Gene

KWMTBOMO09815  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA013141

Annotation

PREDICTED:_coiled-coil_domain-containing_protein_86_[Amyelois_transitella]

Location

Bomo_Chr16(-):9785030-9785928      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 3.032

CDS

ATGGCTGATGAAACGCAGGCGAAGGTGTCTTCAATTGTCACAGATATTACAAAGTCTCGGGATAAATACAAAGAGGTCACAATAGCAAATAATGCGCCCGTTCTAAGCGAGAAAAGAAAGCAGGAGAAGGGGAAAACAATCAGAGGTATCCCAAAATCTGGCAGGTTCTGGAAGTCTAAAAAAGAAAAATTCTCGACCATTAATAAAACAAAAGGTCTCAAACAAGACTTTTCCAAGAAAACGGCATTGAGATTGGAACTAAAGCGAACTAAGGAGTTATCTAAGCAGGCTCTTGAACAATTGAAAGAAAAAGAACTTAGCCGTAAAGAAAGGCGGCGTCAGAATTTGAAAAAGGCAGAGGAGAACAGAAAGAAATCAGAAGTAGTTCAAGTAATAACAAACACGACAAAACTTAAGAGAATGAGAAAGAAACAACTTAGATTCATTGAGAAACGAGACACTAATAAGGAAGTTGAAAGTAGTAAATAA

Protein

MADETQAKVSSIVTDITKSRDKYKEVTIANNAPVLSEKRKQEKGKTIRGIPKSGRFWKSKKEKFSTINKTKGLKQDFSKKTALRLELKRTKELSKQALEQLKEKELSRKERRRQNLKKAEENRKKSEVVQVITNTTKLKRMRKKQLRFIEKRDTNKEVESSK

Uniprot

H9JUC8   A0A1E1WQS7   A0A0L7KWN3   A0A0N1IPL0   A0A194QP17   A0A2A4K932   + More
A0A437BIH9   A0A2H1V102   S4Q0C3   A0A212FJ27   F4WI91   A0A151WPP6   A0A158NZS6   E2BR55   A0A195F3L3   A0A151JPR8   A0A195CM51   A0A0J7KPF4   E9ISW2   D6WSN0   A0A0N0U3L8   A0A154P9Y1   K7JX20   W8BMZ4   A0A0A1X1J4   A0A1E1WYR1   A0A182YDW9   A0A1E1XS83   A0A195BEI7   A0A1B6GSF0   A0A3B0KRQ7   A0A3B1JIR2   A0A0F8B0E8   A0A3Q1EUG7   A0A3P8T7X5  

Pubmed

19121390    26227816    26354079    23622113    22118469    21719571    + More
21347285    20798317    21282665    18362917    19820115    20075255    24495485    25830018    28503490    25244985    29209593    25329095    25835551   

EMBL

BABH01038557    GDQN01001777    JAT89277.1    JTDY01004963    KOB67545.1    KQ460426    + More
KPJ14796.1    KQ458756    KPJ05226.1    NWSH01000035    PCG80424.1    RSAL01000051    RVE50231.1    ODYU01000178    SOQ34525.1    GAIX01000038    JAA92522.1    AGBW02008320    OWR53757.1    GL888175    EGI66022.1    KQ982860    KYQ49787.1    ADTU01004973    GL449898    EFN81861.1    KQ981856    KYN34674.1    KQ978709    KYN29089.1    KQ977580    KYN01785.1    LBMM01004607    KMQ92243.1    GL765434    EFZ16338.1    KQ971354    EFA05893.1    KQ435885    KOX69558.1    KQ434839    KZC08028.1    GAMC01008172    JAB98383.1    GBXI01009657    JAD04635.1    GFAC01007029    JAT92159.1    GFAA01001262    JAU02173.1    KQ976511    KYM82602.1    GECZ01004486    JAS65283.1    OUUW01000020    SPP89339.1    KQ042123    KKF18821.1   

Proteomes

UP000005204    UP000037510    UP000053240    UP000053268    UP000218220    UP000283053    + More
UP000007151    UP000007755    UP000075809    UP000005205    UP000008237    UP000078541    UP000078492    UP000078542    UP000036403    UP000007266    UP000053105    UP000076502    UP000002358    UP000076408    UP000078540    UP000268350    UP000018467    UP000257200    UP000265080   

PRIDE

H9JUC8   

Pfam

PF03879   Cgr1

Interpro

IPR005579   Cgr1-like        + More
IPR026570   CCDC86       

ProteinModelPortal

H9JUC8   A0A1E1WQS7   A0A0L7KWN3   A0A0N1IPL0   A0A194QP17   A0A2A4K932   + More
A0A437BIH9   A0A2H1V102   S4Q0C3   A0A212FJ27   F4WI91   A0A151WPP6   A0A158NZS6   E2BR55   A0A195F3L3   A0A151JPR8   A0A195CM51   A0A0J7KPF4   E9ISW2   D6WSN0   A0A0N0U3L8   A0A154P9Y1   K7JX20   W8BMZ4   A0A0A1X1J4   A0A1E1WYR1   A0A182YDW9   A0A1E1XS83   A0A195BEI7   A0A1B6GSF0   A0A3B0KRQ7   A0A3B1JIR2   A0A0F8B0E8   A0A3Q1EUG7   A0A3P8T7X5  

KEGG

101744082    K14822 rRNA-processing protein CGR1 | (RefSeq) coiled-coil domain-containing protein 86

GO

PANTHER

PTHR13557  

Length:

162

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0

Exp number, first 60 AAs:

0

Total prob of N-in:

0.29800

outside

1  -  162

 

 

Pi

82.734645

Theta

138.232158

Tajima's D

-1.089087

CLR

353.123049

CSRT

0.121393930303485

Interpretation

Uncertain