SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO09811  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA013142
Annotation
PREDICTED:_oxysterol-binding_protein_1_[Papilio_polytes]
Full name
Oxysterol-binding protein      
Location in the cell
Cytoplasmic   Reliability : 1.513
 

Sequence

CDS
ATGTCTGAAGCAATTGTGCCTAAAGGTCAACCGATACCCGGGGATCCTGAAAAAAAAGGATGGCTTTTCAAATGGACGAATTACCTAAAAGGATATCAACGAAGGTGGTTCGTGTTGTCCAACGGATTATTATCCTACTACAGGAACCAAGCAGAAATGGCGCATACGTGTAGAGGAACTATTTCACTGCTCGGTGCTCTTATTCACACTGCTGATTCATGTACTTTTGTCATCAGCAATGGTGGCACACAGACATTCTACATTAAAGCTCATGATGAAGTAGAACGTCAGAGTTGGGTTACAGCCCTAGAATTGGCCAAGGCTAAAGCTATTCGAGCTCAAGAATCAGACGATGATGAAGACCAGGTGGCATCTGGAGCAGTAGTAATTGGTGGGGCTGGTGAAGGTGAAGGAGAAGACACTGGCGGCATTGCAAGAGAACTGGCAGCAAGATTTCATGACCTGCGTACCTGTTCAGAATTAGTAGCAAGACATGGAACAGCACTACAGAGATCACTTGTTGACTTGGAAATACCACCTTCGGATACAACGAAGCAAGTTTCCGAACGAGCGACACTCTTTAGAATATCCTGCAATGCAATGATGAATGCTTGTTCTGAGTTTATGAGCGCAGCAGCCGGATCAAGCGCACGACTTTCGCGAGCTTTGCAACACGAGCGAGAACAGAAGCTCCGTCTACAGGAGGTGGTTGAACAACTCGCTAGACAACATGATACGCTCGAAAAGACGGTCACGGCACGCTCCACCCCGCACACAGGTGGTAACGGGACAACTCAAGGCAACGAAACTGAGGATGAAGACCATGAATTCTTTGACGCAGTGGAGGAGGGCATCTCAACCAACATGGATGATAAGACTTCATTTGTAATTAAAGTACCAGTTAATAGAAAAAACAAAGTGAAGGACGGTGAAAGTTCGGATGAATCAGAAGGTGAAACAGTGACAGAAACACAACAGGTGATATTTGTGGAGGATAAGGAGCGAGCGGAGAGCGCGATGGGAGGCGCCGACGGAAGCACCACACCGTCGCTTCCGGCCAAAGACACCGACATTGTCGTCTGGGAGCTGTCGAAGATCCCTATCCCGGTGAACTTCAGCGAGCCGCTGTCGATGCTGCAGCGGCTGACGGAGGACTACGAGTACTCGTCGGTGCTGGACCAGGCCGCCAAGTTCGATGACCCCGCGCAGCAACTCGCCTACGTCGCCGCATTCACAGTCTCCTCGTACGCGACCACCGCGTGCCGGACAAACAAACCGTTCAATCCTCTGCTCGGCGAGACGTTCGAATGCGACCGCATGGCCGACCTCGGCTGGCGAGCCATCTCCGAACAGGTGTCGCATCACCCGCCGATGGTGGCGCAGTTCTGCGAGGGCACGTCGGGCTGGCAGTGCTGGCAGGAGTTCACCATGACCACCAAGTTCCGGGGGAAGTACCTCCAGATCATACCGCTCGGAGCCGCCTCCGCCAAGTTCCTCGCGCACGGAAACAAGTACACCTGGAGGAAGGTGACCACCACCGTCCACAATATCATTGTGGGCAAGCTGTGGGTCGATAACCACGGCGACATGGACATCGTGGGCGACGCCGGCCCGGCTACTGGGTACGTCGCGCACCTCAAGTACCTGCCCTACGGGTACTTCAGCAAAGACACGCAACGAAAAGTGACGGGCGTTGTCAAGGATCCCAACGGCGTGCCGAGGTACGTGCTACAAGGTCACTGGGACAGCCGCGTGGAGGTGGCCCCCGTCACGAGCACGTCGGCCGACAACTCCGTCTGCAAGACCGGCAAGTTCGTGACGGCGTGGCAGCGCGTGGCCGCCCCGCCCGACTCCGACAAGTGGTACAACTTCACCGTGCTCGCCGCGCAACTCAACGAGCCCGAGCCCGGCGTCGCGCCCACCGACTCGCGGCTGCGCCCCGACCAGCGCCTCATGGAGGAGGGCTGCTGGGACGAGGCCAACACGGAGAAGCTGCGCCTCGAGGAGAAGCAGCGGGGGGCGCGGCGCCGGCTGGAGGCGGAGGCCGAGGCGGCGGCCGCGCGCGGGCTGTCCGCCCCCGCCGCCCCGCCCCCGCTCTGGTTCACGAGGGACGCGCAGCCCGGCGCCGGGAACACGCTGCGCCACCTCTACAACCACCGCTACTGGGACTGCAAGCGCCGCCAGGACTGGACCGGCTGCCCGGATATTTTCTAG
Protein
MSEAIVPKGQPIPGDPEKKGWLFKWTNYLKGYQRRWFVLSNGLLSYYRNQAEMAHTCRGTISLLGALIHTADSCTFVISNGGTQTFYIKAHDEVERQSWVTALELAKAKAIRAQESDDDEDQVASGAVVIGGAGEGEGEDTGGIARELAARFHDLRTCSELVARHGTALQRSLVDLEIPPSDTTKQVSERATLFRISCNAMMNACSEFMSAAAGSSARLSRALQHEREQKLRLQEVVEQLARQHDTLEKTVTARSTPHTGGNGTTQGNETEDEDHEFFDAVEEGISTNMDDKTSFVIKVPVNRKNKVKDGESSDESEGETVTETQQVIFVEDKERAESAMGGADGSTTPSLPAKDTDIVVWELSKIPIPVNFSEPLSMLQRLTEDYEYSSVLDQAAKFDDPAQQLAYVAAFTVSSYATTACRTNKPFNPLLGETFECDRMADLGWRAISEQVSHHPPMVAQFCEGTSGWQCWQEFTMTTKFRGKYLQIIPLGAASAKFLAHGNKYTWRKVTTTVHNIIVGKLWVDNHGDMDIVGDAGPATGYVAHLKYLPYGYFSKDTQRKVTGVVKDPNGVPRYVLQGHWDSRVEVAPVTSTSADNSVCKTGKFVTAWQRVAAPPDSDKWYNFTVLAAQLNEPEPGVAPTDSRLRPDQRLMEEGCWDEANTEKLRLEEKQRGARRRLEAEAEAAAARGLSAPAAPPPLWFTRDAQPGAGNTLRHLYNHRYWDCKRRQDWTGCPDIF

Summary

Similarity
Belongs to the OSBP family.
Feature
chain  Oxysterol-binding protein
EMBL
ODYU01000178    SOQ34529.1    NWSH01000035    PCG80420.1    RSAL01000051    RVE50235.1    + More
KQ458756    KPJ05232.1    AGBW02008320    OWR53753.1    GGFL01005428    MBW69606.1    GGFL01005427    MBW69605.1    GGFL01005429    MBW69607.1    JF309337    AEP20464.1    GFDL01013063    JAV21982.1    GFDL01013025    JAV22020.1    GFDL01013016    JAV22029.1    GFDF01002565    JAV11519.1    GDAI01000204    JAI17399.1    DS231900    EDS44823.1    AAAB01008823    EAA05572.4    AXCN02002119    JF309338    AEP20465.1    GFDL01013020    JAV22025.1    GGFJ01002625    MBW51766.1    GFDF01006639    JAV07445.1    GGFM01001657    MBW22408.1    GGFK01002189    MBW35510.1    GGFK01002202    MBW35523.1    KK853478    KDR07319.1    UFQS01001753    UFQT01001753    SSX12221.1    SSX31673.1    GGFL01002604    MBW66782.1    ATLV01012414    ATLV01012415    ATLV01012416    ATLV01012417    ATLV01012418    ATLV01012419    KE524791    KFB36733.1    GGFM01001592    MBW22343.1    AJWK01007082    AJWK01007083    AJWK01007084    AJWK01007085    AJWK01007086    AJWK01007087    AJWK01007088    AJWK01007089    AJWK01007090    GGFM01001589    MBW22340.1    GGFK01002178    MBW35499.1    GEHC01000253    JAV47392.1    GGFK01001993    MBW35314.1    ADMH02001239    ETN63541.1    GBBI01003050    JAC15662.1    GBHO01039827    GBHO01032464    GDHC01005420    JAG03777.1    JAG11140.1    JAQ13209.1    GECL01001895    JAP04229.1    GAMC01011880    JAB94675.1    GBGD01000597    JAC88292.1    GFTR01007916    JAW08510.1    GDHF01016533    GDHF01015739    JAI35781.1    JAI36575.1    GBXI01011111    GBXI01009807    JAD03181.1    JAD04485.1    KQ971357    EFA08460.1    GBYB01000079    JAG69846.1    GALX01003979    JAB64487.1    CVRI01000042    CRK95590.1    GFDL01001411    JAV33634.1    GFDL01001410    JAV33635.1    KQ978081    KYM97144.1    GALX01003981    JAB64485.1    GBYB01000080    JAG69847.1    GACK01003330    JAA61704.1    CH964272    EDW84731.1    GFJQ02004454    JAW02516.1    GL438820    EFN68395.1    KQ979608    KYN20493.1    GEZM01097815    JAV54090.1    GFWV01002231    MAA26961.1    GACK01003479    JAA61555.1    ABJB010048453    ABJB010089118    ABJB010095854    ABJB010104490    ABJB010457929    DS881486    EEC15047.1    GGLE01001675    MBY05801.1    CM000160    EDW98859.1    GFPF01010393    MAA21539.1    KQ976691    KYM77895.1    GEDV01006969    JAP81588.1    GDIP01094233    JAM09482.1    GANP01006225    JAB78243.1    GDIQ01203345    LRGB01002451    JAK48380.1    KZS07572.1    GFDL01001408    JAV33637.1    CP012526    ALC46441.1    DS235221    EEB13460.1    CH940650    EDW67762.1    CH933806    EDW16470.1    CH954182    EDV53771.1    GL732536    EFX83705.1    AE014297    AY129448    AAF56371.1    AAM76190.1    CM000364    EDX14315.1    CH480815    EDW43583.1    CM000070    EAL27621.1    KQ981965    KYN31817.1    GDIP01144627    GDIQ01203346    JAJ78775.1    JAK48379.1    Y13951    CAA74289.1    CH479179    EDW24907.1    CH902617    EDV43837.1    GDIP01233023    JAI90378.1    AMQM01002786    KB095858    ESO10964.1    CRK95589.1    LNIX01000006    OXA52983.1   
Pfam
PF01237   Oxysterol_BP        + More
PF00169   PH
PF00069   Pkinase
PF14438   SM-ATX
PF06741   LsmAD
Interpro
IPR001849   PH_domain        + More
IPR011993   PH-like_dom_sf       
IPR000648   Oxysterol-bd       
IPR037239   OSBP_sf       
IPR018494   Oxysterol-bd_CS       
IPR008271   Ser/Thr_kinase_AS       
IPR011009   Kinase-like_dom_sf       
IPR017441   Protein_kinase_ATP_BS       
IPR000719   Prot_kinase_dom       
IPR009604   LsmAD_domain       
IPR025852   SM_dom_ATX       
SUPFAM
SSF144000   SSF144000        + More
SSF56112   SSF56112       
Gene 3D
PDB
5ZM7     E-value=2.71378e-49,     Score=496

Ontologies

Topology

Length:
737
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.13693
Exp number, first 60 AAs:
0.01233
Total prob of N-in:
0.00519
outside
1  -  737
 
 

Population Genetic Test Statistics

Pi
197.600127
Theta
175.56977
Tajima's D
-1.751203
CLR
13.186955
CSRT
0.031998400079996
Interpretation
Possibly Positive selection
Peptides ×
Source Sequence Identity Evalue
28556443 VLLELK 100.00 3e-05
26822097 GISAPAAPPPIWFTR 100.00 0.019
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