCAAGAATCTGATTTAATGAGGCAGTATTTACAACAATTGAGACATGAGACTGGGACAAGAGTGTGCGAGAAAGTATTTGCCACTGAAGATGGAAAACCAAGCAAGTGGTGGCTCTGCTTTTCCAGAAGGAAATTCATGGATAAATCTTTGTCTGGCCCTGGACAGTAA
Protein
MPAYHSTLTDYSQTVGNLAILPLRTSFRGPAPTSSDIELDIIDEALNYFKANVFFRFYEIKSDADRVLIYLTLYVSECLKRLQKCSSKNQGQQEMYMLAISKFDIPGEPGFPLNSVYARPTSQQESDLMRQYLQQLRHETGTRVCEKVFATEDGKPSKWWLCFSRRKFMDKSLSGPGQ

Summary

Description
Functions as component of the Arp2/3 complex which is involved in regulation of actin polymerization and together with an activating nucleation-promoting factor (NPF) mediates the formation of branched actin networks.
Subunit
Component of the Arp2/3 complex.
Similarity
Belongs to the ARPC3 family.
Feature
chain  Actin-related protein 2/3 complex subunit 3
EMBL
DQ888703    ABI36602.1    RSAL01000051    RVE50230.1    GU356595    ODYU01000178    + More
ADB27912.1    SOQ34524.1    AGBW02010783    OWR47829.1    NWSH01000035    PCG80425.1    AK401493    BAM18115.1    GDQN01004449    JAT86605.1    KQ458756    KPJ05224.1    GAIX01000050    JAA92510.1    DQ440234    CH477305    ABF18267.1    EAT44134.1    GAPW01004948    JAC08650.1    DS232303    EDS39496.1    GFDL01002501    JAV32544.1    KK852685    KDR18492.1    AXCN02000249    GGFM01003532    MBW24283.1    AXCM01000026    AAAB01008987    EAA01620.5    APCN01000909    PYGN01000753    PSN41295.1    ADMH02001371    ETN62782.1    GECZ01005049    JAS64720.1    GECU01035845    JAS71861.1    AJVK01012024    AJVK01012025    GAMD01002668    JAA98922.1    GGFM01007291    MBW28042.1    GGFK01005637    MBW38958.1    GGFJ01009869    MBW59010.1    GBXI01009606    JAD04686.1    GANO01000804    JAB59067.1    GEBQ01019472    JAT20505.1    GFDF01000119    JAV13965.1    GECL01001927    JAP04197.1    GFTR01002924    JAW13502.1    CH940652    EDW59486.1    GAKP01000710    JAC58242.1    GBYB01009204    JAG78971.1    CCAG010018011    EZ423206    ADD19482.1    GDHF01029893    JAI22421.1    GBGD01003191    JAC85698.1    GAMC01005338    GAMC01005336    GAMC01005332    JAC01220.1    GDAI01000016    JAI17587.1    JRES01001243    KNC24359.1    GDKW01001424    JAI55171.1    ACPB03017243    GAHY01001417    JAA76093.1    GBHO01017475    GBHO01006093    GBRD01016960    GDHC01014926    JAG26129.1    JAG37511.1    JAG48867.1    JAQ03703.1    EF639101    ABR27986.1    CVRI01000057    CRL02461.1    CH964272    EDW85106.1    CH933806    EDW14122.1    JXJN01017120    CM000070    EDY68264.1    CH479182    EDW34128.1    CH902617    EDV43542.1    GEDC01012119    JAS25179.1    CP012526    ALC45874.1    CH916369    EDV93413.1    CM000364    EDX12767.1    CH480815    EDW41997.1    AE014297    BT132882    AAF55233.4    AEV23906.1    JTDY01004963    KOB67543.1    CM000160    EDW97402.1    CH954181    EDV49065.1    GFDG01001708    JAV17091.1    JH431872    KK854028    PTY09777.1    GFXV01006682    MBW18487.1    OUUW01000008    SPP84269.1    GGMR01003040    MBY15659.1    GL732643    EFX69025.1    GGMS01011565    MBY80768.1    ABLF02021937    DS235850    EEB18691.1    MH712870    AYN64377.1    GDIP01141513    JAL62201.1    JXUM01059570    JXUM01077280    KQ562998    KQ562060    KXJ74679.1    KXJ76783.1    UFQT01001311    SSX29947.1    GDIQ01245561    JAK06164.1    KZ288269    PBC29934.1    LNIX01000006    OXA52567.1    KQ435824    KOX72186.1    UFQT01003405    SSX34971.1   
Pfam
PF04062   P21-Arc
Interpro
IPR007204   ARPC3        + More
IPR036753   ARPC3_sf       
SUPFAM
SSF69060   SSF69060       
Gene 3D
PDB
6DEC     E-value=7.94603e-68,     Score=648

Ontologies

Topology

Subcellular location
  
Length:
178
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00575999999999999
Exp number, first 60 AAs:
0.00269
Total prob of N-in:
0.09905
outside
1  -  178
 
 

Population Genetic Test Statistics

Pi
170.853954
Theta
184.999757
Tajima's D
-0.362314
CLR
450.349566
CSRT
0.27933603319834
Interpretation
Uncertain
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